| Definition | Chlorobium phaeobacteroides DSM 266 chromosome, complete genome. |
|---|---|
| Accession | NC_008639 |
| Length | 3,133,902 |
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The map label for this gene is 119357989
Identifier: 119357989
GI number: 119357989
Start: 2537900
End: 2538577
Strand: Direct
Name: 119357989
Synonym: Cpha266_2209
Alternate gene names: NA
Gene position: 2537900-2538577 (Clockwise)
Preceding gene: 119357988
Following gene: 119357998
Centisome position: 80.98
GC content: 39.38
Gene sequence:
>678_bases ATGGGCTCTGATAATATTTTTTATAAACGCAAACAGAGACAAGCGGCGTCTCTGGAGCGGAAAAATCCCAAAAAATCGTC CTATGACAGGGTGCTTATCGTCTGTGAAGGTGAAAAGACTGAACCACACTACTTTAAAGAGATATGCGACACCTACAAGC TAAGCACTGCTAATGTTGATATTTGTGGAAAAGAGTGCGGTTCTGATCCGCTCAGTGTAGTTAATTACGCTATCGCAAAA TTTAATAAAGACACAGATTATGATCGTGTTTATTGCGTGATTGACAGAGATAAGCACATAACCTTCAATGATGCAATGAT TCTGTTGCGCGACAAGAAACTGGGCGAAGAAGTTATTTTTAAGGCGATAATATCAGCGCCCTGTTTCGAATTTTGGTTAC TGCTGCATTTCATCTATACGACAAGGCCATTCTGTGCTCAAGGGAAGGCATCGAACTGTGAGCTGGTATTGAAAGAATTA AATAAAAAAGGTCGACTTCCGAGCTATAGCAAGGGTGCCAATAACATTTTTGCCTTGACAAATGAAAAACTTATTGAGGC AATGAAACGGGCTAACCAGTTACAAAATCACAACCATAATACTGATTCCAATAACCCAGCAACAAACATGCACGAGCTGG TAGAATACCTAATCAATCTTAAAAAAAATTGTTGCTGA
Upstream 100 bases:
>100_bases CGCTGTCTGACTTTACCCCACGAAAAAATGAGGCTCTGGAAAAAGGATATCTAAATGGACGATACGGTGCTATTCCATAC ATTGGCGAAATAAGGTTCTG
Downstream 100 bases:
>100_bases TTATTTATATGTGCGTTGTGAGGCTCACAGCAATTCCACTGCCGAACATTCGTTTTGCACATATGTAATTCCTTGTCAGC AACAAGGCGTTTTGCTTTTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 225; Mature: 224
Protein sequence:
>225_residues MGSDNIFYKRKQRQAASLERKNPKKSSYDRVLIVCEGEKTEPHYFKEICDTYKLSTANVDICGKECGSDPLSVVNYAIAK FNKDTDYDRVYCVIDRDKHITFNDAMILLRDKKLGEEVIFKAIISAPCFEFWLLLHFIYTTRPFCAQGKASNCELVLKEL NKKGRLPSYSKGANNIFALTNEKLIEAMKRANQLQNHNHNTDSNNPATNMHELVEYLINLKKNCC
Sequences:
>Translated_225_residues MGSDNIFYKRKQRQAASLERKNPKKSSYDRVLIVCEGEKTEPHYFKEICDTYKLSTANVDICGKECGSDPLSVVNYAIAK FNKDTDYDRVYCVIDRDKHITFNDAMILLRDKKLGEEVIFKAIISAPCFEFWLLLHFIYTTRPFCAQGKASNCELVLKEL NKKGRLPSYSKGANNIFALTNEKLIEAMKRANQLQNHNHNTDSNNPATNMHELVEYLINLKKNCC >Mature_224_residues GSDNIFYKRKQRQAASLERKNPKKSSYDRVLIVCEGEKTEPHYFKEICDTYKLSTANVDICGKECGSDPLSVVNYAIAKF NKDTDYDRVYCVIDRDKHITFNDAMILLRDKKLGEEVIFKAIISAPCFEFWLLLHFIYTTRPFCAQGKASNCELVLKELN KKGRLPSYSKGANNIFALTNEKLIEAMKRANQLQNHNHNTDSNNPATNMHELVEYLINLKKNCC
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25891; Mature: 25760
Theoretical pI: Translated: 8.53; Mature: 8.53
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.4 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 6.2 %Cys+Met (Translated Protein) 4.5 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 5.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGSDNIFYKRKQRQAASLERKNPKKSSYDRVLIVCEGEKTEPHYFKEICDTYKLSTANVD CCCCCCHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHCCCCCCEE ICGKECGSDPLSVVNYAIAKFNKDTDYDRVYCVIDRDKHITFNDAMILLRDKKLGEEVIF ECCHHHCCCHHHHHHHHHHHCCCCCCCCEEEEEEECCCEEEECCEEEEEECCCCCHHHHH KAIISAPCFEFWLLLHFIYTTRPFCAQGKASNCELVLKELNKKGRLPSYSKGANNIFALT HHHHHCHHHHHHHHHHHHHHCCCHHCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCEEEEC NEKLIEAMKRANQLQNHNHNTDSNNPATNMHELVEYLINLKKNCC CHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHCCC >Mature Secondary Structure GSDNIFYKRKQRQAASLERKNPKKSSYDRVLIVCEGEKTEPHYFKEICDTYKLSTANVD CCCCCHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHCCCCCCEE ICGKECGSDPLSVVNYAIAKFNKDTDYDRVYCVIDRDKHITFNDAMILLRDKKLGEEVIF ECCHHHCCCHHHHHHHHHHHCCCCCCCCEEEEEEECCCEEEECCEEEEEECCCCCHHHHH KAIISAPCFEFWLLLHFIYTTRPFCAQGKASNCELVLKELNKKGRLPSYSKGANNIFALT HHHHHCHHHHHHHHHHHHHHCCCHHCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCEEEEC NEKLIEAMKRANQLQNHNHNTDSNNPATNMHELVEYLINLKKNCC CHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA