| Definition | Chlorobium phaeobacteroides DSM 266 chromosome, complete genome. |
|---|---|
| Accession | NC_008639 |
| Length | 3,133,902 |
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The map label for this gene is 119357949
Identifier: 119357949
GI number: 119357949
Start: 2505679
End: 2506536
Strand: Reverse
Name: 119357949
Synonym: Cpha266_2164
Alternate gene names: NA
Gene position: 2506536-2505679 (Counterclockwise)
Preceding gene: 119357957
Following gene: 119357948
Centisome position: 79.98
GC content: 48.83
Gene sequence:
>858_bases ATGGGCATCTTTTTTGTCCAACTTGGTGAACGCTATAACCGTAACGGTATGAATGAACGGGTGATGGTGAAAATGTTTCT TTCCCTTTCGACACTCCTTTTTATTGCGGAGCTGGTTGTAGGGCTGTTTTATCAGGCCGATCTGCGGCTGATGGTTTTGT TTTTTATGCTCGCGGTGTCCCTTGCCGGTATTCTTGTTTCCCTGAAGATGCTTCTCGGAGAAAAGCAGGAGGTTGAATCG GTTTCCATGCGTCGAAGAAGGGCTCTGGATGATGAGGTCATGAAGGATGTTCTTGACGGGTATGAGGTTGATGAGGAGTT TTTAGGCAATGTTTCCCGAAAGGGAAAAAAGAGAGGGGGTTCAGGAGCGGTTCGGGAACAAAACATATCTGCGGGGGCGA GTGGAGCAAAAGACGAATCTTCTCTCGAAGATGCAATCAGGTCACACGCTGTTATGTTCGGCGGACTTGAAAAGTTGCTT GACGCCTTAACAGAGGTTGACGAGCTCTCTTTCGGAAAAATGATGGAAAAAGCCGGAATTCAAGGGGTGGCAAGAGGCGA GGTTATCGTTCAGATACAGACCATGGTTGACCTCGAACAGCGGTCGTGCGGTGAGTTGCTGAAAAGAACGGAGGACTCCC TTTCAGAAGGTCTGTCGCTCGACAAGGAGAGTTTTGACGAATATATCCGCAGGTGCATGACTACCAGCGAGTCTGAATCG GCTCCGGTAAGTACAACCTTTTCTCTGGATCTTGATATGGCGGCCATGTCAAAGCAGGACGGTACGCCCCCGAAAGATTT TTCCCACGCACCCGAGGCTGTGTTTTCAAAGCTGAAAAAGCCTGGAAAAGAGGTATGA
Upstream 100 bases:
>100_bases GTGCCATAATTGAACAATAAGCATTAAATTTGGCGAAAAGGGAGTTCGATAAACGAGGAGCGAATGATCGAAAATCCCGG AAATTCTGTTATTCTCCCTC
Downstream 100 bases:
>100_bases CTTCGAGTGATCTTAATCCGTTAAGCAAGGTGAAGCTGCGCAGGTTTGTTAAGCTTCAGGAAAAAAAGTATCGGGACCAG GATGGGCTGTTTCTTGCTGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 285; Mature: 284
Protein sequence:
>285_residues MGIFFVQLGERYNRNGMNERVMVKMFLSLSTLLFIAELVVGLFYQADLRLMVLFFMLAVSLAGILVSLKMLLGEKQEVES VSMRRRRALDDEVMKDVLDGYEVDEEFLGNVSRKGKKRGGSGAVREQNISAGASGAKDESSLEDAIRSHAVMFGGLEKLL DALTEVDELSFGKMMEKAGIQGVARGEVIVQIQTMVDLEQRSCGELLKRTEDSLSEGLSLDKESFDEYIRRCMTTSESES APVSTTFSLDLDMAAMSKQDGTPPKDFSHAPEAVFSKLKKPGKEV
Sequences:
>Translated_285_residues MGIFFVQLGERYNRNGMNERVMVKMFLSLSTLLFIAELVVGLFYQADLRLMVLFFMLAVSLAGILVSLKMLLGEKQEVES VSMRRRRALDDEVMKDVLDGYEVDEEFLGNVSRKGKKRGGSGAVREQNISAGASGAKDESSLEDAIRSHAVMFGGLEKLL DALTEVDELSFGKMMEKAGIQGVARGEVIVQIQTMVDLEQRSCGELLKRTEDSLSEGLSLDKESFDEYIRRCMTTSESES APVSTTFSLDLDMAAMSKQDGTPPKDFSHAPEAVFSKLKKPGKEV >Mature_284_residues GIFFVQLGERYNRNGMNERVMVKMFLSLSTLLFIAELVVGLFYQADLRLMVLFFMLAVSLAGILVSLKMLLGEKQEVESV SMRRRRALDDEVMKDVLDGYEVDEEFLGNVSRKGKKRGGSGAVREQNISAGASGAKDESSLEDAIRSHAVMFGGLEKLLD ALTEVDELSFGKMMEKAGIQGVARGEVIVQIQTMVDLEQRSCGELLKRTEDSLSEGLSLDKESFDEYIRRCMTTSESESA PVSTTFSLDLDMAAMSKQDGTPPKDFSHAPEAVFSKLKKPGKEV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31524; Mature: 31393
Theoretical pI: Translated: 4.71; Mature: 4.71
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 5.6 %Met (Translated Protein) 6.3 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 5.3 %Met (Mature Protein) 6.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGIFFVQLGERYNRNGMNERVMVKMFLSLSTLLFIAELVVGLFYQADLRLMVLFFMLAVS CCEEEEEHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LAGILVSLKMLLGEKQEVESVSMRRRRALDDEVMKDVLDGYEVDEEFLGNVSRKGKKRGG HHHHHHHHHHHHCCHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCHHHHHHHHHHHHCCCC SGAVREQNISAGASGAKDESSLEDAIRSHAVMFGGLEKLLDALTEVDELSFGKMMEKAGI CCCCHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC QGVARGEVIVQIQTMVDLEQRSCGELLKRTEDSLSEGLSLDKESFDEYIRRCMTTSESES CCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCC APVSTTFSLDLDMAAMSKQDGTPPKDFSHAPEAVFSKLKKPGKEV CCCEEEEEECHHHHHHHCCCCCCCCCCCCCHHHHHHHHHCCCCCC >Mature Secondary Structure GIFFVQLGERYNRNGMNERVMVKMFLSLSTLLFIAELVVGLFYQADLRLMVLFFMLAVS CEEEEEHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LAGILVSLKMLLGEKQEVESVSMRRRRALDDEVMKDVLDGYEVDEEFLGNVSRKGKKRGG HHHHHHHHHHHHCCHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCHHHHHHHHHHHHCCCC SGAVREQNISAGASGAKDESSLEDAIRSHAVMFGGLEKLLDALTEVDELSFGKMMEKAGI CCCCHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC QGVARGEVIVQIQTMVDLEQRSCGELLKRTEDSLSEGLSLDKESFDEYIRRCMTTSESES CCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCC APVSTTFSLDLDMAAMSKQDGTPPKDFSHAPEAVFSKLKKPGKEV CCCEEEEEECHHHHHHHCCCCCCCCCCCCCHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA