| Definition | Chlorobium phaeobacteroides DSM 266 chromosome, complete genome. |
|---|---|
| Accession | NC_008639 |
| Length | 3,133,902 |
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The map label for this gene is 119357931
Identifier: 119357931
GI number: 119357931
Start: 2483667
End: 2484323
Strand: Reverse
Name: 119357931
Synonym: Cpha266_2146
Alternate gene names: NA
Gene position: 2484323-2483667 (Counterclockwise)
Preceding gene: 119357932
Following gene: 119357930
Centisome position: 79.27
GC content: 47.49
Gene sequence:
>657_bases ATGGCTGCATTTGATTTTGGTATAAAAGTTGATCCGGCACCGTTTGATCGCCAGATCAATGAAGGGTATCAGGTAAATAT TTCAGACTATGTCCGTCAGGGCTGGGAGATGTTTCAAAAGAACATCGGTGAATTTATCGGTTTTACGCTTGTTGTTTTTG TGATTTCAGCGCTGTCCGCAAGGATGAATGCTTTTGGTTCGATTATTTTTTCCGCTCTTGCGGCGTCACTCTATGCCGGC TATAGTATTGTTGCCTTTAAGCGGCTTATCGGTCAGGAGATTCAGTTCTCAGACTTTTTCAAGGGCTTCAATTACTTTCT TCCTCTTTTTCTTGCCGGCCTGGCCAGCGGTCTGTTGGTAAGTCTCGGCATTGTGCTGCTTGTCATACCAGGCATTTATC TCGCAGTGAGTTATGTGTTCGTTACCTTTCTGATTATTGATCACCGTATGGATTTCTGGCAGGCGATGGAAATCAGCCGC AAGATCATAACAAAGGAGTGGTTTGCCGTTTTCGGTCTTGCACTTGCCCTGTTTGCCATCAATCTGCTTGGAGTTCTTGC TCTTGGTGTCGGGTTGCTTGTCAGCGCGCCGGTTACGGCCTGCGCCGCGGCGATAGCCTACAAGGATATTGTCGGCTTGC ACGCGTCTGAGTGGTAG
Upstream 100 bases:
>100_bases GATACGAAACGCTCGTACCATCGATAGCCGTTCTCTTGGGAGGCCGGTTTCCGTTAAAGCAAGTGATCATATTTATTCAT TGAACAATAAGGAGATAGCA
Downstream 100 bases:
>100_bases TTGATGATCGACGGTTTACATTTTCGATAAACAAGATAAGGTACCCCTATGAAAACAAGACTGTTGTTTGTATGCATCTG GTTATTTGTCGTGATGACAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 218; Mature: 217
Protein sequence:
>218_residues MAAFDFGIKVDPAPFDRQINEGYQVNISDYVRQGWEMFQKNIGEFIGFTLVVFVISALSARMNAFGSIIFSALAASLYAG YSIVAFKRLIGQEIQFSDFFKGFNYFLPLFLAGLASGLLVSLGIVLLVIPGIYLAVSYVFVTFLIIDHRMDFWQAMEISR KIITKEWFAVFGLALALFAINLLGVLALGVGLLVSAPVTACAAAIAYKDIVGLHASEW
Sequences:
>Translated_218_residues MAAFDFGIKVDPAPFDRQINEGYQVNISDYVRQGWEMFQKNIGEFIGFTLVVFVISALSARMNAFGSIIFSALAASLYAG YSIVAFKRLIGQEIQFSDFFKGFNYFLPLFLAGLASGLLVSLGIVLLVIPGIYLAVSYVFVTFLIIDHRMDFWQAMEISR KIITKEWFAVFGLALALFAINLLGVLALGVGLLVSAPVTACAAAIAYKDIVGLHASEW >Mature_217_residues AAFDFGIKVDPAPFDRQINEGYQVNISDYVRQGWEMFQKNIGEFIGFTLVVFVISALSARMNAFGSIIFSALAASLYAGY SIVAFKRLIGQEIQFSDFFKGFNYFLPLFLAGLASGLLVSLGIVLLVIPGIYLAVSYVFVTFLIIDHRMDFWQAMEISRK IITKEWFAVFGLALALFAINLLGVLALGVGLLVSAPVTACAAAIAYKDIVGLHASEW
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23951; Mature: 23819
Theoretical pI: Translated: 5.73; Mature: 5.73
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAAFDFGIKVDPAPFDRQINEGYQVNISDYVRQGWEMFQKNIGEFIGFTLVVFVISALSA CCCCCCCCCCCCCCCCHHHCCCCEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RMNAFGSIIFSALAASLYAGYSIVAFKRLIGQEIQFSDFFKGFNYFLPLFLAGLASGLLV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH SLGIVLLVIPGIYLAVSYVFVTFLIIDHRMDFWQAMEISRKIITKEWFAVFGLALALFAI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH NLLGVLALGVGLLVSAPVTACAAAIAYKDIVGLHASEW HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure AAFDFGIKVDPAPFDRQINEGYQVNISDYVRQGWEMFQKNIGEFIGFTLVVFVISALSA CCCCCCCCCCCCCCCHHHCCCCEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RMNAFGSIIFSALAASLYAGYSIVAFKRLIGQEIQFSDFFKGFNYFLPLFLAGLASGLLV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH SLGIVLLVIPGIYLAVSYVFVTFLIIDHRMDFWQAMEISRKIITKEWFAVFGLALALFAI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH NLLGVLALGVGLLVSAPVTACAAAIAYKDIVGLHASEW HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA