| Definition | Chlorobium phaeobacteroides DSM 266 chromosome, complete genome. |
|---|---|
| Accession | NC_008639 |
| Length | 3,133,902 |
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The map label for this gene is 119357932
Identifier: 119357932
GI number: 119357932
Start: 2484641
End: 2485279
Strand: Reverse
Name: 119357932
Synonym: Cpha266_2147
Alternate gene names: NA
Gene position: 2485279-2484641 (Counterclockwise)
Preceding gene: 119357935
Following gene: 119357931
Centisome position: 79.3
GC content: 46.17
Gene sequence:
>639_bases ATGCCCCTCAAGGATGGTTATGGCGTACTTATTGGTACGATGCACAGTTGTTTGTGCGATCAATCACATCAGAAGGGTTC TTATTATCACTGTAATCTGAAAGTAAGGGTCGGACGTTCGCTTTTTCGATGCCCTATCGACCTTGACAGTAAACAAACCG CAGACGGCGTACAGTGGAGAGTTATAAAGCCTGAACAACGGGCATATAAAAAATTCTTGCGTTACCCTGACGGGTGGCAT GAGTTATCTTCTACCCCTCATTCCGGCGCGCTTGACTATTACCGGAGCAAAGCGCTGAAGCCGACACAAGCGTGTGTTGA TGCAGTTGAATATATTACAGTCGAAAACGGCAGTGACAGATTTGACCATGCAGAATCTCCCTGGAAAAACGGAACAGGTG TTGTTGCATTTGGCGATCTGGAACCGTATCTCAAAAAGGCCGTACGGGTTTTTGTTTTTGGCGAACCGTTTCGGAATGGA AAAGGGGTTCATAATATTCATCAGAATCAGGGCGATCCGCCTGAAAGTCGCTGGGCGCAAGAAAACGGAATATGGCAGGA TGGAGGCGTCATGGTTCTTGAAAAAAATCTTGTTGTGACGGCTTTTTTATGCAAGTTTCGAACGCAGCGTTTTTTCTGA
Upstream 100 bases:
>100_bases AATAAATATGTATTGATGCAGCATTTTTTGTGACCAGATGGCGTTATGCTTAACTTTCTTGTGGTAAGTGTTTTTCAAAC AGGATAGTCAAGGAACTTCG
Downstream 100 bases:
>100_bases TCCGGGAGAGGCGATGATTTCGTTCGCTGTTGTAGCCTCAAAGCAGGGAACAAGTTGTGTGCATCAGGTTCAGCGGCAGA AGATTTTCGAAGAGATTCTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 212; Mature: 211
Protein sequence:
>212_residues MPLKDGYGVLIGTMHSCLCDQSHQKGSYYHCNLKVRVGRSLFRCPIDLDSKQTADGVQWRVIKPEQRAYKKFLRYPDGWH ELSSTPHSGALDYYRSKALKPTQACVDAVEYITVENGSDRFDHAESPWKNGTGVVAFGDLEPYLKKAVRVFVFGEPFRNG KGVHNIHQNQGDPPESRWAQENGIWQDGGVMVLEKNLVVTAFLCKFRTQRFF
Sequences:
>Translated_212_residues MPLKDGYGVLIGTMHSCLCDQSHQKGSYYHCNLKVRVGRSLFRCPIDLDSKQTADGVQWRVIKPEQRAYKKFLRYPDGWH ELSSTPHSGALDYYRSKALKPTQACVDAVEYITVENGSDRFDHAESPWKNGTGVVAFGDLEPYLKKAVRVFVFGEPFRNG KGVHNIHQNQGDPPESRWAQENGIWQDGGVMVLEKNLVVTAFLCKFRTQRFF >Mature_211_residues PLKDGYGVLIGTMHSCLCDQSHQKGSYYHCNLKVRVGRSLFRCPIDLDSKQTADGVQWRVIKPEQRAYKKFLRYPDGWHE LSSTPHSGALDYYRSKALKPTQACVDAVEYITVENGSDRFDHAESPWKNGTGVVAFGDLEPYLKKAVRVFVFGEPFRNGK GVHNIHQNQGDPPESRWAQENGIWQDGGVMVLEKNLVVTAFLCKFRTQRFF
Specific function: Unknown
COG id: COG5634
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24158; Mature: 24026
Theoretical pI: Translated: 8.77; Mature: 8.77
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.8 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 2.8 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPLKDGYGVLIGTMHSCLCDQSHQKGSYYHCNLKVRVGRSLFRCPIDLDSKQTADGVQWR CCCCCCCHHHHHHHHHHHHCCCCCCCCEEEEEEEEEECCHHHCCCCCCCCCCCCCCEEEE VIKPEQRAYKKFLRYPDGWHELSSTPHSGALDYYRSKALKPTQACVDAVEYITVENGSDR EECCHHHHHHHHHCCCCCHHHHCCCCCCCHHHHHHHHCCCHHHHHHHHHHEEEECCCCCC FDHAESPWKNGTGVVAFGDLEPYLKKAVRVFVFGEPFRNGKGVHNIHQNQGDPPESRWAQ CCCCCCCCCCCCEEEEECCCCHHHHHHEEEEEECCCCCCCCCCCCHHCCCCCCCHHHHHH ENGIWQDGGVMVLEKNLVVTAFLCKFRTQRFF HCCCCCCCCEEEEECCHHHHHHHHHHHHHCCC >Mature Secondary Structure PLKDGYGVLIGTMHSCLCDQSHQKGSYYHCNLKVRVGRSLFRCPIDLDSKQTADGVQWR CCCCCCHHHHHHHHHHHHCCCCCCCCEEEEEEEEEECCHHHCCCCCCCCCCCCCCEEEE VIKPEQRAYKKFLRYPDGWHELSSTPHSGALDYYRSKALKPTQACVDAVEYITVENGSDR EECCHHHHHHHHHCCCCCHHHHCCCCCCCHHHHHHHHCCCHHHHHHHHHHEEEECCCCCC FDHAESPWKNGTGVVAFGDLEPYLKKAVRVFVFGEPFRNGKGVHNIHQNQGDPPESRWAQ CCCCCCCCCCCCEEEEECCCCHHHHHHEEEEEECCCCCCCCCCCCHHCCCCCCCHHHHHH ENGIWQDGGVMVLEKNLVVTAFLCKFRTQRFF HCCCCCCCCEEEEECCHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA