| Definition | Chlorobium phaeobacteroides DSM 266 chromosome, complete genome. |
|---|---|
| Accession | NC_008639 |
| Length | 3,133,902 |
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The map label for this gene is 119357918
Identifier: 119357918
GI number: 119357918
Start: 2462270
End: 2463271
Strand: Direct
Name: 119357918
Synonym: Cpha266_2131
Alternate gene names: NA
Gene position: 2462270-2463271 (Clockwise)
Preceding gene: 119357915
Following gene: 119357919
Centisome position: 78.57
GC content: 51.6
Gene sequence:
>1002_bases ATGCCGAGAGGAGCGAGGCTTGATGCGCCGGATGCGTTGCATCACGTCATGGTTCGTGGGATCGAGCGATCCGATATTGT TTTTAACGATGGAGATCGGCTTGATTTCCTGAACAGGATTGACAAAGCAGCTCAAAAAACCGGAACCGTCATCTATGCCT GGGCACTGATGACCAATCATGCGCATCTTTTACTCAGAAGCGGTTCAGCCGGGTTGCCAACCTTCATGCGTAAAGTGCTG ACCGGGTATTCGACATCGTTCAACAAACGGCATCATCGATCAGGTCACCTCTTCCAGAACCGGTACAAATCGATTCTCTG TGAAGAGGAGCCATATTTCGTCAAGTTGGTGAGCTATATCCATCTGAATCCCTTGCGCGCCCGGTTAGTCTCTTCTCTGG AAGAACTGCAACATTATCCGTGGAGCGGGCATACTGCAATCATGGGTTTTGCTGAACATCCATGGCACCATACGGAATAT GTGTTGCAACAGTTCGGCAGAACAGTTGGTAATGCACGAATGGCTTATCTGGAATTCGTACGTGAACAAAACCAGCTAGG ACGTCAGCCTGAGTTGACGGGTGGTGGACTGATACGCTCTGCCGGCGGATGGTCTGAAGTGCTGTCTATGAGACGGCGAG GTGAGCGTCAGTTCAGCGACGAACGGATACTGGGTAGCGGAGAGTTCGTCGAAGAGGTGCTCGGAGATGTTGATGATGAT CGGAAGTCAATGATGCCTGCACGGTTGAGACTTGCTGAGGCCCGCGACCTGATCGAACGGGAGTGCATCGAAAAAGGATT ATCGGTCGAGGCATTGCAGTGCGGAAGCAGAAGCAATGAATACAAGGCTCTCCGGCATGATGCCGCCAGGAAACTTGTTT GCGGGTTGGGCTTGTCCCATGCTGATATTGCACGACTACTCGGAATTTCGAGATCAGGCGTCAGCCAGATGCTTCGCCGC TATTCTGACATAAGTTCCACTCATAGAGCCGAACGAGACTGA
Upstream 100 bases:
>100_bases ACTGATGGAATACAAAACCAAAACAAATCCTGTTTTGTATTATATTTGTAAAATATCCCGTTGATACTTTTGTCTGTCAA ACAAAAGCGGAGAGAATGGT
Downstream 100 bases:
>100_bases TTGTACCTGATGAAGCAGGGATAATGCGCCTTTCATATCCTTTTTGCCCTCACGCGTTCCCTCAGTCACTTACGTCCCTT ACGTCCCCCTCACCCCCCGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 333; Mature: 332
Protein sequence:
>333_residues MPRGARLDAPDALHHVMVRGIERSDIVFNDGDRLDFLNRIDKAAQKTGTVIYAWALMTNHAHLLLRSGSAGLPTFMRKVL TGYSTSFNKRHHRSGHLFQNRYKSILCEEEPYFVKLVSYIHLNPLRARLVSSLEELQHYPWSGHTAIMGFAEHPWHHTEY VLQQFGRTVGNARMAYLEFVREQNQLGRQPELTGGGLIRSAGGWSEVLSMRRRGERQFSDERILGSGEFVEEVLGDVDDD RKSMMPARLRLAEARDLIERECIEKGLSVEALQCGSRSNEYKALRHDAARKLVCGLGLSHADIARLLGISRSGVSQMLRR YSDISSTHRAERD
Sequences:
>Translated_333_residues MPRGARLDAPDALHHVMVRGIERSDIVFNDGDRLDFLNRIDKAAQKTGTVIYAWALMTNHAHLLLRSGSAGLPTFMRKVL TGYSTSFNKRHHRSGHLFQNRYKSILCEEEPYFVKLVSYIHLNPLRARLVSSLEELQHYPWSGHTAIMGFAEHPWHHTEY VLQQFGRTVGNARMAYLEFVREQNQLGRQPELTGGGLIRSAGGWSEVLSMRRRGERQFSDERILGSGEFVEEVLGDVDDD RKSMMPARLRLAEARDLIERECIEKGLSVEALQCGSRSNEYKALRHDAARKLVCGLGLSHADIARLLGISRSGVSQMLRR YSDISSTHRAERD >Mature_332_residues PRGARLDAPDALHHVMVRGIERSDIVFNDGDRLDFLNRIDKAAQKTGTVIYAWALMTNHAHLLLRSGSAGLPTFMRKVLT GYSTSFNKRHHRSGHLFQNRYKSILCEEEPYFVKLVSYIHLNPLRARLVSSLEELQHYPWSGHTAIMGFAEHPWHHTEYV LQQFGRTVGNARMAYLEFVREQNQLGRQPELTGGGLIRSAGGWSEVLSMRRRGERQFSDERILGSGEFVEEVLGDVDDDR KSMMPARLRLAEARDLIERECIEKGLSVEALQCGSRSNEYKALRHDAARKLVCGLGLSHADIARLLGISRSGVSQMLRRY SDISSTHRAERD
Specific function: Unknown
COG id: COG1943
COG function: function code L; Transposase and inactivated derivatives
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37866; Mature: 37734
Theoretical pI: Translated: 9.31; Mature: 9.31
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPRGARLDAPDALHHVMVRGIERSDIVFNDGDRLDFLNRIDKAAQKTGTVIYAWALMTNH CCCCCCCCCHHHHHHHHHHCCCCCCCEECCCCHHHHHHHHHHHHHHCCCEEEEHHHHHCC AHLLLRSGSAGLPTFMRKVLTGYSTSFNKRHHRSGHLFQNRYKSILCEEEPYFVKLVSYI CEEEEECCCCCCHHHHHHHHHHCCCHHHHHHCCCCHHHHHHHHHHHCCCCCHHHHHHHHH HLNPLRARLVSSLEELQHYPWSGHTAIMGFAEHPWHHTEYVLQQFGRTVGNARMAYLEFV HCCHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH REQNQLGRQPELTGGGLIRSAGGWSEVLSMRRRGERQFSDERILGSGEFVEEVLGDVDDD HHHHHCCCCCCCCCCCCEECCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCCCH RKSMMPARLRLAEARDLIERECIEKGLSVEALQCGSRSNEYKALRHDAARKLVCGLGLSH HHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCH ADIARLLGISRSGVSQMLRRYSDISSTHRAERD HHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure PRGARLDAPDALHHVMVRGIERSDIVFNDGDRLDFLNRIDKAAQKTGTVIYAWALMTNH CCCCCCCCHHHHHHHHHHCCCCCCCEECCCCHHHHHHHHHHHHHHCCCEEEEHHHHHCC AHLLLRSGSAGLPTFMRKVLTGYSTSFNKRHHRSGHLFQNRYKSILCEEEPYFVKLVSYI CEEEEECCCCCCHHHHHHHHHHCCCHHHHHHCCCCHHHHHHHHHHHCCCCCHHHHHHHHH HLNPLRARLVSSLEELQHYPWSGHTAIMGFAEHPWHHTEYVLQQFGRTVGNARMAYLEFV HCCHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH REQNQLGRQPELTGGGLIRSAGGWSEVLSMRRRGERQFSDERILGSGEFVEEVLGDVDDD HHHHHCCCCCCCCCCCCEECCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCCCH RKSMMPARLRLAEARDLIERECIEKGLSVEALQCGSRSNEYKALRHDAARKLVCGLGLSH HHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCH ADIARLLGISRSGVSQMLRRYSDISSTHRAERD HHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA