| Definition | Chlorobium phaeobacteroides DSM 266 chromosome, complete genome. |
|---|---|
| Accession | NC_008639 |
| Length | 3,133,902 |
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The map label for this gene is yuxK [H]
Identifier: 119357906
GI number: 119357906
Start: 2451741
End: 2452172
Strand: Reverse
Name: yuxK [H]
Synonym: Cpha266_2114
Alternate gene names: 119357906
Gene position: 2452172-2451741 (Counterclockwise)
Preceding gene: 119357908
Following gene: 119357905
Centisome position: 78.25
GC content: 50.69
Gene sequence:
>432_bases ATGCATAAGTCCTTTGCCGCTCTTCCTGATAACATTGTCATTTTTGATGGTGTCTGCAATCTGTGCGAATTTTCGGTGAA TTTTATTTTTGAGCACAATACCGCCGGGCAGTTCTCTTTCACGCCAGCCCAGTCTCCTCTTGGATCTTCTTTACTCCGCC ATTTCGGTATCAACACTTCGCGACTTGACACCGTTGTTCTTGTCAGGGGTGACCGCGCCTTCACCCGTAGTGCCGCAGCC ATTGAAATCGCCTCCGGACTCGACATGCCGTGGAATCTGCTCACCGTTTTCCAGGCGGTTCCCGAACCCTTGCGGGATAT GCTGTATGATCTGATAGCGATGAACCGGTATCAGCTGTTCGGAAAAAAAGAGGAATGCATGTTACCGTCCGAAGAGTTGC GCAGGCGTTTTCTCGAGCAACTGCCGGGATAA
Upstream 100 bases:
>100_bases CTATCCGGAACTCCGGGCTTAATGGACTCGGTGGATGCATGTTGCGACGTACCCTGTCAGGAAGTCTTCGATGCAATCGT GAACGTTACCTTGAAACCGG
Downstream 100 bases:
>100_bases TGATCCATCGCAAGGGGTATGCCGTGCCTCGGGGGAGTTGCCCACGAATTACACGAATTTGCACGAAAGGAAATTGGCAG TTGGTTTTCTCTGGCTTCGC
Product: putative thiol-disulfide oxidoreductase DCC
Products: NA
Alternate protein names: ORF2 [H]
Number of amino acids: Translated: 143; Mature: 143
Protein sequence:
>143_residues MHKSFAALPDNIVIFDGVCNLCEFSVNFIFEHNTAGQFSFTPAQSPLGSSLLRHFGINTSRLDTVVLVRGDRAFTRSAAA IEIASGLDMPWNLLTVFQAVPEPLRDMLYDLIAMNRYQLFGKKEECMLPSEELRRRFLEQLPG
Sequences:
>Translated_143_residues MHKSFAALPDNIVIFDGVCNLCEFSVNFIFEHNTAGQFSFTPAQSPLGSSLLRHFGINTSRLDTVVLVRGDRAFTRSAAA IEIASGLDMPWNLLTVFQAVPEPLRDMLYDLIAMNRYQLFGKKEECMLPSEELRRRFLEQLPG >Mature_143_residues MHKSFAALPDNIVIFDGVCNLCEFSVNFIFEHNTAGQFSFTPAQSPLGSSLLRHFGINTSRLDTVVLVRGDRAFTRSAAA IEIASGLDMPWNLLTVFQAVPEPLRDMLYDLIAMNRYQLFGKKEECMLPSEELRRRFLEQLPG
Specific function: Unknown
COG id: COG3011
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the DCC thiol-disulfide oxidoreductase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007263 [H]
Pfam domain/function: PF04134 DUF393 [H]
EC number: NA
Molecular weight: Translated: 16142; Mature: 16142
Theoretical pI: Translated: 5.65; Mature: 5.65
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 5.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHKSFAALPDNIVIFDGVCNLCEFSVNFIFEHNTAGQFSFTPAQSPLGSSLLRHFGINTS CCCCCCCCCCCEEEECCHHHHHHHHHHEEEECCCCCCEEECCCCCCHHHHHHHHHCCCCC RLDTVVLVRGDRAFTRSAAAIEIASGLDMPWNLLTVFQAVPEPLRDMLYDLIAMNRYQLF CCEEEEEEECCCHHHHHHHHEECCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHC GKKEECMLPSEELRRRFLEQLPG CCCCCCCCCHHHHHHHHHHHCCC >Mature Secondary Structure MHKSFAALPDNIVIFDGVCNLCEFSVNFIFEHNTAGQFSFTPAQSPLGSSLLRHFGINTS CCCCCCCCCCCEEEECCHHHHHHHHHHEEEECCCCCCEEECCCCCCHHHHHHHHHCCCCC RLDTVVLVRGDRAFTRSAAAIEIASGLDMPWNLLTVFQAVPEPLRDMLYDLIAMNRYQLF CCEEEEEEECCCHHHHHHHHEECCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHC GKKEECMLPSEELRRRFLEQLPG CCCCCCCCCHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7961491; 9274030; 9384377 [H]