| Definition | Chlorobium phaeobacteroides DSM 266 chromosome, complete genome. |
|---|---|
| Accession | NC_008639 |
| Length | 3,133,902 |
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The map label for this gene is 119357905
Identifier: 119357905
GI number: 119357905
Start: 2450962
End: 2451255
Strand: Reverse
Name: 119357905
Synonym: Cpha266_2113
Alternate gene names: NA
Gene position: 2451255-2450962 (Counterclockwise)
Preceding gene: 119357906
Following gene: 119357904
Centisome position: 78.22
GC content: 50.0
Gene sequence:
>294_bases ATGAGCGAAAAGCAACGCAAAAGTTTTACGGCACAATTCAAGGCCAAAGTGGCGCTTGAGGCAATCAGGGGCGAAAAAAC CCTAAACGAAATCGGTCGGGAATTTGGTATCCACCCGAATCTGGTTGGGCAATGGAAGCGTGAGGTTCAAGAGCATGCGG ACGGTCTCTTTGAGGCCAAGCGCGGCCCGAAGCCGGTCGATCCACTTGCAGATCCGGAAAAGCTTTATGCTGAAATAGGT CGGCTCAAAGTTGAGTTGAGTTGGCTCAAAAAAAAAGTCGATCCGTACCTATGA
Upstream 100 bases:
>100_bases CAACTCAGAAAAAGCCATGGGCGCCTCTTTTTTTCTGTAGTGGCCCCCGATTTTCAGACAAGTGTTTAAGGTGGTAACTT GCCCAAAAAAGGGACAAGTT
Downstream 100 bases:
>100_bases AAGCGCGTAAAAGCTGGATCAGCGACAAGGGACCGTTGTCGGTATCGACCCAATGTGAACTTGCCGGAGTAACCCGGTCA GGGTACTACGGGCAAAGCAA
Product: transposase IS3/IS911 family protein
Products: NA
Alternate protein names: Transposase IS3/IS; Transposase IS3/; Transposase IS3 Family
Number of amino acids: Translated: 97; Mature: 96
Protein sequence:
>97_residues MSEKQRKSFTAQFKAKVALEAIRGEKTLNEIGREFGIHPNLVGQWKREVQEHADGLFEAKRGPKPVDPLADPEKLYAEIG RLKVELSWLKKKVDPYL
Sequences:
>Translated_97_residues MSEKQRKSFTAQFKAKVALEAIRGEKTLNEIGREFGIHPNLVGQWKREVQEHADGLFEAKRGPKPVDPLADPEKLYAEIG RLKVELSWLKKKVDPYL >Mature_96_residues SEKQRKSFTAQFKAKVALEAIRGEKTLNEIGREFGIHPNLVGQWKREVQEHADGLFEAKRGPKPVDPLADPEKLYAEIGR LKVELSWLKKKVDPYL
Specific function: Unknown
COG id: COG2963
COG function: function code L; Transposase and inactivated derivatives
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11129; Mature: 10998
Theoretical pI: Translated: 10.07; Mature: 10.07
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSEKQRKSFTAQFKAKVALEAIRGEKTLNEIGREFGIHPNLVGQWKREVQEHADGLFEAK CCCHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHC RGPKPVDPLADPEKLYAEIGRLKVELSWLKKKVDPYL CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure SEKQRKSFTAQFKAKVALEAIRGEKTLNEIGREFGIHPNLVGQWKREVQEHADGLFEAK CCHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHC RGPKPVDPLADPEKLYAEIGRLKVELSWLKKKVDPYL CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA