| Definition | Chlorobium phaeobacteroides DSM 266 chromosome, complete genome. |
|---|---|
| Accession | NC_008639 |
| Length | 3,133,902 |
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The map label for this gene is yafE [C]
Identifier: 119357901
GI number: 119357901
Start: 2446469
End: 2447359
Strand: Reverse
Name: yafE [C]
Synonym: Cpha266_2109
Alternate gene names: 119357901
Gene position: 2447359-2446469 (Counterclockwise)
Preceding gene: 119357904
Following gene: 119357900
Centisome position: 78.09
GC content: 52.41
Gene sequence:
>891_bases ATGTCAAACAACACCTTGGTTGGTTTTTTTGCATATCTCAACTGGCTTCTCAATCCATTCCACGGACTGGAGACTACTGA AGTCTATGATCTGATTGGCACCACCGCTCTTACCGAGCACAGGCTGTATCTGAATCTTGGCTACTGGCGGGATGCGGATA CCATTGATGAGGCCAGTGAAGCGCTTGCTCTTCTGGTGGCGGAACGGGGCGGTATGGCTGCTGGTGATGTGGTGCTGGAT TGCGGGTATGGTTTCGGCGACCAGGATATCCTCTGGGCCAGGAGCATGAAACCTGAAAAAATCATCGGTCTGAATATCAC AAGGTCTCAGGTTGAACGGGCCCGGATGCATGTTGCGGATGCAGGGCTCGGGAATATGATCGATTTGAGGGAAGGTTCGG CAACAGCGATGCCGATTGCAGATGAATCCATCGATCTGGTTGTTTCTCTGGAGAGCGCTTTCCACTACAGGAGCCGCGAG GATTTTTTCAGGGAGGCGTATCGGGTGTTGCGACCGGGTGGAAGGCTGGTGACGGCCGACATTGTCCCGACCAAACACGC CGGCAATCCCTTCAGGCGGATGGAGCAATGGATTTCATGGAGTCTTGTGGCCGGTAAGTTCAATATTCCGCAGGAAAACT ACTATCTGATTCCGTCATACACCAGCAAGCTCCTGAGTGCCGGATTCGTCGGTATCGACATCAAATCAATACGCGACGAT GTCTATCGGCCTCTTCATGAGTATCTGTCAAGAGATCAGACGTTTGTAAGGAAGCTGCCTCCGGTTGCCAGGATGCTTGC AAAATCGGCATTGCATCGGTCAGCGGAGAGTGTCTACGCCGGCCTGGACTATATTCTGTCTTATGCTGAAAAGCCGGAGA AATCCGGGTGA
Upstream 100 bases:
>100_bases CAACAGGAAGCGGCATAAACAACCGGCGGGTTGCCACCTTAAATTCGACCTTATTTTGTCTGGTCGATAGGGTCCACTTC ATCCTAAAAGAATAAAAAGC
Downstream 100 bases:
>100_bases CATATGAGAACGGCGAAGTCGCTACCGACCGGCAAAGAGTTCCGCTCAGGCGATGATGGGTGTATGGTCTCAGTGATGCT TCTTATTACTGTGACATTTC
Product: methyltransferase type 11
Products: NA
Alternate protein names: Arsenite S-Adenosylmethyltransferase; Methyltransferase; SAM-Dependent Methyltransferase; UbiE/COQ5 Family Methlytransferase; Sterol-C-Methyltransferase; Delta(24)-Sterol C-Methyltransferase; Gamma-copherol Methyltransferase; Erythromycin C Methlytransferase; Staurosporine Biosynthesis Methyltransferase StaMB; McyJ Protein; NDP-Hexose 3-O-Methyltransferase; Methlytransferase
Number of amino acids: Translated: 296; Mature: 295
Protein sequence:
>296_residues MSNNTLVGFFAYLNWLLNPFHGLETTEVYDLIGTTALTEHRLYLNLGYWRDADTIDEASEALALLVAERGGMAAGDVVLD CGYGFGDQDILWARSMKPEKIIGLNITRSQVERARMHVADAGLGNMIDLREGSATAMPIADESIDLVVSLESAFHYRSRE DFFREAYRVLRPGGRLVTADIVPTKHAGNPFRRMEQWISWSLVAGKFNIPQENYYLIPSYTSKLLSAGFVGIDIKSIRDD VYRPLHEYLSRDQTFVRKLPPVARMLAKSALHRSAESVYAGLDYILSYAEKPEKSG
Sequences:
>Translated_296_residues MSNNTLVGFFAYLNWLLNPFHGLETTEVYDLIGTTALTEHRLYLNLGYWRDADTIDEASEALALLVAERGGMAAGDVVLD CGYGFGDQDILWARSMKPEKIIGLNITRSQVERARMHVADAGLGNMIDLREGSATAMPIADESIDLVVSLESAFHYRSRE DFFREAYRVLRPGGRLVTADIVPTKHAGNPFRRMEQWISWSLVAGKFNIPQENYYLIPSYTSKLLSAGFVGIDIKSIRDD VYRPLHEYLSRDQTFVRKLPPVARMLAKSALHRSAESVYAGLDYILSYAEKPEKSG >Mature_295_residues SNNTLVGFFAYLNWLLNPFHGLETTEVYDLIGTTALTEHRLYLNLGYWRDADTIDEASEALALLVAERGGMAAGDVVLDC GYGFGDQDILWARSMKPEKIIGLNITRSQVERARMHVADAGLGNMIDLREGSATAMPIADESIDLVVSLESAFHYRSRED FFREAYRVLRPGGRLVTADIVPTKHAGNPFRRMEQWISWSLVAGKFNIPQENYYLIPSYTSKLLSAGFVGIDIKSIRDDV YRPLHEYLSRDQTFVRKLPPVARMLAKSALHRSAESVYAGLDYILSYAEKPEKSG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33264; Mature: 33133
Theoretical pI: Translated: 5.92; Mature: 5.92
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSNNTLVGFFAYLNWLLNPFHGLETTEVYDLIGTTALTEHRLYLNLGYWRDADTIDEASE CCCCCEEHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCEEEEEECCCCCCCHHHHHHH ALALLVAERGGMAAGDVVLDCGYGFGDQDILWARSMKPEKIIGLNITRSQVERARMHVAD HHHHHHHHCCCCEECCEEEECCCCCCCCCEEEECCCCCCEEEEECCCHHHHHHHHHHHHC AGLGNMIDLREGSATAMPIADESIDLVVSLESAFHYRSREDFFREAYRVLRPGGRLVTAD CCCCCEEEECCCCCCCCCCCCCCEEEEEEEHHHHHHCCHHHHHHHHHHHHCCCCCEEEEE IVPTKHAGNPFRRMEQWISWSLVAGKFNIPQENYYLIPSYTSKLLSAGFVGIDIKSIRDD CCCCCCCCCHHHHHHHHHHHEEEECEECCCCCCEEECCCHHHHHHHCCCCEEEHHHHHHH VYRPLHEYLSRDQTFVRKLPPVARMLAKSALHRSAESVYAGLDYILSYAEKPEKSG HHHHHHHHHCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure SNNTLVGFFAYLNWLLNPFHGLETTEVYDLIGTTALTEHRLYLNLGYWRDADTIDEASE CCCCEEHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCEEEEEECCCCCCCHHHHHHH ALALLVAERGGMAAGDVVLDCGYGFGDQDILWARSMKPEKIIGLNITRSQVERARMHVAD HHHHHHHHCCCCEECCEEEECCCCCCCCCEEEECCCCCCEEEEECCCHHHHHHHHHHHHC AGLGNMIDLREGSATAMPIADESIDLVVSLESAFHYRSREDFFREAYRVLRPGGRLVTAD CCCCCEEEECCCCCCCCCCCCCCEEEEEEEHHHHHHCCHHHHHHHHHHHHCCCCCEEEEE IVPTKHAGNPFRRMEQWISWSLVAGKFNIPQENYYLIPSYTSKLLSAGFVGIDIKSIRDD CCCCCCCCCHHHHHHHHHHHEEEECEECCCCCCEEECCCHHHHHHHCCCCEEEHHHHHHH VYRPLHEYLSRDQTFVRKLPPVARMLAKSALHRSAESVYAGLDYILSYAEKPEKSG HHHHHHHHHCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA