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The map label for this gene is yggU [C]

Identifier: 119357873

GI number: 119357873

Start: 2414868

End: 2415173

Strand: Reverse

Name: yggU [C]

Synonym: Cpha266_2081

Alternate gene names: 119357873

Gene position: 2415173-2414868 (Counterclockwise)

Preceding gene: 119357874

Following gene: 119357872

Centisome position: 77.07

GC content: 51.96

Gene sequence:

>306_bases
ATGATGATTTCCGGCGTGGAGATCAGCGAGAAAAGCGGAAGCGCGGTTTTTCGTCTCAAGGCGCAGCCCCGATCTTCAAA
AAGCGCCATCTCCGGCGCCTACAACGGAGGGGTGAAAGTTAATCTCAAGGCAGCTCCTGTTGATGATGCTGCCAATCGCG
AGTGCTGCGATCTTTTTGCAAAAGTCCTGAGCGTTTCATCGTCGCGTCTGACCATTCTTTCCGGAAAAAGTTCTAAAAAC
AAAACCATAAAGGTAGAGGGGCTCGGTGCCGAAGAGGTTGCCCTGCTCCTGCGTCCCTATCTTTGA

Upstream 100 bases:

>100_bases
TCCGGGCTGATATCGAAAAAACTTCGATTTCGACCGATCAGGTTCTGCTGAATGCTCCGGACAGGCAGGACAGATTTTTC
AAGGTTCCTAAAGTCATCGG

Downstream 100 bases:

>100_bases
GAGGTTATTAACGCCGACAGAATGAGAGTTATCGTTCAGCGGGTGCTTTCGGCATCGGTTGCGTCCGGTGATGAGAGCGC
TGTGCATATCGGGCCTGGTC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 101; Mature: 101

Protein sequence:

>101_residues
MMISGVEISEKSGSAVFRLKAQPRSSKSAISGAYNGGVKVNLKAAPVDDAANRECCDLFAKVLSVSSSRLTILSGKSSKN
KTIKVEGLGAEEVALLLRPYL

Sequences:

>Translated_101_residues
MMISGVEISEKSGSAVFRLKAQPRSSKSAISGAYNGGVKVNLKAAPVDDAANRECCDLFAKVLSVSSSRLTILSGKSSKN
KTIKVEGLGAEEVALLLRPYL
>Mature_101_residues
MMISGVEISEKSGSAVFRLKAQPRSSKSAISGAYNGGVKVNLKAAPVDDAANRECCDLFAKVLSVSSSRLTILSGKSSKN
KTIKVEGLGAEEVALLLRPYL

Specific function: Unknown

COG id: COG1872

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0235 family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y2081_CHLPD (A1BI66)

Other databases:

- EMBL:   CP000492
- RefSeq:   YP_912517.1
- ProteinModelPortal:   A1BI66
- SMR:   A1BI66
- STRING:   A1BI66
- GeneID:   4570428
- GenomeReviews:   CP000492_GR
- KEGG:   cph:Cpha266_2081
- NMPDR:   fig|290317.7.peg.2198
- eggNOG:   NOG147741
- HOGENOM:   HBG472132
- OMA:   ISGAYNG
- ProtClustDB:   CLSK718612
- HAMAP:   MF_00634
- InterPro:   IPR003746
- Gene3D:   G3DSA:3.30.1200.10

Pfam domain/function: PF02594 DUF167; SSF69786 DUF167

EC number: NA

Molecular weight: Translated: 10615; Mature: 10615

Theoretical pI: Translated: 10.18; Mature: 10.18

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMISGVEISEKSGSAVFRLKAQPRSSKSAISGAYNGGVKVNLKAAPVDDAANRECCDLFA
CEECCCEECCCCCCEEEEEECCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCHHHHHHHH
KVLSVSSSRLTILSGKSSKNKTIKVEGLGAEEVALLLRPYL
HHHCCCCCEEEEEECCCCCCCEEEEECCCHHHHHHHHCCCC
>Mature Secondary Structure
MMISGVEISEKSGSAVFRLKAQPRSSKSAISGAYNGGVKVNLKAAPVDDAANRECCDLFA
CEECCCEECCCCCCEEEEEECCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCHHHHHHHH
KVLSVSSSRLTILSGKSSKNKTIKVEGLGAEEVALLLRPYL
HHHCCCCCEEEEEECCCCCCCEEEEECCCHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA