| Definition | Chlorobium phaeobacteroides DSM 266 chromosome, complete genome. |
|---|---|
| Accession | NC_008639 |
| Length | 3,133,902 |
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The map label for this gene is bchY [H]
Identifier: 119357867
GI number: 119357867
Start: 2409751
End: 2410989
Strand: Reverse
Name: bchY [H]
Synonym: Cpha266_2075
Alternate gene names: 119357867
Gene position: 2410989-2409751 (Counterclockwise)
Preceding gene: 119357868
Following gene: 119357864
Centisome position: 76.93
GC content: 55.37
Gene sequence:
>1239_bases ATGGAGAAACAGGATTGTAAAAATCTTCATCCGCAGTCGATGTGTCCCGCATTCGGCGGGCTGCGGGTTCTGACAAGAAT TGACGGCGTGCAGGTCTGTCTTGTAGCCGATCAGGGGTGCAGTTACGGACTCACGTTTGTCTCCCACTTCTATGCCGCGC GCAAATCCATTGTAACGCCGGAACTCATGAATGTGCAGATCTCCGGAGGCAGCATGATCGACGATGTTCGTCGTGTTATC GCCGGGATAGCCCTTGACCCCTCAGTCCGCTTTATCCCTGTTGTCTCCACCTGTGTTGCCGAAACGGCAGGTCTGGCTGA GGAGCTGCTCCCCAAAAAAGAGGGCAATGCCGAGGTGCTTCTGGTTCGTCTGCCCGCATTTCAGATCAGAACGCACCCTG AAGCCAAGGATGTTACCGTGGCAACGCTCCTGAAGCGTTTTGCCGCTTTTGATGGGCCGAAAAAGCCGAAATCGCTGGTT GTGCTTGGAGAGATTTTTCCGGTAGACGCCATGGCTATCGGCAGCGTGTTGCAGAAAATCGGCGTAGCGTCCGTCATCAC GCTGCCCGGTACCTCACTTGACGATTATATCGAATCAGGCAGAACGGAAGCCTGCGCCGTACTGCACCCCTTTTATGAAC GAACCGTATCGCTCTTTGAGAAAAACGGCGTCAGGATCGTCAAGGGAAACCCGATCGGCGCCAATGCGACGGCGCAGTGG ATACGACGGGTCGGAGAGGCGCTGCAGCTTGACCCGGCAGTGGTGGAAAGCGTTGCGGAGGAAGAGCGGCTGAAAGCGAG CGCGGTGCTCGAAAAGTTCACCCATCTGCGGGGTAAGGTCATTGTTGCCGGTTACGAAGGAAACGAGCTCCCTGTCGTGC GTCTTCTGCTCGAAGCAGGCCTTGACGTTCCCTATGCGTCTACCTCCATTTCACGCCAGCCGCTCGGAGAGGAAGATCAC AAGTTGCTCACCATGCTTGGTACGGAGATCCGGTACCGCAAGTATCTTGAAGAGGATATGCAGGCGGTTGTCGACTACGC GCCGGATCTCGTTATCGGCACCACCTCGCTCGACAGCTTTGCCAAAGAGCGGGGAATACCTGCGATCTACTATACCAACA ACATCTCCGCCCGACCGCTTTTTTTTGCAACCGGAGCAGCATCGGTGCTCGGGATGATCGGCGCTCTTCTGTCGAAAAAA GAGGTGTTCATGAAGATGAAGGAGTACTTTACCGAATAG
Upstream 100 bases:
>100_bases TACGGGAGCGGGAACGAGGCAAAAGCCGGAATGAAATCGCTCGCTCAAGGCCTTGCCCGGGATGCCGCTTTGCAGGAAAT AACAAAAAGGTATGAACTTC
Downstream 100 bases:
>100_bases CGGAACGTTGAAGCGGTAAACGGCAGCCTCAACTGCCATAAAAGGAGCGCCGGGCAGGGTGAACTGATTACAGGAGGGCG GAAAAAACACCGATAGCAGA
Product: chlorophyllide reductase subunit Y
Products: NA
Alternate protein names: Chlorin reductase [H]
Number of amino acids: Translated: 412; Mature: 412
Protein sequence:
>412_residues MEKQDCKNLHPQSMCPAFGGLRVLTRIDGVQVCLVADQGCSYGLTFVSHFYAARKSIVTPELMNVQISGGSMIDDVRRVI AGIALDPSVRFIPVVSTCVAETAGLAEELLPKKEGNAEVLLVRLPAFQIRTHPEAKDVTVATLLKRFAAFDGPKKPKSLV VLGEIFPVDAMAIGSVLQKIGVASVITLPGTSLDDYIESGRTEACAVLHPFYERTVSLFEKNGVRIVKGNPIGANATAQW IRRVGEALQLDPAVVESVAEEERLKASAVLEKFTHLRGKVIVAGYEGNELPVVRLLLEAGLDVPYASTSISRQPLGEEDH KLLTMLGTEIRYRKYLEEDMQAVVDYAPDLVIGTTSLDSFAKERGIPAIYYTNNISARPLFFATGAASVLGMIGALLSKK EVFMKMKEYFTE
Sequences:
>Translated_412_residues MEKQDCKNLHPQSMCPAFGGLRVLTRIDGVQVCLVADQGCSYGLTFVSHFYAARKSIVTPELMNVQISGGSMIDDVRRVI AGIALDPSVRFIPVVSTCVAETAGLAEELLPKKEGNAEVLLVRLPAFQIRTHPEAKDVTVATLLKRFAAFDGPKKPKSLV VLGEIFPVDAMAIGSVLQKIGVASVITLPGTSLDDYIESGRTEACAVLHPFYERTVSLFEKNGVRIVKGNPIGANATAQW IRRVGEALQLDPAVVESVAEEERLKASAVLEKFTHLRGKVIVAGYEGNELPVVRLLLEAGLDVPYASTSISRQPLGEEDH KLLTMLGTEIRYRKYLEEDMQAVVDYAPDLVIGTTSLDSFAKERGIPAIYYTNNISARPLFFATGAASVLGMIGALLSKK EVFMKMKEYFTE >Mature_412_residues MEKQDCKNLHPQSMCPAFGGLRVLTRIDGVQVCLVADQGCSYGLTFVSHFYAARKSIVTPELMNVQISGGSMIDDVRRVI AGIALDPSVRFIPVVSTCVAETAGLAEELLPKKEGNAEVLLVRLPAFQIRTHPEAKDVTVATLLKRFAAFDGPKKPKSLV VLGEIFPVDAMAIGSVLQKIGVASVITLPGTSLDDYIESGRTEACAVLHPFYERTVSLFEKNGVRIVKGNPIGANATAQW IRRVGEALQLDPAVVESVAEEERLKASAVLEKFTHLRGKVIVAGYEGNELPVVRLLLEAGLDVPYASTSISRQPLGEEDH KLLTMLGTEIRYRKYLEEDMQAVVDYAPDLVIGTTSLDSFAKERGIPAIYYTNNISARPLFFATGAASVLGMIGALLSKK EVFMKMKEYFTE
Specific function: Converts chlorophylls (Chl) into bacteriochlorophylls (BChl) by reducing ring B of the tetrapyrrole [H]
COG id: COG2710
COG function: function code C; Nitrogenase molybdenum-iron protein, alpha and beta chains
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the BchN/ChlN family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010245 - InterPro: IPR000510 - InterPro: IPR016209 [H]
Pfam domain/function: PF00148 Oxidored_nitro [H]
EC number: NA
Molecular weight: Translated: 44877; Mature: 44877
Theoretical pI: Translated: 6.27; Mature: 6.27
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEKQDCKNLHPQSMCPAFGGLRVLTRIDGVQVCLVADQGCSYGLTFVSHFYAARKSIVTP CCCCCCCCCCCHHHCCHHHHHHHHHHCCCEEEEEEECCCCCCHHHHHHHHHHHHHHCCCC ELMNVQISGGSMIDDVRRVIAGIALDPSVRFIPVVSTCVAETAGLAEELLPKKEGNAEVL CCEEEEECCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCEEE LVRLPAFQIRTHPEAKDVTVATLLKRFAAFDGPKKPKSLVVLGEIFPVDAMAIGSVLQKI EEEECCEEEECCCCCCCHHHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHHHHH GVASVITLPGTSLDDYIESGRTEACAVLHPFYERTVSLFEKNGVRIVKGNPIGANATAQW CCCEEEECCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCHHHHH IRRVGEALQLDPAVVESVAEEERLKASAVLEKFTHLRGKVIVAGYEGNELPVVRLLLEAG HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHHCC LDVPYASTSISRQPLGEEDHKLLTMLGTEIRYRKYLEEDMQAVVDYAPDLVIGTTSLDSF CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCHHHH AKERGIPAIYYTNNISARPLFFATGAASVLGMIGALLSKKEVFMKMKEYFTE HHHCCCCEEEEECCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MEKQDCKNLHPQSMCPAFGGLRVLTRIDGVQVCLVADQGCSYGLTFVSHFYAARKSIVTP CCCCCCCCCCCHHHCCHHHHHHHHHHCCCEEEEEEECCCCCCHHHHHHHHHHHHHHCCCC ELMNVQISGGSMIDDVRRVIAGIALDPSVRFIPVVSTCVAETAGLAEELLPKKEGNAEVL CCEEEEECCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCEEE LVRLPAFQIRTHPEAKDVTVATLLKRFAAFDGPKKPKSLVVLGEIFPVDAMAIGSVLQKI EEEECCEEEECCCCCCCHHHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHHHHH GVASVITLPGTSLDDYIESGRTEACAVLHPFYERTVSLFEKNGVRIVKGNPIGANATAQW CCCEEEECCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCHHHHH IRRVGEALQLDPAVVESVAEEERLKASAVLEKFTHLRGKVIVAGYEGNELPVVRLLLEAG HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHHCC LDVPYASTSISRQPLGEEDHKLLTMLGTEIRYRKYLEEDMQAVVDYAPDLVIGTTSLDSF CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCHHHH AKERGIPAIYYTNNISARPLFFATGAASVLGMIGALLSKKEVFMKMKEYFTE HHHCCCCEEEEECCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8468299 [H]