| Definition | Chlorobium phaeobacteroides DSM 266 chromosome, complete genome. |
|---|---|
| Accession | NC_008639 |
| Length | 3,133,902 |
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The map label for this gene is recG [H]
Identifier: 119357864
GI number: 119357864
Start: 2406540
End: 2408663
Strand: Reverse
Name: recG [H]
Synonym: Cpha266_2072
Alternate gene names: 119357864
Gene position: 2408663-2406540 (Counterclockwise)
Preceding gene: 119357867
Following gene: 119357863
Centisome position: 76.86
GC content: 55.79
Gene sequence:
>2124_bases ATGACAACGATGCGCTCATCATTGCGTGCGCTTCAGGGCGTAGGGCCCAGGCGGGCGGATACGCTTTCCGAGGCCGGCAT TCATGATGTCGGTGATCTCTATGACTATTTTCCTCGCCGCTATCTCGACAGGCGGGCCATGCGCAGGATCAGCGAACTGT TGAATGGAGAGACGGTTACGGTTGTCGGCAGGGTGCTGAAGACCGTGCAGGAGGGTCAGGGCGTCGCCCGGTCGCGGTTC AAGGTACTGCTTGCCGATGAAACCGGGGTTCTTGAGCTGGTCTGGTTCAGGGGGGTTCGGTATTTTTCAAAAATGCTTGC CACAGGAGATGTTCTCGCCGTTTTTGGAAAGGTCGGTTATTTCGGACGACAGGCACAGATGCAGCACCCTGATTTCGACA AGCTCGGTTCGGGGGTTCAGGCCTCCGGCAGCGGCGAAAGCTCTGACCTGGAGTTGTATCATACCGGAAGGATTATTTCG CTGTACAGCACCAGCGACGCCATGAAACAGGCAGGACTCTCGTCGCGCCAGTTGCGGATGATTCTTCTCAAGGCATTCGA TGACCATCCGCCCGGCAGGGAGGAGAATCTCAGCGAAGAGATGCTTGCGGCTCACGGGCTCATGCCCCTTGGCGAAGCCT ATCGTGAAATACATTTTCCCGCTACGCAGGAAACGCTTGCGGCAGCGCGGTATCGCCTCAAATGGACTGAACTCTTCTAC GCCCAGTTGCTGTTTGCCCTGAGGCGTCAGGAGATCCGGCAGAATAAAACCGCCGCACGATTCGACCACTCAGGAGAGAT AACCCGCAAACTCTACGAAGCGCTGCCGTTCGATCTTACCGGGGCGCAGAAAACGGTTATCCGCGAAATATATCAGGACC TCAGAAGCGGATGTCCGATGAACCGGCTGCTTCAGGGCGACGTTGGTTCCGGCAAGACTCTCGTTGCCATGTTTTCCATT GCGCTTGCAGCCGATAACGGCTTGCAGTCCGCATTTATGGCGCCGACAGAAATTCTTGCCGTCCAGCACTATCTTGCGCT CAAAAGAGCTTTTCAGCCGCTGGGGCTGAACGTCGGGCTTCTCTCCGGACGACAGCGGAAAAAAGAGCGCGATGCGGTGC TCGGCGATCTCCGGAACGGCACGATTGCCATTGCGGTAGGAACCCATGCCATGATCGAGGAGGGTGTGACCATGGCCGCT CTCGGTCTGGTGATCATCGACGAACAGCACCGGTTCGGCGTGTTGCAGCGCAAGGCGCTCCAGGAAAAAGCGCTGAACCC TCATGTTCTCCTGATGACCGCCACGCCGATTCCCCGAACGCTCTGCATGGGCGTGTTCGGCGATCTCGATGTCTCGGTCA TCAACGAAATGCCGCCGGGCAGGCAGCCTGTCGTAACAAAACTTCTTGCCGGAAACGAGACCGGCGAGGCCTATACCTCA ATTATCCGTGAAGTACAAAAAGGACGGCAGGCCTATATTGTCTATCCGATGGTTGAAGAGTCTGAAAAAATCGATCTTAA GGCCGCCGTTGACCGTTTCGATTTTCTGACGGCAAACATATTTTCCGATCTCCGGCTCGGGCTGATTCACGGAAGAATGA CGACCGAAAGCAAGGAGAGTGTAATGGATGAGTTCAGAAACGGACGAATCGATGTGCTTGTCGGAACGACCGTGATTGAG GTTGGCGTGGATGTTCCCAACGCCACCATCATGATGATCGAACATGCCGAGCGGTTCGGACTGGCTCAGTTGCACCAGCT CAGAGGGAGGGTAGGCCGGGGAAGCCATCCCTCCACCTGTTTTCTCTGTTATGAAAAAACAGCCCCGGATGCGTTGCGTC GGCTGCATGCCATGGAGTCGGTTGCCGACGGATTCAGGATTTCGAAAATCGACGCCGAAATCAGGGGAACCGGCAATATA CTTGGCAAAGAGCAGTCCGGCGCGGCAAGCGGTCTGAAGATTGCCGATCTGCAGCATGACGAAGCAATTCTGAACATTGC GCGAACGGAGGCATTCGCGCTTGTCGCAAAAGATTCGCAGCTCAGGATGCCGGAACACGCTATGATCAGAACCTGTTATT TGCGTCATTACCATGAGCGCTATGCCCTTGCCGATATCGGATAG
Upstream 100 bases:
>100_bases ATGACTCTTTTTCTTTCTCGTACAATGAAGAGGTGATATGAACGGCAATAAAATAATAAAGGTGCTAATATACAAGAATT AATGACGAGTTACAACTGAT
Downstream 100 bases:
>100_bases CCTTTCCATTGAAACGTTCTGATTGAACAGACAGACGGATATGAAAAAAGAGATTGAAGAAGAGGTCGGGGTCGCTCTTG AGGGAGTCGTTACCGAAGCA
Product: ATP-dependent DNA helicase RecG
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 707; Mature: 706
Protein sequence:
>707_residues MTTMRSSLRALQGVGPRRADTLSEAGIHDVGDLYDYFPRRYLDRRAMRRISELLNGETVTVVGRVLKTVQEGQGVARSRF KVLLADETGVLELVWFRGVRYFSKMLATGDVLAVFGKVGYFGRQAQMQHPDFDKLGSGVQASGSGESSDLELYHTGRIIS LYSTSDAMKQAGLSSRQLRMILLKAFDDHPPGREENLSEEMLAAHGLMPLGEAYREIHFPATQETLAAARYRLKWTELFY AQLLFALRRQEIRQNKTAARFDHSGEITRKLYEALPFDLTGAQKTVIREIYQDLRSGCPMNRLLQGDVGSGKTLVAMFSI ALAADNGLQSAFMAPTEILAVQHYLALKRAFQPLGLNVGLLSGRQRKKERDAVLGDLRNGTIAIAVGTHAMIEEGVTMAA LGLVIIDEQHRFGVLQRKALQEKALNPHVLLMTATPIPRTLCMGVFGDLDVSVINEMPPGRQPVVTKLLAGNETGEAYTS IIREVQKGRQAYIVYPMVEESEKIDLKAAVDRFDFLTANIFSDLRLGLIHGRMTTESKESVMDEFRNGRIDVLVGTTVIE VGVDVPNATIMMIEHAERFGLAQLHQLRGRVGRGSHPSTCFLCYEKTAPDALRRLHAMESVADGFRISKIDAEIRGTGNI LGKEQSGAASGLKIADLQHDEAILNIARTEAFALVAKDSQLRMPEHAMIRTCYLRHYHERYALADIG
Sequences:
>Translated_707_residues MTTMRSSLRALQGVGPRRADTLSEAGIHDVGDLYDYFPRRYLDRRAMRRISELLNGETVTVVGRVLKTVQEGQGVARSRF KVLLADETGVLELVWFRGVRYFSKMLATGDVLAVFGKVGYFGRQAQMQHPDFDKLGSGVQASGSGESSDLELYHTGRIIS LYSTSDAMKQAGLSSRQLRMILLKAFDDHPPGREENLSEEMLAAHGLMPLGEAYREIHFPATQETLAAARYRLKWTELFY AQLLFALRRQEIRQNKTAARFDHSGEITRKLYEALPFDLTGAQKTVIREIYQDLRSGCPMNRLLQGDVGSGKTLVAMFSI ALAADNGLQSAFMAPTEILAVQHYLALKRAFQPLGLNVGLLSGRQRKKERDAVLGDLRNGTIAIAVGTHAMIEEGVTMAA LGLVIIDEQHRFGVLQRKALQEKALNPHVLLMTATPIPRTLCMGVFGDLDVSVINEMPPGRQPVVTKLLAGNETGEAYTS IIREVQKGRQAYIVYPMVEESEKIDLKAAVDRFDFLTANIFSDLRLGLIHGRMTTESKESVMDEFRNGRIDVLVGTTVIE VGVDVPNATIMMIEHAERFGLAQLHQLRGRVGRGSHPSTCFLCYEKTAPDALRRLHAMESVADGFRISKIDAEIRGTGNI LGKEQSGAASGLKIADLQHDEAILNIARTEAFALVAKDSQLRMPEHAMIRTCYLRHYHERYALADIG >Mature_706_residues TTMRSSLRALQGVGPRRADTLSEAGIHDVGDLYDYFPRRYLDRRAMRRISELLNGETVTVVGRVLKTVQEGQGVARSRFK VLLADETGVLELVWFRGVRYFSKMLATGDVLAVFGKVGYFGRQAQMQHPDFDKLGSGVQASGSGESSDLELYHTGRIISL YSTSDAMKQAGLSSRQLRMILLKAFDDHPPGREENLSEEMLAAHGLMPLGEAYREIHFPATQETLAAARYRLKWTELFYA QLLFALRRQEIRQNKTAARFDHSGEITRKLYEALPFDLTGAQKTVIREIYQDLRSGCPMNRLLQGDVGSGKTLVAMFSIA LAADNGLQSAFMAPTEILAVQHYLALKRAFQPLGLNVGLLSGRQRKKERDAVLGDLRNGTIAIAVGTHAMIEEGVTMAAL GLVIIDEQHRFGVLQRKALQEKALNPHVLLMTATPIPRTLCMGVFGDLDVSVINEMPPGRQPVVTKLLAGNETGEAYTSI IREVQKGRQAYIVYPMVEESEKIDLKAAVDRFDFLTANIFSDLRLGLIHGRMTTESKESVMDEFRNGRIDVLVGTTVIEV GVDVPNATIMMIEHAERFGLAQLHQLRGRVGRGSHPSTCFLCYEKTAPDALRRLHAMESVADGFRISKIDAEIRGTGNIL GKEQSGAASGLKIADLQHDEAILNIARTEAFALVAKDSQLRMPEHAMIRTCYLRHYHERYALADIG
Specific function: Critical role in recombination and DNA repair. Help process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3' to 5' polarity. RecG unwind branched dup
COG id: COG1200
COG function: function code LK; RecG-like helicase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 helicase C-terminal domain [H]
Homologues:
Organism=Escherichia coli, GI2367254, Length=714, Percent_Identity=41.0364145658263, Blast_Score=412, Evalue=1e-116, Organism=Escherichia coli, GI1787357, Length=402, Percent_Identity=38.3084577114428, Blast_Score=265, Evalue=9e-72,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014001 - InterPro: IPR011545 - InterPro: IPR004609 - InterPro: IPR001650 - InterPro: IPR014021 - InterPro: IPR016027 - InterPro: IPR004365 [H]
Pfam domain/function: PF00270 DEAD; PF00271 Helicase_C; PF01336 tRNA_anti [H]
EC number: =3.6.4.12 [H]
Molecular weight: Translated: 78488; Mature: 78356
Theoretical pI: Translated: 8.43; Mature: 8.43
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTMRSSLRALQGVGPRRADTLSEAGIHDVGDLYDYFPRRYLDRRAMRRISELLNGETVT CCCHHHHHHHHHCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH VVGRVLKTVQEGQGVARSRFKVLLADETGVLELVWFRGVRYFSKMLATGDVLAVFGKVGY HHHHHHHHHHHCCCHHHHHEEEEEECCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCC FGRQAQMQHPDFDKLGSGVQASGSGESSDLELYHTGRIISLYSTSDAMKQAGLSSRQLRM CCCCCCCCCCCHHHHCCCCCCCCCCCCCCEEEEECCEEEEEECCHHHHHHCCCCHHHHHH ILLKAFDDHPPGREENLSEEMLAAHGLMPLGEAYREIHFPATQETLAAARYRLKWTELFY HHHHHHCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH AQLLFALRRQEIRQNKTAARFDHSGEITRKLYEALPFDLTGAQKTVIREIYQDLRSGCPM HHHHHHHHHHHHHHCCCHHHCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCH NRLLQGDVGSGKTLVAMFSIALAADNGLQSAFMAPTEILAVQHYLALKRAFQPLGLNVGL HHHHCCCCCCCCHHHHHHHHHHHCCCCCHHHHCCHHHHHHHHHHHHHHHHCCCCCCEEEE LSGRQRKKERDAVLGDLRNGTIAIAVGTHAMIEEGVTMAALGLVIIDEQHRFGVLQRKAL CCCHHHHHHHHHHHHHCCCCEEEEEECCHHHHHCCCHHHHEEEEEECCCHHHHHHHHHHH QEKALNPHVLLMTATPIPRTLCMGVFGDLDVSVINEMPPGRQPVVTKLLAGNETGEAYTS HHHCCCCEEEEEECCCCHHHHHHHHHCCCCHHHHHCCCCCCCHHHHHHHCCCCCCHHHHH IIREVQKGRQAYIVYPMVEESEKIDLKAAVDRFDFLTANIFSDLRLGLIHGRMTTESKES HHHHHHCCCEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHH VMDEFRNGRIDVLVGTTVIEVGVDVPNATIMMIEHAERFGLAQLHQLRGRVGRGSHPSTC HHHHHHCCCEEEEECCEEEEECCCCCCCEEEEEECHHHCCHHHHHHHHHCCCCCCCCCEE FLCYEKTAPDALRRLHAMESVADGFRISKIDAEIRGTGNILGKEQSGAASGLKIADLQHD EEEEECCCHHHHHHHHHHHHHHCCCEEEEECCEECCCCCCCCCCCCCCCCCCEEECCCCH EAILNIARTEAFALVAKDSQLRMPEHAMIRTCYLRHYHERYALADIG HHHHHHHHHHHEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure TTMRSSLRALQGVGPRRADTLSEAGIHDVGDLYDYFPRRYLDRRAMRRISELLNGETVT CCHHHHHHHHHCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH VVGRVLKTVQEGQGVARSRFKVLLADETGVLELVWFRGVRYFSKMLATGDVLAVFGKVGY HHHHHHHHHHHCCCHHHHHEEEEEECCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCC FGRQAQMQHPDFDKLGSGVQASGSGESSDLELYHTGRIISLYSTSDAMKQAGLSSRQLRM CCCCCCCCCCCHHHHCCCCCCCCCCCCCCEEEEECCEEEEEECCHHHHHHCCCCHHHHHH ILLKAFDDHPPGREENLSEEMLAAHGLMPLGEAYREIHFPATQETLAAARYRLKWTELFY HHHHHHCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH AQLLFALRRQEIRQNKTAARFDHSGEITRKLYEALPFDLTGAQKTVIREIYQDLRSGCPM HHHHHHHHHHHHHHCCCHHHCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCH NRLLQGDVGSGKTLVAMFSIALAADNGLQSAFMAPTEILAVQHYLALKRAFQPLGLNVGL HHHHCCCCCCCCHHHHHHHHHHHCCCCCHHHHCCHHHHHHHHHHHHHHHHCCCCCCEEEE LSGRQRKKERDAVLGDLRNGTIAIAVGTHAMIEEGVTMAALGLVIIDEQHRFGVLQRKAL CCCHHHHHHHHHHHHHCCCCEEEEEECCHHHHHCCCHHHHEEEEEECCCHHHHHHHHHHH QEKALNPHVLLMTATPIPRTLCMGVFGDLDVSVINEMPPGRQPVVTKLLAGNETGEAYTS HHHCCCCEEEEEECCCCHHHHHHHHHCCCCHHHHHCCCCCCCHHHHHHHCCCCCCHHHHH IIREVQKGRQAYIVYPMVEESEKIDLKAAVDRFDFLTANIFSDLRLGLIHGRMTTESKES HHHHHHCCCEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHH VMDEFRNGRIDVLVGTTVIEVGVDVPNATIMMIEHAERFGLAQLHQLRGRVGRGSHPSTC HHHHHHCCCEEEEECCEEEEECCCCCCCEEEEEECHHHCCHHHHHHHHHCCCCCCCCCEE FLCYEKTAPDALRRLHAMESVADGFRISKIDAEIRGTGNILGKEQSGAASGLKIADLQHD EEEEECCCHHHHHHHHHHHHHHCCCEEEEECCEECCCCCCCCCCCCCCCCCCEEECCCCH EAILNIARTEAFALVAKDSQLRMPEHAMIRTCYLRHYHERYALADIG HHHHHHHHHHHEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8590279; 8905231 [H]