Click here to switch to the map view.

The map label for this gene is rsgA [H]

Identifier: 119357863

GI number: 119357863

Start: 2405531

End: 2406499

Strand: Reverse

Name: rsgA [H]

Synonym: Cpha266_2071

Alternate gene names: 119357863

Gene position: 2406499-2405531 (Counterclockwise)

Preceding gene: 119357864

Following gene: 119357862

Centisome position: 76.79

GC content: 55.42

Gene sequence:

>969_bases
ATGAAAAAAGAGATTGAAGAAGAGGTCGGGGTCGCTCTTGAGGGAGTCGTTACCGAAGCAAGAGGGGCTTCCTATCTGGT
CAGCGCAAGTGACGGGAAAAACTACCGATGCCGCACGATTGCCGGAACACAGACGGAGAATATCGATGCTTCGCTTGTCT
CGGTGGGCGACCGGGTGCGGTTCAAGGAGTCCGGAGAGAGCGGTGAGGCTCATCCTCAGGGAGTGATCACGCACGTAGGG
AAGCGGTTCAGCAGTCTTGAGAGAAAACGGGATGTGCGCAGAAACCGCAGCAAGGAGAAAAAACAGGTTATCGCATCAAA
CATCGAGCTGCTCGTGATCGTCGTTGCCGCGTTCGAGCCACCTCTCAGCACCCGCCTCATCGACAGGTACCTCGTGTTTG
CCGAATCGGAAAACCTGCCGGTTGTGATCGTGGTCAACAAGATGGATCTTGACGATGATGACGAAATTCCCGCCCTCATG
GCGCCCTATACCCTGCTCGGCTATACGGTCATACTGGTGAGCGTGCGCCAAAAGCGAGGGCTCGAAGAGCTCGATCAGCT
TCTTTCCGGCAAGGTTTCAGCCATGAGCGGCCACTCCGGCGTCGGCAAGTCGAGCATCATCAATGTGCTGACCGGGCAGA
AACGGATGAAAACCGCCAGAACAAGCTATAAAAATGGCAAGGGGGTGCATACAACGAGCAACGCCGTGATGCTCCCGCTG
ATTTCGGGAGGTTATCTTATCGATACGCCGGGCATCCGGGAGTTCAGCCTGTCGGGAATCAGCCGGGAACAGTTGCGATT
TTACTTCAGGGAGTTTCTCCAGTTCATGCCGGAGTGCAGCTACTCCTCCTGTTCCCATACGGTAGAGCCCGGTTGCAGAG
TGAGAGGGGCTGTCGAAGAGGGGCTTGTTGACCCGGATCGGTACGAGAGTTATCTTGTGCTCTACGACGGACTTGAAAGT
GAGCAGTAA

Upstream 100 bases:

>100_bases
ATCAGAACCTGTTATTTGCGTCATTACCATGAGCGCTATGCCCTTGCCGATATCGGATAGCCTTTCCATTGAAACGTTCT
GATTGAACAGACAGACGGAT

Downstream 100 bases:

>100_bases
GTGATGTTATTTTCGGATTATCACCACGGTTTAATTTTTTCGCATTCAAAACTCAACGCTATGATCGTTACCATAAACCC
CGCGACCGAAGAGGTTCTTG

Product: ribosome small subunit-dependent GTPase A

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 322; Mature: 322

Protein sequence:

>322_residues
MKKEIEEEVGVALEGVVTEARGASYLVSASDGKNYRCRTIAGTQTENIDASLVSVGDRVRFKESGESGEAHPQGVITHVG
KRFSSLERKRDVRRNRSKEKKQVIASNIELLVIVVAAFEPPLSTRLIDRYLVFAESENLPVVIVVNKMDLDDDDEIPALM
APYTLLGYTVILVSVRQKRGLEELDQLLSGKVSAMSGHSGVGKSSIINVLTGQKRMKTARTSYKNGKGVHTTSNAVMLPL
ISGGYLIDTPGIREFSLSGISREQLRFYFREFLQFMPECSYSSCSHTVEPGCRVRGAVEEGLVDPDRYESYLVLYDGLES
EQ

Sequences:

>Translated_322_residues
MKKEIEEEVGVALEGVVTEARGASYLVSASDGKNYRCRTIAGTQTENIDASLVSVGDRVRFKESGESGEAHPQGVITHVG
KRFSSLERKRDVRRNRSKEKKQVIASNIELLVIVVAAFEPPLSTRLIDRYLVFAESENLPVVIVVNKMDLDDDDEIPALM
APYTLLGYTVILVSVRQKRGLEELDQLLSGKVSAMSGHSGVGKSSIINVLTGQKRMKTARTSYKNGKGVHTTSNAVMLPL
ISGGYLIDTPGIREFSLSGISREQLRFYFREFLQFMPECSYSSCSHTVEPGCRVRGAVEEGLVDPDRYESYLVLYDGLES
EQ
>Mature_322_residues
MKKEIEEEVGVALEGVVTEARGASYLVSASDGKNYRCRTIAGTQTENIDASLVSVGDRVRFKESGESGEAHPQGVITHVG
KRFSSLERKRDVRRNRSKEKKQVIASNIELLVIVVAAFEPPLSTRLIDRYLVFAESENLPVVIVVNKMDLDDDDEIPALM
APYTLLGYTVILVSVRQKRGLEELDQLLSGKVSAMSGHSGVGKSSIINVLTGQKRMKTARTSYKNGKGVHTTSNAVMLPL
ISGGYLIDTPGIREFSLSGISREQLRFYFREFLQFMPECSYSSCSHTVEPGCRVRGAVEEGLVDPDRYESYLVLYDGLES
EQ

Specific function: May play a role in 30S ribosomal subunit biogenesis. Unusual circulary permuted GTPase that catalyzes rapid hydrolysis of GTP with a slow catalytic turnover [H]

COG id: COG1162

COG function: function code R; Predicted GTPases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 engC GTPase domain [H]

Homologues:

Organism=Escherichia coli, GI87082381, Length=306, Percent_Identity=38.2352941176471, Blast_Score=179, Evalue=3e-46,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010914
- InterPro:   IPR016027
- InterPro:   IPR004881 [H]

Pfam domain/function: PF03193 DUF258 [H]

EC number: NA

Molecular weight: Translated: 35606; Mature: 35606

Theoretical pI: Translated: 6.38; Mature: 6.38

Prosite motif: PS50936 ENGC_GTPASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKEIEEEVGVALEGVVTEARGASYLVSASDGKNYRCRTIAGTQTENIDASLVSVGDRVR
CCCHHHHHHCHHHHHHHHHCCCCEEEEECCCCCCEEEEEECCCCCCCCCHHHHHHCCCEE
FKESGESGEAHPQGVITHVGKRFSSLERKRDVRRNRSKEKKQVIASNIELLVIVVAAFEP
ECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCC
PLSTRLIDRYLVFAESENLPVVIVVNKMDLDDDDEIPALMAPYTLLGYTVILVSVRQKRG
CHHHHHHHHHHEEECCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCC
LEELDQLLSGKVSAMSGHSGVGKSSIINVLTGQKRMKTARTSYKNGKGVHTTSNAVMLPL
HHHHHHHHCCCCEECCCCCCCCHHHHHHHHCCHHHHHHHHHHCCCCCCEEECCCEEEEEE
ISGGYLIDTPGIREFSLSGISREQLRFYFREFLQFMPECSYSSCSHTVEPGCRVRGAVEE
ECCCEEEECCCCCEEECCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEECHHHH
GLVDPDRYESYLVLYDGLESEQ
CCCCCHHCCCEEEEECCCCCCC
>Mature Secondary Structure
MKKEIEEEVGVALEGVVTEARGASYLVSASDGKNYRCRTIAGTQTENIDASLVSVGDRVR
CCCHHHHHHCHHHHHHHHHCCCCEEEEECCCCCCEEEEEECCCCCCCCCHHHHHHCCCEE
FKESGESGEAHPQGVITHVGKRFSSLERKRDVRRNRSKEKKQVIASNIELLVIVVAAFEP
ECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCC
PLSTRLIDRYLVFAESENLPVVIVVNKMDLDDDDEIPALMAPYTLLGYTVILVSVRQKRG
CHHHHHHHHHHEEECCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCC
LEELDQLLSGKVSAMSGHSGVGKSSIINVLTGQKRMKTARTSYKNGKGVHTTSNAVMLPL
HHHHHHHHCCCCEECCCCCCCCHHHHHHHHCCHHHHHHHHHHCCCCCCEEECCCEEEEEE
ISGGYLIDTPGIREFSLSGISREQLRFYFREFLQFMPECSYSSCSHTVEPGCRVRGAVEE
ECCCEEEECCCCCEEECCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEECHHHH
GLVDPDRYESYLVLYDGLESEQ
CCCCCHHCCCEEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: GTP [C]

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA