| Definition | Chlorobium phaeobacteroides DSM 266 chromosome, complete genome. |
|---|---|
| Accession | NC_008639 |
| Length | 3,133,902 |
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The map label for this gene is 119357854
Identifier: 119357854
GI number: 119357854
Start: 2393840
End: 2394841
Strand: Reverse
Name: 119357854
Synonym: Cpha266_2062
Alternate gene names: NA
Gene position: 2394841-2393840 (Counterclockwise)
Preceding gene: 119357855
Following gene: 119357853
Centisome position: 76.42
GC content: 54.99
Gene sequence:
>1002_bases ATGTATACCTCTCTTTTTCCTCTTCGCATTGCTCGGTTTCGGTGTACGATTGAGCCTTTGGAGCTGGTGCAGTTGCCGGA TTACAAGGGGTCGGCGTTGCGGGGCGGGTTTGGGCATGCGTTCAGGCGGGCTACCTGTCTGAGCCGTGACCGGGAGTGTG AGTCTTGTATGCTGAAGTCGGCTTGTGCCTATTATACGGTGTTCGAGTCGAGGGTTTCTCGCCAGACGGCTGACCGGCTG AGGATCGGGGCGGATGCTCCTCATCCTTTTCTGCTGGAACCTCCGATGACCGGGCAGCACTGTTTTGAGCCAGGCCAGAA GATCTCTTACGGGTTGACGCTGTTTGGGTCTGCTATTGAAAAGCTGCCGTTTTTCATCTATGCGTTTATGATTCTGGGGG AAAATCTGGGGCTTGGCAAGGGGCGGGGGCGGTTCAGGCTGCTTGCGGTTGAGGATGAAGGGGGCAGGAACCTGTATCAT GATGGTCATCTGTCTGGCGGGTTTGTTATCCTTTCGGCAAGGGATATTCTTGAATCGACCTCAACAGATGATCGTCCGCT TGCGTTGAGGTTTGAAACGCCTCTTCGCATGAAAACCGCATGGCAGCGGAAAGAGCAGGAGCTCCTTACCGGTATCGGGC ATGAGGATGATTTCAGGTTGCTGCTCAAGTCGCTTTACCACAGGGCTTTTGTGCTGACGCAGCTTTATGGCGACCTTCCT GAACCGGCGTCGTATAACAGCCGGAACCTGCCGCTGGTAAACGGCGATGTTCATCTTGGAAGCGCTGAAACCCGCTGGCT CGACTGGACCCGGTATTCTCAGCGCCACCAGCAGCATATGCAGCTTGGGGGAATTCTGGGTTCGGTTACGTTTACCGGCA AAACGGGTCAGTATCTGCCGCTTTTCAGGCTTGGGGAGTATCTTCATATCGGCAAGGGAACAACATTCGGGCTTGGGAAG TACCGGATGGTTGAACCTGTACCGGAGCAGACGGGTGAGTGA
Upstream 100 bases:
>100_bases GCTGTGTTTCTGTGTTGTGGTGATGGGTGGTTGTTTGGGGCTTGTAGGGTTTTGAGTATGGCTTTGTTTTGGTTTAATGC GGTATAATATTTGTTGTTGT
Downstream 100 bases:
>100_bases GGCTTCTCTTTTTCTTCGCACGCTCTATATCCAGGAGCAGGGTTCGATGCTCAGGGTTGAGAACGGGTGTTTTCGCGTGA CGTGCGGGCACGATGACGAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 333; Mature: 333
Protein sequence:
>333_residues MYTSLFPLRIARFRCTIEPLELVQLPDYKGSALRGGFGHAFRRATCLSRDRECESCMLKSACAYYTVFESRVSRQTADRL RIGADAPHPFLLEPPMTGQHCFEPGQKISYGLTLFGSAIEKLPFFIYAFMILGENLGLGKGRGRFRLLAVEDEGGRNLYH DGHLSGGFVILSARDILESTSTDDRPLALRFETPLRMKTAWQRKEQELLTGIGHEDDFRLLLKSLYHRAFVLTQLYGDLP EPASYNSRNLPLVNGDVHLGSAETRWLDWTRYSQRHQQHMQLGGILGSVTFTGKTGQYLPLFRLGEYLHIGKGTTFGLGK YRMVEPVPEQTGE
Sequences:
>Translated_333_residues MYTSLFPLRIARFRCTIEPLELVQLPDYKGSALRGGFGHAFRRATCLSRDRECESCMLKSACAYYTVFESRVSRQTADRL RIGADAPHPFLLEPPMTGQHCFEPGQKISYGLTLFGSAIEKLPFFIYAFMILGENLGLGKGRGRFRLLAVEDEGGRNLYH DGHLSGGFVILSARDILESTSTDDRPLALRFETPLRMKTAWQRKEQELLTGIGHEDDFRLLLKSLYHRAFVLTQLYGDLP EPASYNSRNLPLVNGDVHLGSAETRWLDWTRYSQRHQQHMQLGGILGSVTFTGKTGQYLPLFRLGEYLHIGKGTTFGLGK YRMVEPVPEQTGE >Mature_333_residues MYTSLFPLRIARFRCTIEPLELVQLPDYKGSALRGGFGHAFRRATCLSRDRECESCMLKSACAYYTVFESRVSRQTADRL RIGADAPHPFLLEPPMTGQHCFEPGQKISYGLTLFGSAIEKLPFFIYAFMILGENLGLGKGRGRFRLLAVEDEGGRNLYH DGHLSGGFVILSARDILESTSTDDRPLALRFETPLRMKTAWQRKEQELLTGIGHEDDFRLLLKSLYHRAFVLTQLYGDLP EPASYNSRNLPLVNGDVHLGSAETRWLDWTRYSQRHQQHMQLGGILGSVTFTGKTGQYLPLFRLGEYLHIGKGTTFGLGK YRMVEPVPEQTGE
Specific function: Unknown
COG id: COG5551
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37690; Mature: 37690
Theoretical pI: Translated: 8.55; Mature: 8.55
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYTSLFPLRIARFRCTIEPLELVQLPDYKGSALRGGFGHAFRRATCLSRDRECESCMLKS CCCCCHHHHHHHHEEECCHHHEEECCCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHH ACAYYTVFESRVSRQTADRLRIGADAPHPFLLEPPMTGQHCFEPGQKISYGLTLFGSAIE HHHHHHHHHHHHHHHHHHHHEECCCCCCCEEECCCCCCHHHHCCCCHHHHHHHHHHHHHH KLPFFIYAFMILGENLGLGKGRGRFRLLAVEDEGGRNLYHDGHLSGGFVILSARDILEST HHHHHHHHHHHHCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCEEEEEEHHHHHCC STDDRPLALRFETPLRMKTAWQRKEQELLTGIGHEDDFRLLLKSLYHRAFVLTQLYGDLP CCCCCCEEEEECCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCC EPASYNSRNLPLVNGDVHLGSAETRWLDWTRYSQRHQQHMQLGGILGSVTFTGKTGQYLP CCCCCCCCCCCEEECCEEECCCCCCEEHHHHHHHHHHHHHHHHCEEEEEEEECCCCCCCH LFRLGEYLHIGKGTTFGLGKYRMVEPVPEQTGE HHHCCCEEECCCCCEECCCCEEEECCCCCCCCC >Mature Secondary Structure MYTSLFPLRIARFRCTIEPLELVQLPDYKGSALRGGFGHAFRRATCLSRDRECESCMLKS CCCCCHHHHHHHHEEECCHHHEEECCCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHH ACAYYTVFESRVSRQTADRLRIGADAPHPFLLEPPMTGQHCFEPGQKISYGLTLFGSAIE HHHHHHHHHHHHHHHHHHHHEECCCCCCCEEECCCCCCHHHHCCCCHHHHHHHHHHHHHH KLPFFIYAFMILGENLGLGKGRGRFRLLAVEDEGGRNLYHDGHLSGGFVILSARDILEST HHHHHHHHHHHHCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCEEEEEEHHHHHCC STDDRPLALRFETPLRMKTAWQRKEQELLTGIGHEDDFRLLLKSLYHRAFVLTQLYGDLP CCCCCCEEEEECCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCC EPASYNSRNLPLVNGDVHLGSAETRWLDWTRYSQRHQQHMQLGGILGSVTFTGKTGQYLP CCCCCCCCCCCEEECCEEECCCCCCEEHHHHHHHHHHHHHHHHCEEEEEEEECCCCCCCH LFRLGEYLHIGKGTTFGLGKYRMVEPVPEQTGE HHHCCCEEECCCCCEECCCCEEEECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA