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The map label for this gene is 119357853

Identifier: 119357853

GI number: 119357853

Start: 2392804

End: 2393847

Strand: Reverse

Name: 119357853

Synonym: Cpha266_2061

Alternate gene names: NA

Gene position: 2393847-2392804 (Counterclockwise)

Preceding gene: 119357854

Following gene: 119357852

Centisome position: 76.39

GC content: 55.27

Gene sequence:

>1044_bases
GTGAGTGAGGCTTCTCTTTTTCTTCGCACGCTCTATATCCAGGAGCAGGGTTCGATGCTCAGGGTTGAGAACGGGTGTTT
TCGCGTGACGTGCGGGCACGATGACGATGTTGCCGAACTGCTTGAGGTGCAGTCAATCAAGGTTGGGCAGATTGTGCTGT
TCGGCGCCTGTATGATTACTCCGGCTGCCATCCGGCATTGCCTCATGAACCGCATTCCCGTTGTGCTGCTTTCGCAGCAT
GGCGAGTATTTCACCCGTCTTGAATCGACCGATGATGTCAATATCGATCTTGAGCGGTTACAGTTTCAGCGATCTGCTGA
AGAGTCGTTTCCGCTGGAGTGTTCGCGAACTATCGTGCGGGCGAAGCTGCATAATTCCGGGGTTTTGCTCAGGCGTCATG
CTGAGTCATCGGGTTCAGAGGCGCTCCGGCACGCTGCTACGCAACTGCGGCAACTGGAGGAGCATGTTGATCGTGCCGAT
TCGATCGATGCGGTGCGGGGCTACGAAGGGAGCGGTGCGGCGACATATTTCGGCGTGTTCGAGGATTTTTTTGATACCGG
GGGGTTCATCTTCAGAGAGCGGGTCAAGCGTCCGCCGACCGATCCGGTCAATGCGATGCTGAGTTTCGGGTACAGTCTGC
TTTTCAACAACATTTTTTCGATGGCAAGATTGCATCGGCTGCACCCTTACGTCGGGTTTCTGCATGCCGACAAGCCCGCT
CATCCTGCACTTGTGAGCGATCTGATCGAGGAGTTCCGCACGCTTGTTGACGGTCTCGTGATCGCGCTTATCAACAAGCG
GCTCATCAGCCCGGAGGAGTTTACCGTTGCGCGGCATGATGACGGAAAACCCAAAGGGTGCTACCTCTCGGATGGAGCGC
GCAAAACTTTTCTTCGCGAGTTCGAAAACCTCATGCACCGGACAACGACCCACCCGGCAACGGGCTATGAGGTAACCTGC
AGGAGGTGTCTTGACTTGCAGGTGGGGGAGTTTGCCCTTTATCTCAAAGGGGAGAAACCGTATACGCCATATCTGAGGAG
GTGA

Upstream 100 bases:

>100_bases
CTGCCGCTTTTCAGGCTTGGGGAGTATCTTCATATCGGCAAGGGAACAACATTCGGGCTTGGGAAGTACCGGATGGTTGA
ACCTGTACCGGAGCAGACGG

Downstream 100 bases:

>100_bases
ACCATGTTTATGCTTGTTTCCTACGACATCTGCGATATAAAACGACTTCCGCGGGTAGCCAAACTGATGGAGGGCTATGG
CGTTCGGGTGCAGTACAGCG

Product: CRISPR-associated Cas1 family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 347; Mature: 346

Protein sequence:

>347_residues
MSEASLFLRTLYIQEQGSMLRVENGCFRVTCGHDDDVAELLEVQSIKVGQIVLFGACMITPAAIRHCLMNRIPVVLLSQH
GEYFTRLESTDDVNIDLERLQFQRSAEESFPLECSRTIVRAKLHNSGVLLRRHAESSGSEALRHAATQLRQLEEHVDRAD
SIDAVRGYEGSGAATYFGVFEDFFDTGGFIFRERVKRPPTDPVNAMLSFGYSLLFNNIFSMARLHRLHPYVGFLHADKPA
HPALVSDLIEEFRTLVDGLVIALINKRLISPEEFTVARHDDGKPKGCYLSDGARKTFLREFENLMHRTTTHPATGYEVTC
RRCLDLQVGEFALYLKGEKPYTPYLRR

Sequences:

>Translated_347_residues
MSEASLFLRTLYIQEQGSMLRVENGCFRVTCGHDDDVAELLEVQSIKVGQIVLFGACMITPAAIRHCLMNRIPVVLLSQH
GEYFTRLESTDDVNIDLERLQFQRSAEESFPLECSRTIVRAKLHNSGVLLRRHAESSGSEALRHAATQLRQLEEHVDRAD
SIDAVRGYEGSGAATYFGVFEDFFDTGGFIFRERVKRPPTDPVNAMLSFGYSLLFNNIFSMARLHRLHPYVGFLHADKPA
HPALVSDLIEEFRTLVDGLVIALINKRLISPEEFTVARHDDGKPKGCYLSDGARKTFLREFENLMHRTTTHPATGYEVTC
RRCLDLQVGEFALYLKGEKPYTPYLRR
>Mature_346_residues
SEASLFLRTLYIQEQGSMLRVENGCFRVTCGHDDDVAELLEVQSIKVGQIVLFGACMITPAAIRHCLMNRIPVVLLSQHG
EYFTRLESTDDVNIDLERLQFQRSAEESFPLECSRTIVRAKLHNSGVLLRRHAESSGSEALRHAATQLRQLEEHVDRADS
IDAVRGYEGSGAATYFGVFEDFFDTGGFIFRERVKRPPTDPVNAMLSFGYSLLFNNIFSMARLHRLHPYVGFLHADKPAH
PALVSDLIEEFRTLVDGLVIALINKRLISPEEFTVARHDDGKPKGCYLSDGARKTFLREFENLMHRTTTHPATGYEVTCR
RCLDLQVGEFALYLKGEKPYTPYLRR

Specific function: Unknown

COG id: COG1518

COG function: function code L; Uncharacterized protein predicted to be involved in DNA repair

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002729
- InterPro:   IPR019858 [H]

Pfam domain/function: PF01867 DUF48 [H]

EC number: NA

Molecular weight: Translated: 39374; Mature: 39243

Theoretical pI: Translated: 6.75; Mature: 6.75

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSEASLFLRTLYIQEQGSMLRVENGCFRVTCGHDDDVAELLEVQSIKVGQIVLFGACMIT
CCCHHHHHHHHHHHCCCCEEEEECCEEEEECCCCHHHHHHHHHHCCCCCHHHHHHHHHHH
PAAIRHCLMNRIPVVLLSQHGEYFTRLESTDDVNIDLERLQFQRSAEESFPLECSRTIVR
HHHHHHHHHHCCCEEEEECCCHHHHHCCCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHH
AKLHNSGVLLRRHAESSGSEALRHAATQLRQLEEHVDRADSIDAVRGYEGSGAATYFGVF
HHHCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCCCHHHHHHH
EDFFDTGGFIFRERVKRPPTDPVNAMLSFGYSLLFNNIFSMARLHRLHPYVGFLHADKPA
HHHHHCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHEEEECCCCC
HPALVSDLIEEFRTLVDGLVIALINKRLISPEEFTVARHDDGKPKGCYLSDGARKTFLRE
CHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCEEECCCHHHHHHHH
FENLMHRTTTHPATGYEVTCRRCLDLQVGEFALYLKGEKPYTPYLRR
HHHHHHHCCCCCCCCHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCC
>Mature Secondary Structure 
SEASLFLRTLYIQEQGSMLRVENGCFRVTCGHDDDVAELLEVQSIKVGQIVLFGACMIT
CCHHHHHHHHHHHCCCCEEEEECCEEEEECCCCHHHHHHHHHHCCCCCHHHHHHHHHHH
PAAIRHCLMNRIPVVLLSQHGEYFTRLESTDDVNIDLERLQFQRSAEESFPLECSRTIVR
HHHHHHHHHHCCCEEEEECCCHHHHHCCCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHH
AKLHNSGVLLRRHAESSGSEALRHAATQLRQLEEHVDRADSIDAVRGYEGSGAATYFGVF
HHHCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCCCHHHHHHH
EDFFDTGGFIFRERVKRPPTDPVNAMLSFGYSLLFNNIFSMARLHRLHPYVGFLHADKPA
HHHHHCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHEEEECCCCC
HPALVSDLIEEFRTLVDGLVIALINKRLISPEEFTVARHDDGKPKGCYLSDGARKTFLRE
CHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCEEECCCHHHHHHHH
FENLMHRTTTHPATGYEVTCRRCLDLQVGEFALYLKGEKPYTPYLRR
HHHHHHHCCCCCCCCHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]