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The map label for this gene is 119357836

Identifier: 119357836

GI number: 119357836

Start: 2364700

End: 2365503

Strand: Reverse

Name: 119357836

Synonym: Cpha266_2044

Alternate gene names: NA

Gene position: 2365503-2364700 (Counterclockwise)

Preceding gene: 119357837

Following gene: 119357832

Centisome position: 75.48

GC content: 50.37

Gene sequence:

>804_bases
ATGCGTATAACCCTCGAACTATCCCATCGCAATTCGTCGATAACGCTGCCGATCAATAATTCCTATCTTCTTTCTTCTCT
CATTTACAATATCGTTGATAAAAGCTCAAGCGAGTATGCCGGGCGGTTGCATGCGCAGGGGTATCGGTTGCAGAATAAGG
CGTTCAAGCTGTTTGCGTTTTCTCCGTTGTGTCCTGCTAACAGGCGGAAGTGGGAGATGCAGGATGATGGTACCATGAGT
ACGAGGGAGCGGGTGTTGCATTTTACCATTTCATCTCCGAAAAGCGAGTTTATCGAGCATCTGGTGGTAGGGTTGCTGCA
TGAGCCTTATGTTTTTGTCGGCAGGGAGCGGTTCAGGGTTGAGTGTGTCCGGAGGCTTGACTGTCCTGAAATATCCGGCG
ATATGCGCTTTATCGCTTTGTCGCCTGTTGTTTGTGCGACGAAGCATGCCGGCGATTTGTATGCGCAGTATCTTTTTCCC
GGCGATGATGATTTCGAGCGGGTGCTGTTCGATAATCTTTGCCGGAAGTTTGAGGCGCTTCATGGCAGGCGGTTTGATGG
CGATAATGGCAATTTTCATTTTACGCTCGATCAGGATTATGTGGTTCGAAAAAACGGCAAGGTGCAGAAGCTGATTACCA
TCAAGGAGGGTAAGCCGGATGAGACCAGGGTGAAGGGTCTGCTTGCGCCGTTCCGGCTTGTGGCTCCGGCAGAGTTGATG
GAGGTGGGGTATGAGTGCGGTTTTGGGGAGCGTAATTCGCAGGGCTTCGGTTTGGTGAAGGTTGACGATTGTGTTAGGTG
TTAA

Upstream 100 bases:

>100_bases
AAAACAAGTGAAATTATTGATCATGATTTGGAAGAATATGCTTTTTACAAGTATTTCGATGATTATGGATCACTCTGTAA
GTCATGAAATGTAAAATGTT

Downstream 100 bases:

>100_bases
GAAAAGAGGATGAAGAGGGTGTAGAGATTTTGAATTATGAATTCTGGGTTTTGGATTGAAGATTGAAGAGAAGAGTTTTG
CCCACGAATTACACGAATTT

Product: CRISPR-associated Cas family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 267; Mature: 267

Protein sequence:

>267_residues
MRITLELSHRNSSITLPINNSYLLSSLIYNIVDKSSSEYAGRLHAQGYRLQNKAFKLFAFSPLCPANRRKWEMQDDGTMS
TRERVLHFTISSPKSEFIEHLVVGLLHEPYVFVGRERFRVECVRRLDCPEISGDMRFIALSPVVCATKHAGDLYAQYLFP
GDDDFERVLFDNLCRKFEALHGRRFDGDNGNFHFTLDQDYVVRKNGKVQKLITIKEGKPDETRVKGLLAPFRLVAPAELM
EVGYECGFGERNSQGFGLVKVDDCVRC

Sequences:

>Translated_267_residues
MRITLELSHRNSSITLPINNSYLLSSLIYNIVDKSSSEYAGRLHAQGYRLQNKAFKLFAFSPLCPANRRKWEMQDDGTMS
TRERVLHFTISSPKSEFIEHLVVGLLHEPYVFVGRERFRVECVRRLDCPEISGDMRFIALSPVVCATKHAGDLYAQYLFP
GDDDFERVLFDNLCRKFEALHGRRFDGDNGNFHFTLDQDYVVRKNGKVQKLITIKEGKPDETRVKGLLAPFRLVAPAELM
EVGYECGFGERNSQGFGLVKVDDCVRC
>Mature_267_residues
MRITLELSHRNSSITLPINNSYLLSSLIYNIVDKSSSEYAGRLHAQGYRLQNKAFKLFAFSPLCPANRRKWEMQDDGTMS
TRERVLHFTISSPKSEFIEHLVVGLLHEPYVFVGRERFRVECVRRLDCPEISGDMRFIALSPVVCATKHAGDLYAQYLFP
GDDDFERVLFDNLCRKFEALHGRRFDGDNGNFHFTLDQDYVVRKNGKVQKLITIKEGKPDETRVKGLLAPFRLVAPAELM
EVGYECGFGERNSQGFGLVKVDDCVRC

Specific function: Unknown

COG id: COG1583

COG function: function code L; Uncharacterized protein predicted to be involved in DNA repair (RAMP superfamily)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010156
- InterPro:   IPR002743 [H]

Pfam domain/function: PF01881 DUF57 [H]

EC number: NA

Molecular weight: Translated: 30582; Mature: 30582

Theoretical pI: Translated: 8.01; Mature: 8.01

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.0 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
3.0 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRITLELSHRNSSITLPINNSYLLSSLIYNIVDKSSSEYAGRLHAQGYRLQNKAFKLFAF
CEEEEEEECCCCEEEEEECCHHHHHHHHHHHHCCCCCHHHCCHHCCCEEECCCEEEEEEE
SPLCPANRRKWEMQDDGTMSTRERVLHFTISSPKSEFIEHLVVGLLHEPYVFVGRERFRV
CCCCCCCCCEEECCCCCCCCCCEEEEEEEECCCHHHHHHHHHHHHHCCCEEEECCHHHHH
ECVRRLDCPEISGDMRFIALSPVVCATKHAGDLYAQYLFPGDDDFERVLFDNLCRKFEAL
HHHHHCCCCCCCCCEEEEEECCEEEECCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHH
HGRRFDGDNGNFHFTLDQDYVVRKNGKVQKLITIKEGKPDETRVKGLLAPFRLVAPAELM
CCCCCCCCCCCEEEEECCCEEEECCCCEEEEEEEECCCCCHHHHHHHHHHHHHCCCHHHH
EVGYECGFGERNSQGFGLVKVDDCVRC
HCCHHCCCCCCCCCCEEEEEHHHHHCC
>Mature Secondary Structure
MRITLELSHRNSSITLPINNSYLLSSLIYNIVDKSSSEYAGRLHAQGYRLQNKAFKLFAF
CEEEEEEECCCCEEEEEECCHHHHHHHHHHHHCCCCCHHHCCHHCCCEEECCCEEEEEEE
SPLCPANRRKWEMQDDGTMSTRERVLHFTISSPKSEFIEHLVVGLLHEPYVFVGRERFRV
CCCCCCCCCEEECCCCCCCCCCEEEEEEEECCCHHHHHHHHHHHHHCCCEEEECCHHHHH
ECVRRLDCPEISGDMRFIALSPVVCATKHAGDLYAQYLFPGDDDFERVLFDNLCRKFEAL
HHHHHCCCCCCCCCEEEEEECCEEEECCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHH
HGRRFDGDNGNFHFTLDQDYVVRKNGKVQKLITIKEGKPDETRVKGLLAPFRLVAPAELM
CCCCCCCCCCCEEEEECCCEEEECCCCEEEEEEEECCCCCHHHHHHHHHHHHHCCCHHHH
EVGYECGFGERNSQGFGLVKVDDCVRC
HCCHHCCCCCCCCCCEEEEEHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]