Definition Chlorobium phaeobacteroides DSM 266 chromosome, complete genome.
Accession NC_008639
Length 3,133,902

Click here to switch to the map view.

The map label for this gene is 119357837

Identifier: 119357837

GI number: 119357837

Start: 2365517

End: 2367130

Strand: Reverse

Name: 119357837

Synonym: Cpha266_2045

Alternate gene names: NA

Gene position: 2367130-2365517 (Counterclockwise)

Preceding gene: 119357838

Following gene: 119357836

Centisome position: 75.53

GC content: 34.08

Gene sequence:

>1614_bases
ATGAAAGCAGAAATATTAAATAAAAGAAAGAAATGGCTTGATAAGCCAGCAGCACAATCGCTTGACGATTGGCCAAAGAA
AGCTGATGAACTACAAGGTTTTACAGGTACATTGAAATATTTTGGAATCAAACAAAGTAGCAATGAATATGAAATTAACA
GTATAGGAGCTAATTCTTACTTCAGACAATCGCTTGATCTTTTCAAGGTTGTGCTTGAAAAACAAATTCTCAAAGAAGAT
ATAGGCCTTCCAAGTTTAGAGATGCCCCCTCAGTATGATGCTCTCATCACGATTGTAGGGTTTTCTCCGGAACCAATTAT
GCACACTGTTCTTGCTCTTGCTCCAAATAAAGTTTATCCAATTGCAACCATAGAAAGCGCTGAATACTATAAGGTACCAT
TGAATCCGGAATCGAAACAGCGCGATGGAAAAATATGGTTTTTCGAGACTATCATTAAGCATTATAAAGAAGCACAACAA
TCGATCACAGTAGAGCCAATCGTGAGAAATGTGTCCGCAATTGGATCTCTTGAAACATTTAAGCGGGTTCGTGAGATTAT
TCAAGCTACAAAAGAAAATAACCTTAATGCTAAAATAGCACTCGATATTACAGGGGGGAAAAAATCTGCGGATGCATCGG
CATTTCTCATAGCGGCAATTGAGGAGGATATTGATATTTACTACGTTGATTTTGAAGACTATACTGGCGCCAAAGCTTGC
TGCGGAACAGAGTTTCTTAATAAGCTTGATAATCCATATAATATTTATAATATTCAGCTTTTAAATAAGGCAAAAGAGCT
ATTTAAGTATCATAATTATCAAGCGGCAGCACAAATATTTTCAGAAATTGATGAAAGGCTGTCTTCAAATGAATTAGATA
ATCCTGTAAAGTTTTATCTTGATGATGAACGGTCAAAAGTTGATAAAATGAAGAATGCAGCAATCTGTTATATGTATTGG
GATCGGTTTGATTACGAGTGCGCTCAGGAATGTCAATCAGTTTTATCGGACAAACAAAAAACACAGCTCAATAATTTAAT
ATTATTTGAAGGAATAGGCACAAAAAAAGAAAGATATCAATCATGTTATCTATATGACTTTATTGTTGACAGAATTCTTA
GTGCAAAAAGAAGGGCTTTATCAGATATATCTCTGTATGAGTATGAAGGCGACTATCATGATGCTGTTTTCCGGTACGCG
CAATGTCTTGAGATATTAATAGAAACTTACATTACAAGAAAAGTCTCAAATTATGATCCTGATGTTAAAAGTAAATCGAT
ATATAGTATAAGTGGAAAGCGTGAACTTGTTTTTAAAGGAAGAAAAAAATCAGAAAAAGATAATGATGGTAATAGGATAG
ACTTTCAAATGGATCCGTTAGATGATCCGGAAAATGAGTTGAGAAAAAAAACAAAAAGTTTGAGTGAACGTCGTGATGAT
TTTGCGCATGTTCGGATACAAACACAAAAAAGTAATATACAAGAAGCCGAAGAAGTGATCATGAAATTCATGGAAATTGT
TTTTGAGAAAACAAGTGAAATTATTGATCATGATTTGGAAGAATATGCTTTTTACAAGTATTTCGATGATTATGGATCAC
TCTGTAAGTCATGA

Upstream 100 bases:

>100_bases
TAAGTGGTTTTATAAAACAAAAGGGTGAAGAAGTAAAAATAAAAATTACTAAAATTGAAAATGGTAAAATTTTAGAGGCA
AAACTGCTTTGATAAAAGTT

Downstream 100 bases:

>100_bases
AATGTAAAATGTTATGCGTATAACCCTCGAACTATCCCATCGCAATTCGTCGATAACGCTGCCGATCAATAATTCCTATC
TTCTTTCTTCTCTCATTTAC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 537; Mature: 537

Protein sequence:

>537_residues
MKAEILNKRKKWLDKPAAQSLDDWPKKADELQGFTGTLKYFGIKQSSNEYEINSIGANSYFRQSLDLFKVVLEKQILKED
IGLPSLEMPPQYDALITIVGFSPEPIMHTVLALAPNKVYPIATIESAEYYKVPLNPESKQRDGKIWFFETIIKHYKEAQQ
SITVEPIVRNVSAIGSLETFKRVREIIQATKENNLNAKIALDITGGKKSADASAFLIAAIEEDIDIYYVDFEDYTGAKAC
CGTEFLNKLDNPYNIYNIQLLNKAKELFKYHNYQAAAQIFSEIDERLSSNELDNPVKFYLDDERSKVDKMKNAAICYMYW
DRFDYECAQECQSVLSDKQKTQLNNLILFEGIGTKKERYQSCYLYDFIVDRILSAKRRALSDISLYEYEGDYHDAVFRYA
QCLEILIETYITRKVSNYDPDVKSKSIYSISGKRELVFKGRKKSEKDNDGNRIDFQMDPLDDPENELRKKTKSLSERRDD
FAHVRIQTQKSNIQEAEEVIMKFMEIVFEKTSEIIDHDLEEYAFYKYFDDYGSLCKS

Sequences:

>Translated_537_residues
MKAEILNKRKKWLDKPAAQSLDDWPKKADELQGFTGTLKYFGIKQSSNEYEINSIGANSYFRQSLDLFKVVLEKQILKED
IGLPSLEMPPQYDALITIVGFSPEPIMHTVLALAPNKVYPIATIESAEYYKVPLNPESKQRDGKIWFFETIIKHYKEAQQ
SITVEPIVRNVSAIGSLETFKRVREIIQATKENNLNAKIALDITGGKKSADASAFLIAAIEEDIDIYYVDFEDYTGAKAC
CGTEFLNKLDNPYNIYNIQLLNKAKELFKYHNYQAAAQIFSEIDERLSSNELDNPVKFYLDDERSKVDKMKNAAICYMYW
DRFDYECAQECQSVLSDKQKTQLNNLILFEGIGTKKERYQSCYLYDFIVDRILSAKRRALSDISLYEYEGDYHDAVFRYA
QCLEILIETYITRKVSNYDPDVKSKSIYSISGKRELVFKGRKKSEKDNDGNRIDFQMDPLDDPENELRKKTKSLSERRDD
FAHVRIQTQKSNIQEAEEVIMKFMEIVFEKTSEIIDHDLEEYAFYKYFDDYGSLCKS
>Mature_537_residues
MKAEILNKRKKWLDKPAAQSLDDWPKKADELQGFTGTLKYFGIKQSSNEYEINSIGANSYFRQSLDLFKVVLEKQILKED
IGLPSLEMPPQYDALITIVGFSPEPIMHTVLALAPNKVYPIATIESAEYYKVPLNPESKQRDGKIWFFETIIKHYKEAQQ
SITVEPIVRNVSAIGSLETFKRVREIIQATKENNLNAKIALDITGGKKSADASAFLIAAIEEDIDIYYVDFEDYTGAKAC
CGTEFLNKLDNPYNIYNIQLLNKAKELFKYHNYQAAAQIFSEIDERLSSNELDNPVKFYLDDERSKVDKMKNAAICYMYW
DRFDYECAQECQSVLSDKQKTQLNNLILFEGIGTKKERYQSCYLYDFIVDRILSAKRRALSDISLYEYEGDYHDAVFRYA
QCLEILIETYITRKVSNYDPDVKSKSIYSISGKRELVFKGRKKSEKDNDGNRIDFQMDPLDDPENELRKKTKSLSERRDD
FAHVRIQTQKSNIQEAEEVIMKFMEIVFEKTSEIIDHDLEEYAFYKYFDDYGSLCKS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 62372; Mature: 62372

Theoretical pI: Translated: 5.01; Mature: 5.01

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKAEILNKRKKWLDKPAAQSLDDWPKKADELQGFTGTLKYFGIKQSSNEYEINSIGANSY
CCCHHHHHHHHHHCCHHHCCHHHHHHHHHHCCCCCCCHHEEEEECCCCCEEEEECCCHHH
FRQSLDLFKVVLEKQILKEDIGLPSLEMPPQYDALITIVGFSPEPIMHTVLALAPNKVYP
HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHCCCCEEE
IATIESAEYYKVPLNPESKQRDGKIWFFETIIKHYKEAQQSITVEPIVRNVSAIGSLETF
EEEECCCCEEECCCCCCCCCCCCCEEHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCHHHH
KRVREIIQATKENNLNAKIALDITGGKKSADASAFLIAAIEEDIDIYYVDFEDYTGAKAC
HHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCEEEEEEEECCCEEEEEECCCCCCCHHH
CGTEFLNKLDNPYNIYNIQLLNKAKELFKYHNYQAAAQIFSEIDERLSSNELDNPVKFYL
HHHHHHHHCCCCCEEEEEHHHHHHHHHHHHHCHHHHHHHHHHHHHHHCCCCCCCCEEEEE
DDERSKVDKMKNAAICYMYWDRFDYECAQECQSVLSDKQKTQLNNLILFEGIGTKKERYQ
CCHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHHCCHHHHHHCCEEEEECCCCHHHHHH
SCYLYDFIVDRILSAKRRALSDISLYEYEGDYHDAVFRYAQCLEILIETYITRKVSNYDP
HHHHHHHHHHHHHHHHHHHHHCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
DVKSKSIYSISGKRELVFKGRKKSEKDNDGNRIDFQMDPLDDPENELRKKTKSLSERRDD
CCCCCCEEEECCCEEEEECCCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHCCC
FAHVRIQTQKSNIQEAEEVIMKFMEIVFEKTSEIIDHDLEEYAFYKYFDDYGSLCKS
CEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MKAEILNKRKKWLDKPAAQSLDDWPKKADELQGFTGTLKYFGIKQSSNEYEINSIGANSY
CCCHHHHHHHHHHCCHHHCCHHHHHHHHHHCCCCCCCHHEEEEECCCCCEEEEECCCHHH
FRQSLDLFKVVLEKQILKEDIGLPSLEMPPQYDALITIVGFSPEPIMHTVLALAPNKVYP
HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHCCCCEEE
IATIESAEYYKVPLNPESKQRDGKIWFFETIIKHYKEAQQSITVEPIVRNVSAIGSLETF
EEEECCCCEEECCCCCCCCCCCCCEEHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCHHHH
KRVREIIQATKENNLNAKIALDITGGKKSADASAFLIAAIEEDIDIYYVDFEDYTGAKAC
HHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCEEEEEEEECCCEEEEEECCCCCCCHHH
CGTEFLNKLDNPYNIYNIQLLNKAKELFKYHNYQAAAQIFSEIDERLSSNELDNPVKFYL
HHHHHHHHCCCCCEEEEEHHHHHHHHHHHHHCHHHHHHHHHHHHHHHCCCCCCCCEEEEE
DDERSKVDKMKNAAICYMYWDRFDYECAQECQSVLSDKQKTQLNNLILFEGIGTKKERYQ
CCHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHHCCHHHHHHCCEEEEECCCCHHHHHH
SCYLYDFIVDRILSAKRRALSDISLYEYEGDYHDAVFRYAQCLEILIETYITRKVSNYDP
HHHHHHHHHHHHHHHHHHHHHCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
DVKSKSIYSISGKRELVFKGRKKSEKDNDGNRIDFQMDPLDDPENELRKKTKSLSERRDD
CCCCCCEEEECCCEEEEECCCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHCCC
FAHVRIQTQKSNIQEAEEVIMKFMEIVFEKTSEIIDHDLEEYAFYKYFDDYGSLCKS
CEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA