| Definition | Chlorobium phaeobacteroides DSM 266 chromosome, complete genome. |
|---|---|
| Accession | NC_008639 |
| Length | 3,133,902 |
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The map label for this gene is 119357837
Identifier: 119357837
GI number: 119357837
Start: 2365517
End: 2367130
Strand: Reverse
Name: 119357837
Synonym: Cpha266_2045
Alternate gene names: NA
Gene position: 2367130-2365517 (Counterclockwise)
Preceding gene: 119357838
Following gene: 119357836
Centisome position: 75.53
GC content: 34.08
Gene sequence:
>1614_bases ATGAAAGCAGAAATATTAAATAAAAGAAAGAAATGGCTTGATAAGCCAGCAGCACAATCGCTTGACGATTGGCCAAAGAA AGCTGATGAACTACAAGGTTTTACAGGTACATTGAAATATTTTGGAATCAAACAAAGTAGCAATGAATATGAAATTAACA GTATAGGAGCTAATTCTTACTTCAGACAATCGCTTGATCTTTTCAAGGTTGTGCTTGAAAAACAAATTCTCAAAGAAGAT ATAGGCCTTCCAAGTTTAGAGATGCCCCCTCAGTATGATGCTCTCATCACGATTGTAGGGTTTTCTCCGGAACCAATTAT GCACACTGTTCTTGCTCTTGCTCCAAATAAAGTTTATCCAATTGCAACCATAGAAAGCGCTGAATACTATAAGGTACCAT TGAATCCGGAATCGAAACAGCGCGATGGAAAAATATGGTTTTTCGAGACTATCATTAAGCATTATAAAGAAGCACAACAA TCGATCACAGTAGAGCCAATCGTGAGAAATGTGTCCGCAATTGGATCTCTTGAAACATTTAAGCGGGTTCGTGAGATTAT TCAAGCTACAAAAGAAAATAACCTTAATGCTAAAATAGCACTCGATATTACAGGGGGGAAAAAATCTGCGGATGCATCGG CATTTCTCATAGCGGCAATTGAGGAGGATATTGATATTTACTACGTTGATTTTGAAGACTATACTGGCGCCAAAGCTTGC TGCGGAACAGAGTTTCTTAATAAGCTTGATAATCCATATAATATTTATAATATTCAGCTTTTAAATAAGGCAAAAGAGCT ATTTAAGTATCATAATTATCAAGCGGCAGCACAAATATTTTCAGAAATTGATGAAAGGCTGTCTTCAAATGAATTAGATA ATCCTGTAAAGTTTTATCTTGATGATGAACGGTCAAAAGTTGATAAAATGAAGAATGCAGCAATCTGTTATATGTATTGG GATCGGTTTGATTACGAGTGCGCTCAGGAATGTCAATCAGTTTTATCGGACAAACAAAAAACACAGCTCAATAATTTAAT ATTATTTGAAGGAATAGGCACAAAAAAAGAAAGATATCAATCATGTTATCTATATGACTTTATTGTTGACAGAATTCTTA GTGCAAAAAGAAGGGCTTTATCAGATATATCTCTGTATGAGTATGAAGGCGACTATCATGATGCTGTTTTCCGGTACGCG CAATGTCTTGAGATATTAATAGAAACTTACATTACAAGAAAAGTCTCAAATTATGATCCTGATGTTAAAAGTAAATCGAT ATATAGTATAAGTGGAAAGCGTGAACTTGTTTTTAAAGGAAGAAAAAAATCAGAAAAAGATAATGATGGTAATAGGATAG ACTTTCAAATGGATCCGTTAGATGATCCGGAAAATGAGTTGAGAAAAAAAACAAAAAGTTTGAGTGAACGTCGTGATGAT TTTGCGCATGTTCGGATACAAACACAAAAAAGTAATATACAAGAAGCCGAAGAAGTGATCATGAAATTCATGGAAATTGT TTTTGAGAAAACAAGTGAAATTATTGATCATGATTTGGAAGAATATGCTTTTTACAAGTATTTCGATGATTATGGATCAC TCTGTAAGTCATGA
Upstream 100 bases:
>100_bases TAAGTGGTTTTATAAAACAAAAGGGTGAAGAAGTAAAAATAAAAATTACTAAAATTGAAAATGGTAAAATTTTAGAGGCA AAACTGCTTTGATAAAAGTT
Downstream 100 bases:
>100_bases AATGTAAAATGTTATGCGTATAACCCTCGAACTATCCCATCGCAATTCGTCGATAACGCTGCCGATCAATAATTCCTATC TTCTTTCTTCTCTCATTTAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 537; Mature: 537
Protein sequence:
>537_residues MKAEILNKRKKWLDKPAAQSLDDWPKKADELQGFTGTLKYFGIKQSSNEYEINSIGANSYFRQSLDLFKVVLEKQILKED IGLPSLEMPPQYDALITIVGFSPEPIMHTVLALAPNKVYPIATIESAEYYKVPLNPESKQRDGKIWFFETIIKHYKEAQQ SITVEPIVRNVSAIGSLETFKRVREIIQATKENNLNAKIALDITGGKKSADASAFLIAAIEEDIDIYYVDFEDYTGAKAC CGTEFLNKLDNPYNIYNIQLLNKAKELFKYHNYQAAAQIFSEIDERLSSNELDNPVKFYLDDERSKVDKMKNAAICYMYW DRFDYECAQECQSVLSDKQKTQLNNLILFEGIGTKKERYQSCYLYDFIVDRILSAKRRALSDISLYEYEGDYHDAVFRYA QCLEILIETYITRKVSNYDPDVKSKSIYSISGKRELVFKGRKKSEKDNDGNRIDFQMDPLDDPENELRKKTKSLSERRDD FAHVRIQTQKSNIQEAEEVIMKFMEIVFEKTSEIIDHDLEEYAFYKYFDDYGSLCKS
Sequences:
>Translated_537_residues MKAEILNKRKKWLDKPAAQSLDDWPKKADELQGFTGTLKYFGIKQSSNEYEINSIGANSYFRQSLDLFKVVLEKQILKED IGLPSLEMPPQYDALITIVGFSPEPIMHTVLALAPNKVYPIATIESAEYYKVPLNPESKQRDGKIWFFETIIKHYKEAQQ SITVEPIVRNVSAIGSLETFKRVREIIQATKENNLNAKIALDITGGKKSADASAFLIAAIEEDIDIYYVDFEDYTGAKAC CGTEFLNKLDNPYNIYNIQLLNKAKELFKYHNYQAAAQIFSEIDERLSSNELDNPVKFYLDDERSKVDKMKNAAICYMYW DRFDYECAQECQSVLSDKQKTQLNNLILFEGIGTKKERYQSCYLYDFIVDRILSAKRRALSDISLYEYEGDYHDAVFRYA QCLEILIETYITRKVSNYDPDVKSKSIYSISGKRELVFKGRKKSEKDNDGNRIDFQMDPLDDPENELRKKTKSLSERRDD FAHVRIQTQKSNIQEAEEVIMKFMEIVFEKTSEIIDHDLEEYAFYKYFDDYGSLCKS >Mature_537_residues MKAEILNKRKKWLDKPAAQSLDDWPKKADELQGFTGTLKYFGIKQSSNEYEINSIGANSYFRQSLDLFKVVLEKQILKED IGLPSLEMPPQYDALITIVGFSPEPIMHTVLALAPNKVYPIATIESAEYYKVPLNPESKQRDGKIWFFETIIKHYKEAQQ SITVEPIVRNVSAIGSLETFKRVREIIQATKENNLNAKIALDITGGKKSADASAFLIAAIEEDIDIYYVDFEDYTGAKAC CGTEFLNKLDNPYNIYNIQLLNKAKELFKYHNYQAAAQIFSEIDERLSSNELDNPVKFYLDDERSKVDKMKNAAICYMYW DRFDYECAQECQSVLSDKQKTQLNNLILFEGIGTKKERYQSCYLYDFIVDRILSAKRRALSDISLYEYEGDYHDAVFRYA QCLEILIETYITRKVSNYDPDVKSKSIYSISGKRELVFKGRKKSEKDNDGNRIDFQMDPLDDPENELRKKTKSLSERRDD FAHVRIQTQKSNIQEAEEVIMKFMEIVFEKTSEIIDHDLEEYAFYKYFDDYGSLCKS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 62372; Mature: 62372
Theoretical pI: Translated: 5.01; Mature: 5.01
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKAEILNKRKKWLDKPAAQSLDDWPKKADELQGFTGTLKYFGIKQSSNEYEINSIGANSY CCCHHHHHHHHHHCCHHHCCHHHHHHHHHHCCCCCCCHHEEEEECCCCCEEEEECCCHHH FRQSLDLFKVVLEKQILKEDIGLPSLEMPPQYDALITIVGFSPEPIMHTVLALAPNKVYP HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHCCCCEEE IATIESAEYYKVPLNPESKQRDGKIWFFETIIKHYKEAQQSITVEPIVRNVSAIGSLETF EEEECCCCEEECCCCCCCCCCCCCEEHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCHHHH KRVREIIQATKENNLNAKIALDITGGKKSADASAFLIAAIEEDIDIYYVDFEDYTGAKAC HHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCEEEEEEEECCCEEEEEECCCCCCCHHH CGTEFLNKLDNPYNIYNIQLLNKAKELFKYHNYQAAAQIFSEIDERLSSNELDNPVKFYL HHHHHHHHCCCCCEEEEEHHHHHHHHHHHHHCHHHHHHHHHHHHHHHCCCCCCCCEEEEE DDERSKVDKMKNAAICYMYWDRFDYECAQECQSVLSDKQKTQLNNLILFEGIGTKKERYQ CCHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHHCCHHHHHHCCEEEEECCCCHHHHHH SCYLYDFIVDRILSAKRRALSDISLYEYEGDYHDAVFRYAQCLEILIETYITRKVSNYDP HHHHHHHHHHHHHHHHHHHHHCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCC DVKSKSIYSISGKRELVFKGRKKSEKDNDGNRIDFQMDPLDDPENELRKKTKSLSERRDD CCCCCCEEEECCCEEEEECCCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHCCC FAHVRIQTQKSNIQEAEEVIMKFMEIVFEKTSEIIDHDLEEYAFYKYFDDYGSLCKS CEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MKAEILNKRKKWLDKPAAQSLDDWPKKADELQGFTGTLKYFGIKQSSNEYEINSIGANSY CCCHHHHHHHHHHCCHHHCCHHHHHHHHHHCCCCCCCHHEEEEECCCCCEEEEECCCHHH FRQSLDLFKVVLEKQILKEDIGLPSLEMPPQYDALITIVGFSPEPIMHTVLALAPNKVYP HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHCCCCEEE IATIESAEYYKVPLNPESKQRDGKIWFFETIIKHYKEAQQSITVEPIVRNVSAIGSLETF EEEECCCCEEECCCCCCCCCCCCCEEHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCHHHH KRVREIIQATKENNLNAKIALDITGGKKSADASAFLIAAIEEDIDIYYVDFEDYTGAKAC HHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCEEEEEEEECCCEEEEEECCCCCCCHHH CGTEFLNKLDNPYNIYNIQLLNKAKELFKYHNYQAAAQIFSEIDERLSSNELDNPVKFYL HHHHHHHHCCCCCEEEEEHHHHHHHHHHHHHCHHHHHHHHHHHHHHHCCCCCCCCEEEEE DDERSKVDKMKNAAICYMYWDRFDYECAQECQSVLSDKQKTQLNNLILFEGIGTKKERYQ CCHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHHCCHHHHHHCCEEEEECCCCHHHHHH SCYLYDFIVDRILSAKRRALSDISLYEYEGDYHDAVFRYAQCLEILIETYITRKVSNYDP HHHHHHHHHHHHHHHHHHHHHCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCC DVKSKSIYSISGKRELVFKGRKKSEKDNDGNRIDFQMDPLDDPENELRKKTKSLSERRDD CCCCCCEEEECCCEEEEECCCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHCCC FAHVRIQTQKSNIQEAEEVIMKFMEIVFEKTSEIIDHDLEEYAFYKYFDDYGSLCKS CEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA