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The map label for this gene is ylbK [H]

Identifier: 119357825

GI number: 119357825

Start: 2350519

End: 2353290

Strand: Direct

Name: ylbK [H]

Synonym: Cpha266_2033

Alternate gene names: 119357825

Gene position: 2350519-2353290 (Clockwise)

Preceding gene: 119357823

Following gene: 119357826

Centisome position: 75.0

GC content: 49.6

Gene sequence:

>2772_bases
TTGTCCATCAAAACAGAATGTAAACGCCTTGCTTTTCTTGCGGCGCTCCTCCTGATCGAAGCGCTCATGCCCGCTCTTCT
TTTTGCCGCCCCCTCCGCCATCGTCTACCCCGACACCCTTTCGCTGCCCTCACGACGTTATGCCATGCAGCCGTTCATGA
GACCTGCCCGAAAAACCGTTGGACTCGCACTATCCGGTGGAGGAGCCAATTGTATCGCGCAGATCGGCGTACTCAAGGCG
CTTGAAGAAGAGGGAATACCTGTCGATTTTATTGCAGGAACAAGCATGGGAGCGGTCATCGGGGGCCTTTACAGTTGCGG
ATACACCCCTGACGAACTTGAAGATATAGCCATATCGCTCCCCTGGCAATCCATTCTCTCGCTCAAAGACACCTATCCGC
GTTCATCGATATTTCTCGAACAACAGAAAATACGCGACCGGGCAAGTATAGCCATTCGCTTCAACAAGCTGAAACTGGTC
GTACCAAAACTTCTCAACTCCTCGCAAACACTCACCGGCGCACTCGATCTGCTGGTGCTTAACAGTCTCTACCACCCTCA
ACAGCAGTTCAACTCTCTGCCGGTAAACTTCAGAGCCGTCGCTACCGACCTGGTTACAGGAAAAAGAATCACCCTGACCT
CCGGATCACTTTCAGAAGCAATGCTCGCAAGCAGCACCATACCAATCCTGTTTGAACCGATAAAACGCGATGGCTACGAA
CTTGTCGACGGAGGACTTGTTGCCAACCTGCCGGTTGATGAGCTTGACGCGTTCAACGCATCCTGTAAAATCGCAGTCGA
TACCCATGGCGGCATGTACGCAAAGATTGAAGAAATAGACTCCCCGTGGAAGGCGGCAGACCAGGCCATGACCATTCTCA
CCGGCCTGCAATATCCGGCTCAGCTTGCCAAAGCCGATATCGTCATAACGCCTGACCTCTCCGCTCACAAAGCCACAGAC
TTTTCCGATTTTAAAACACTCATTGAAAACGGCTATCAAAAAGGGAAGGTTCTTACCGGAACCATAAAACGAGCGATTCA
ATCCGTTGAAAAAAAAGGCACCCCCCTTCACCATTTCAGAAAAACCATCACCATAACCGGGGATGAAGAGGTCAGGGCCG
AATATGCAGAAGTTGTCAGCAGAATTATGCATAACGGCTCCTCCCTTGAACAAACACTGCAAAAGCTGCTGGAAACCGAT
CTCTTTTCCCGTATCTATGCCCATCTCGACAAACACGGGAAAAAAGTTGACATTCACCTTGACCCGCTGCCCCGCATCAA
ACAGATCATTATATCAGGAGGCCCTGAAACCAGCATGACGGACAGTGAACGCCAGGCATGCTTCAAACCCGTCACATCAA
GCATCTATACCAATAGTGCCGGAACCAGGGCTCTTGAAGAACTCATCCGCCTGTATCGCCGGAAAGGGTTCAGTCTCGTT
ACTCTCGAAACCTGCACCATGAGTGAAAACGCCCTTCATATCAAGCTCTCGACAGGCAGAGCTGACGATATTGCAATGCG
GCAGGACAAACCGACAACCTCCCTGGTACCGATAACCCGGGAAATCAAGATGAGCACGAAAAAAGCCCTGCAACTCGCAG
ACGCTGAAGAATCGGTAGATAATCTCTATGGAACGGGAGCTTTCAGCAGCGTTGCCATAGCGTCGGAACAAACATCGTCA
GATAACGAACGAACAAAAACCATCCTGCAGTTTTCTCTCAACAACAAACCATCATCCGTACTTCGACTCGGAGTACGATA
TGACGAAACAGAGAACGCGCAATTTCTTGTTGATTACAGAAATGAAAATGTCGGGGGAACAACCGGTTCAATAGGAGGAT
GGATAAAGGCAGGCAAAAAGAACAGCATGGCCACCTTTGAGTACACCATGCCCCGTATCGGATCAACCCATTTCACGCTT
TTCTCAAAACTCTTTTTCGATCAACGGGAATTCGAAACAAGAGACCTCCACTTTTCAAAAGACTTCTCGGGATTTTCTTC
AGAAACAGGATCAAGCTACGGCATCCAGCGATACGGCATAACCAGCTCGTTCGGCACCAGAATAAGAAAAAACGGCCTCT
TCGTGTTTGACGTAACGTTACAAAACGCACAATCATATCCGGACTCGGACAACACCGAAATTTTTCGGACCGACAACCTC
AACATGCTTTCGTTCGGCATGCAGTTCACCCTTGATTCACGAAACAACTCCCTGATTCCGACCGAAGGACGATACACCAA
CCTCAGGTATGCCGTAACCCCTCCGATACTTGATGCAAACGAAACATACTGGCAAGTATCGGGCACTCACGAAGAAAACA
TTCCCTTGAGCAGTTCAGCAACCGTGCAACTTTCCGGCATGTTCGGATTAAGCAGCAGCTCCATGCCCCTTTCAGAGAAA
TTTTATCTCGGAGGCCAGGGCAATCTTTACAGCAGAAGATTTATCGGTCTGAAACAAAACGACCTGATAGGAAACAACAT
GGCGGCAGCAGGCATACAGTTTCGATATACGCCACCCTTCGAAATTCTGTTCCCCGCATCTTTTCTCCTGCACTACTCGA
TCGGCAATGCCTGGGAACGTCGGGATCAAATCTCATTTGCCCGGCTGATTCAGGGAATCGGAGCCGGTCTGATGTGGGAT
ACGCCCATCGGGCCCGCAAGATTCACCGTCTCGAAAGCCTTTGCGTTTCTGCCGTATGCCGACAGCAACGAAACCTCATC
ATTAAGATTTTCCGATACCATACTCTATTTCAGTCTGGGACATGATTTTTGA

Upstream 100 bases:

>100_bases
GTTATAAATTCAGGTTCAAGATATAAACTCATTGGCAGATCTCAAAACAAACCAGACAGCAGATTCATACACGCTGCTTT
TCCGACAGGAGCAATACCAA

Downstream 100 bases:

>100_bases
ACGAAACTTTTTCTTACTATGGTTCACCGACAGATACGGTTTTTTGCATAACCCCCATACCCCCATGTTGTGGATCAACT
GAAAAAGCCTCATATTCTGC

Product: patatin

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 923; Mature: 922

Protein sequence:

>923_residues
MSIKTECKRLAFLAALLLIEALMPALLFAAPSAIVYPDTLSLPSRRYAMQPFMRPARKTVGLALSGGGANCIAQIGVLKA
LEEEGIPVDFIAGTSMGAVIGGLYSCGYTPDELEDIAISLPWQSILSLKDTYPRSSIFLEQQKIRDRASIAIRFNKLKLV
VPKLLNSSQTLTGALDLLVLNSLYHPQQQFNSLPVNFRAVATDLVTGKRITLTSGSLSEAMLASSTIPILFEPIKRDGYE
LVDGGLVANLPVDELDAFNASCKIAVDTHGGMYAKIEEIDSPWKAADQAMTILTGLQYPAQLAKADIVITPDLSAHKATD
FSDFKTLIENGYQKGKVLTGTIKRAIQSVEKKGTPLHHFRKTITITGDEEVRAEYAEVVSRIMHNGSSLEQTLQKLLETD
LFSRIYAHLDKHGKKVDIHLDPLPRIKQIIISGGPETSMTDSERQACFKPVTSSIYTNSAGTRALEELIRLYRRKGFSLV
TLETCTMSENALHIKLSTGRADDIAMRQDKPTTSLVPITREIKMSTKKALQLADAEESVDNLYGTGAFSSVAIASEQTSS
DNERTKTILQFSLNNKPSSVLRLGVRYDETENAQFLVDYRNENVGGTTGSIGGWIKAGKKNSMATFEYTMPRIGSTHFTL
FSKLFFDQREFETRDLHFSKDFSGFSSETGSSYGIQRYGITSSFGTRIRKNGLFVFDVTLQNAQSYPDSDNTEIFRTDNL
NMLSFGMQFTLDSRNNSLIPTEGRYTNLRYAVTPPILDANETYWQVSGTHEENIPLSSSATVQLSGMFGLSSSSMPLSEK
FYLGGQGNLYSRRFIGLKQNDLIGNNMAAAGIQFRYTPPFEILFPASFLLHYSIGNAWERRDQISFARLIQGIGAGLMWD
TPIGPARFTVSKAFAFLPYADSNETSSLRFSDTILYFSLGHDF

Sequences:

>Translated_923_residues
MSIKTECKRLAFLAALLLIEALMPALLFAAPSAIVYPDTLSLPSRRYAMQPFMRPARKTVGLALSGGGANCIAQIGVLKA
LEEEGIPVDFIAGTSMGAVIGGLYSCGYTPDELEDIAISLPWQSILSLKDTYPRSSIFLEQQKIRDRASIAIRFNKLKLV
VPKLLNSSQTLTGALDLLVLNSLYHPQQQFNSLPVNFRAVATDLVTGKRITLTSGSLSEAMLASSTIPILFEPIKRDGYE
LVDGGLVANLPVDELDAFNASCKIAVDTHGGMYAKIEEIDSPWKAADQAMTILTGLQYPAQLAKADIVITPDLSAHKATD
FSDFKTLIENGYQKGKVLTGTIKRAIQSVEKKGTPLHHFRKTITITGDEEVRAEYAEVVSRIMHNGSSLEQTLQKLLETD
LFSRIYAHLDKHGKKVDIHLDPLPRIKQIIISGGPETSMTDSERQACFKPVTSSIYTNSAGTRALEELIRLYRRKGFSLV
TLETCTMSENALHIKLSTGRADDIAMRQDKPTTSLVPITREIKMSTKKALQLADAEESVDNLYGTGAFSSVAIASEQTSS
DNERTKTILQFSLNNKPSSVLRLGVRYDETENAQFLVDYRNENVGGTTGSIGGWIKAGKKNSMATFEYTMPRIGSTHFTL
FSKLFFDQREFETRDLHFSKDFSGFSSETGSSYGIQRYGITSSFGTRIRKNGLFVFDVTLQNAQSYPDSDNTEIFRTDNL
NMLSFGMQFTLDSRNNSLIPTEGRYTNLRYAVTPPILDANETYWQVSGTHEENIPLSSSATVQLSGMFGLSSSSMPLSEK
FYLGGQGNLYSRRFIGLKQNDLIGNNMAAAGIQFRYTPPFEILFPASFLLHYSIGNAWERRDQISFARLIQGIGAGLMWD
TPIGPARFTVSKAFAFLPYADSNETSSLRFSDTILYFSLGHDF
>Mature_922_residues
SIKTECKRLAFLAALLLIEALMPALLFAAPSAIVYPDTLSLPSRRYAMQPFMRPARKTVGLALSGGGANCIAQIGVLKAL
EEEGIPVDFIAGTSMGAVIGGLYSCGYTPDELEDIAISLPWQSILSLKDTYPRSSIFLEQQKIRDRASIAIRFNKLKLVV
PKLLNSSQTLTGALDLLVLNSLYHPQQQFNSLPVNFRAVATDLVTGKRITLTSGSLSEAMLASSTIPILFEPIKRDGYEL
VDGGLVANLPVDELDAFNASCKIAVDTHGGMYAKIEEIDSPWKAADQAMTILTGLQYPAQLAKADIVITPDLSAHKATDF
SDFKTLIENGYQKGKVLTGTIKRAIQSVEKKGTPLHHFRKTITITGDEEVRAEYAEVVSRIMHNGSSLEQTLQKLLETDL
FSRIYAHLDKHGKKVDIHLDPLPRIKQIIISGGPETSMTDSERQACFKPVTSSIYTNSAGTRALEELIRLYRRKGFSLVT
LETCTMSENALHIKLSTGRADDIAMRQDKPTTSLVPITREIKMSTKKALQLADAEESVDNLYGTGAFSSVAIASEQTSSD
NERTKTILQFSLNNKPSSVLRLGVRYDETENAQFLVDYRNENVGGTTGSIGGWIKAGKKNSMATFEYTMPRIGSTHFTLF
SKLFFDQREFETRDLHFSKDFSGFSSETGSSYGIQRYGITSSFGTRIRKNGLFVFDVTLQNAQSYPDSDNTEIFRTDNLN
MLSFGMQFTLDSRNNSLIPTEGRYTNLRYAVTPPILDANETYWQVSGTHEENIPLSSSATVQLSGMFGLSSSSMPLSEKF
YLGGQGNLYSRRFIGLKQNDLIGNNMAAAGIQFRYTPPFEILFPASFLLHYSIGNAWERRDQISFARLIQGIGAGLMWDT
PIGPARFTVSKAFAFLPYADSNETSSLRFSDTILYFSLGHDF

Specific function: Unknown

COG id: COG1752

COG function: function code R; Predicted esterase of the alpha-beta hydrolase superfamily

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 patatin domain [H]

Homologues:

Organism=Escherichia coli, GI226510936, Length=208, Percent_Identity=30.7692307692308, Blast_Score=100, Evalue=5e-22,
Organism=Caenorhabditis elegans, GI71997299, Length=293, Percent_Identity=25.938566552901, Blast_Score=81, Evalue=3e-15,
Organism=Caenorhabditis elegans, GI71997289, Length=293, Percent_Identity=26.6211604095563, Blast_Score=80, Evalue=4e-15,
Organism=Saccharomyces cerevisiae, GI6323581, Length=61, Percent_Identity=52.4590163934426, Blast_Score=71, Evalue=7e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016035
- InterPro:   IPR001423
- InterPro:   IPR002641 [H]

Pfam domain/function: PF01734 Patatin [H]

EC number: NA

Molecular weight: Translated: 101969; Mature: 101838

Theoretical pI: Translated: 7.07; Mature: 7.07

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSIKTECKRLAFLAALLLIEALMPALLFAAPSAIVYPDTLSLPSRRYAMQPFMRPARKTV
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCCCCCHHHHHHHHHHHHHHHE
GLALSGGGANCIAQIGVLKALEEEGIPVDFIAGTSMGAVIGGLYSCGYTPDELEDIAISL
EEEEECCCHHHHHHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHCCCCHHCHHHEEEEC
PWQSILSLKDTYPRSSIFLEQQKIRDRASIAIRFNKLKLVVPKLLNSSQTLTGALDLLVL
CHHHHHHHHHCCCCHHEEEEHHHHCCCEEEEEEEECCEEEHHHHCCCCCHHHHHHHHHHH
NSLYHPQQQFNSLPVNFRAVATDLVTGKRITLTSGSLSEAMLASSTIPILFEPIKRDGYE
HHHCCCHHHHCCCCCCCEEHHHHHCCCCEEEEECCCHHHHHHHCCCCCEEEECCCCCCCE
LVDGGLVANLPVDELDAFNASCKIAVDTHGGMYAKIEEIDSPWKAADQAMTILTGLQYPA
EECCCEEECCCHHHHHCCCCEEEEEEECCCCEEEEHHHCCCCHHHHHHHHHHHHHCCCCH
QLAKADIVITPDLSAHKATDFSDFKTLIENGYQKGKVLTGTIKRAIQSVEKKGTPLHHFR
HHHCCCEEECCCCCCCCCCCHHHHHHHHHCCCCCCCEEHHHHHHHHHHHHHCCCCHHHEE
KTITITGDEEVRAEYAEVVSRIMHNGSSLEQTLQKLLETDLFSRIYAHLDKHGKKVDIHL
EEEEEECCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEE
DPLPRIKQIIISGGPETSMTDSERQACFKPVTSSIYTNSAGTRALEELIRLYRRKGFSLV
CCCHHHHHHEECCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCEEE
TLETCTMSENALHIKLSTGRADDIAMRQDKPTTSLVPITREIKMSTKKALQLADAEESVD
EEEEEECCCCEEEEEEECCCCCCEEECCCCCCCCEECCHHHHHHHHHHHHHHHCHHHHHH
NLYGTGAFSSVAIASEQTSSDNERTKTILQFSLNNKPSSVLRLGVRYDETENAQFLVDYR
HHCCCCCCCEEEEECCCCCCCCHHEEEEEEEECCCCCCHHEEECCEECCCCCCEEEEEEC
NENVGGTTGSIGGWIKAGKKNSMATFEYTMPRIGSTHFTLFSKLFFDQREFETRDLHFSK
CCCCCCCCCCCCCCEECCCCCCEEEEEEECCCCCCHHHHHHHHHHHCHHCCCCCCCEECC
DFSGFSSETGSSYGIQRYGITSSFGTRIRKNGLFVFDVTLQNAQSYPDSDNTEIFRTDNL
CCCCCCCCCCCCCCEEECCCCHHHHHHHHHCCEEEEEEEECCCCCCCCCCCCEEEEECCC
NMLSFGMQFTLDSRNNSLIPTEGRYTNLRYAVTPPILDANETYWQVSGTHEENIPLSSSA
EEEEECEEEEEECCCCCCCCCCCCEEEEEEEECCCEECCCCCEEEEECCCCCCCCCCCCC
TVQLSGMFGLSSSSMPLSEKFYLGGQGNLYSRRFIGLKQNDLIGNNMAAAGIQFRYTPPF
EEEEEEEECCCCCCCCCCCEEEECCCCCCCCEEEECCCCCCCCCCCEEECCEEEEECCCC
EILFPASFLLHYSIGNAWERRDQISFARLIQGIGAGLMWDTPIGPARFTVSKAFAFLPYA
CEECCHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCEECCCCCCCCEEHHHHEEEEECC
DSNETSSLRFSDTILYFSLGHDF
CCCCCCEEEEEEEEEEEEECCCC
>Mature Secondary Structure 
SIKTECKRLAFLAALLLIEALMPALLFAAPSAIVYPDTLSLPSRRYAMQPFMRPARKTV
CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCCCCCHHHHHHHHHHHHHHHE
GLALSGGGANCIAQIGVLKALEEEGIPVDFIAGTSMGAVIGGLYSCGYTPDELEDIAISL
EEEEECCCHHHHHHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHCCCCHHCHHHEEEEC
PWQSILSLKDTYPRSSIFLEQQKIRDRASIAIRFNKLKLVVPKLLNSSQTLTGALDLLVL
CHHHHHHHHHCCCCHHEEEEHHHHCCCEEEEEEEECCEEEHHHHCCCCCHHHHHHHHHHH
NSLYHPQQQFNSLPVNFRAVATDLVTGKRITLTSGSLSEAMLASSTIPILFEPIKRDGYE
HHHCCCHHHHCCCCCCCEEHHHHHCCCCEEEEECCCHHHHHHHCCCCCEEEECCCCCCCE
LVDGGLVANLPVDELDAFNASCKIAVDTHGGMYAKIEEIDSPWKAADQAMTILTGLQYPA
EECCCEEECCCHHHHHCCCCEEEEEEECCCCEEEEHHHCCCCHHHHHHHHHHHHHCCCCH
QLAKADIVITPDLSAHKATDFSDFKTLIENGYQKGKVLTGTIKRAIQSVEKKGTPLHHFR
HHHCCCEEECCCCCCCCCCCHHHHHHHHHCCCCCCCEEHHHHHHHHHHHHHCCCCHHHEE
KTITITGDEEVRAEYAEVVSRIMHNGSSLEQTLQKLLETDLFSRIYAHLDKHGKKVDIHL
EEEEEECCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEE
DPLPRIKQIIISGGPETSMTDSERQACFKPVTSSIYTNSAGTRALEELIRLYRRKGFSLV
CCCHHHHHHEECCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCEEE
TLETCTMSENALHIKLSTGRADDIAMRQDKPTTSLVPITREIKMSTKKALQLADAEESVD
EEEEEECCCCEEEEEEECCCCCCEEECCCCCCCCEECCHHHHHHHHHHHHHHHCHHHHHH
NLYGTGAFSSVAIASEQTSSDNERTKTILQFSLNNKPSSVLRLGVRYDETENAQFLVDYR
HHCCCCCCCEEEEECCCCCCCCHHEEEEEEEECCCCCCHHEEECCEECCCCCCEEEEEEC
NENVGGTTGSIGGWIKAGKKNSMATFEYTMPRIGSTHFTLFSKLFFDQREFETRDLHFSK
CCCCCCCCCCCCCCEECCCCCCEEEEEEECCCCCCHHHHHHHHHHHCHHCCCCCCCEECC
DFSGFSSETGSSYGIQRYGITSSFGTRIRKNGLFVFDVTLQNAQSYPDSDNTEIFRTDNL
CCCCCCCCCCCCCCEEECCCCHHHHHHHHHCCEEEEEEEECCCCCCCCCCCCEEEEECCC
NMLSFGMQFTLDSRNNSLIPTEGRYTNLRYAVTPPILDANETYWQVSGTHEENIPLSSSA
EEEEECEEEEEECCCCCCCCCCCCEEEEEEEECCCEECCCCCEEEEECCCCCCCCCCCCC
TVQLSGMFGLSSSSMPLSEKFYLGGQGNLYSRRFIGLKQNDLIGNNMAAAGIQFRYTPPF
EEEEEEEECCCCCCCCCCCEEEECCCCCCCCEEEECCCCCCCCCCCEEECCEEEEECCCC
EILFPASFLLHYSIGNAWERRDQISFARLIQGIGAGLMWDTPIGPARFTVSKAFAFLPYA
CEECCHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCEECCCCCCCCEEHHHHEEEEECC
DSNETSSLRFSDTILYFSLGHDF
CCCCCCEEEEEEEEEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]