| Definition | Chlorobium phaeobacteroides DSM 266 chromosome, complete genome. |
|---|---|
| Accession | NC_008639 |
| Length | 3,133,902 |
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The map label for this gene is 119357812
Identifier: 119357812
GI number: 119357812
Start: 2332221
End: 2332871
Strand: Reverse
Name: 119357812
Synonym: Cpha266_2020
Alternate gene names: NA
Gene position: 2332871-2332221 (Counterclockwise)
Preceding gene: 119357813
Following gene: 119357811
Centisome position: 74.44
GC content: 49.92
Gene sequence:
>651_bases ATGAAAGATCCGGTCAATACTTTTCTCACGACAGAGGCACAGCAGCAGATTGAGGAGCATATTCGCGATGCGGAAAAAAT AACTTCCGGCGAAATTGTCGTGAAGGTTGTTTCATCGAGTGATGGTTATGCGAAGGCCTGCCTTCTGGGTGGTTTTATCG TTTCGCTGTTGTTGGCAATCAGTGCGATGCTGATTATCGGCAGTCGGGATATGTGGATGTTTCTTGGTGTGTTTGCTGCC CTGTTTGTTGCGATGCATGAGCTCATCAGGCAGAGTTTTGCCTTGAAACGGTTGTTCGTTTCTTCAGCCGAAAAGAAAAT CAAGGTTGAAGAGGCCGCAATCAGCGCGTTTTACCGGCGCGGGATCGATCGTACCGTTGACCATACGGGGGTTCTTGTCT ATATCTCCATTTTTGAGCACAGGGTACGTGTTGTTGCCGACAAGGGCATTAACGAAAAGGTCGAGCAGGAGGTGTGGCAG GAGATTGTTGATATGATTGTTCGAGGAGTTCATGAGCAATCCCAGGCGGAAGCGCTCTGTCGGGCTGTTGACAGATGCGG AGCAATTCTTGCAAGCCACTTTCCCCGGAAGCAGGGAGATCGCAATGAGCTTGCTGATTCAATCATTTTCGGGCGTGCAG CAGGGCGATGA
Upstream 100 bases:
>100_bases GGCTCCGGCGGCGGTTTCGGCGGTGGCGGCGGCGGTTTTGGCGGCGGTGGCGCCAGCGGGGATTGGTAGTGCGGCGTATG AATATGATGGAAGGAATTCT
Downstream 100 bases:
>100_bases AAAAAATCTGCAAACTCGATAAAAAAGAGACGGAACGGTTTGTCCGGGAACTTCTCGAGGATGGTCGACGGCCCAGGTAT ATCTGTGAGGCTTGCGCGCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 216; Mature: 216
Protein sequence:
>216_residues MKDPVNTFLTTEAQQQIEEHIRDAEKITSGEIVVKVVSSSDGYAKACLLGGFIVSLLLAISAMLIIGSRDMWMFLGVFAA LFVAMHELIRQSFALKRLFVSSAEKKIKVEEAAISAFYRRGIDRTVDHTGVLVYISIFEHRVRVVADKGINEKVEQEVWQ EIVDMIVRGVHEQSQAEALCRAVDRCGAILASHFPRKQGDRNELADSIIFGRAAGR
Sequences:
>Translated_216_residues MKDPVNTFLTTEAQQQIEEHIRDAEKITSGEIVVKVVSSSDGYAKACLLGGFIVSLLLAISAMLIIGSRDMWMFLGVFAA LFVAMHELIRQSFALKRLFVSSAEKKIKVEEAAISAFYRRGIDRTVDHTGVLVYISIFEHRVRVVADKGINEKVEQEVWQ EIVDMIVRGVHEQSQAEALCRAVDRCGAILASHFPRKQGDRNELADSIIFGRAAGR >Mature_216_residues MKDPVNTFLTTEAQQQIEEHIRDAEKITSGEIVVKVVSSSDGYAKACLLGGFIVSLLLAISAMLIIGSRDMWMFLGVFAA LFVAMHELIRQSFALKRLFVSSAEKKIKVEEAAISAFYRRGIDRTVDHTGVLVYISIFEHRVRVVADKGINEKVEQEVWQ EIVDMIVRGVHEQSQAEALCRAVDRCGAILASHFPRKQGDRNELADSIIFGRAAGR
Specific function: Unknown
COG id: COG3762
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24079; Mature: 24079
Theoretical pI: Translated: 7.13; Mature: 7.13
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKDPVNTFLTTEAQQQIEEHIRDAEKITSGEIVVKVVSSSDGYAKACLLGGFIVSLLLAI CCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHEEEEECCCCCHHHHHHHHHHHHHHHHHH SAMLIIGSRDMWMFLGVFAALFVAMHELIRQSFALKRLFVSSAEKKIKVEEAAISAFYRR HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GIDRTVDHTGVLVYISIFEHRVRVVADKGINEKVEQEVWQEIVDMIVRGVHEQSQAEALC CCCHHHCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHH RAVDRCGAILASHFPRKQGDRNELADSIIFGRAAGR HHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCC >Mature Secondary Structure MKDPVNTFLTTEAQQQIEEHIRDAEKITSGEIVVKVVSSSDGYAKACLLGGFIVSLLLAI CCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHEEEEECCCCCHHHHHHHHHHHHHHHHHH SAMLIIGSRDMWMFLGVFAALFVAMHELIRQSFALKRLFVSSAEKKIKVEEAAISAFYRR HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GIDRTVDHTGVLVYISIFEHRVRVVADKGINEKVEQEVWQEIVDMIVRGVHEQSQAEALC CCCHHHCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHH RAVDRCGAILASHFPRKQGDRNELADSIIFGRAAGR HHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA