| Definition | Chlorobium phaeobacteroides DSM 266 chromosome, complete genome. |
|---|---|
| Accession | NC_008639 |
| Length | 3,133,902 |
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The map label for this gene is ygcG [H]
Identifier: 119357813
GI number: 119357813
Start: 2332903
End: 2333592
Strand: Reverse
Name: ygcG [H]
Synonym: Cpha266_2021
Alternate gene names: 119357813
Gene position: 2333592-2332903 (Counterclockwise)
Preceding gene: 119357814
Following gene: 119357812
Centisome position: 74.46
GC content: 55.07
Gene sequence:
>690_bases ATGCAGTTTTTGCCTCTGTACACTCTGTTTGCGCTTGACGTTCCGGTTCTCAAAGGGCGAATCAATGACTACGCCGGCAT GATTTCCGGAACGGCAAAGGCGCAACTGGAGACAAGGCTTGCGGAACTTGAAAAAACCGAGTCGACGCAGGTTGTCATTC TCACGGTTCCTTCGCTCGACGGGGAGATCCCTGAGGAGTTTTCGATGAAGGTTGTCGAGAAGTGGAAGATCGGTCAGAAA GGGTATGATAACGGGGTTCTTTTTCTGGTATCCCGTGATGATCGCAAGGTTCGCATCGAGGTTGGTTATGGTCTTGAGGG CAGACTGACCGACCTGCTTGCGGGGCGAATCGTCGATAATGACGTGGTTCCCGCATTCAAGGCGGGCCAGTACGATATCG GGTTCGTTCGCGGCGTCGAATCCATTCTTCTTGCCGTTCGGGGTGAATACAAGGCGAAACAAAAAGCCAAAACAGGGGAT GTGCCCGTTGGCACTCTCGTTTTTCTCATTATTCTTTTTTTCTATTTTTTCAGTCAGATTTCTCGCGGAGCTGGCGGCGG ACCTATGATTTATGGCGGAGGGGGCGGCGGTTTTTCAGGCGGGGGATCGTTTGGCGGCGGTGGCTCCGGCGGCGGTTTCG GCGGTGGCGGCGGCGGTTTTGGCGGCGGTGGCGCCAGCGGGGATTGGTAG
Upstream 100 bases:
>100_bases AAAGGCAGTTCCCGAGGTAAAATTCTGACATGTGAGGCAGTTTTTATCTGAAAAGAGGGGTTGCAGGGTTAACGTTGTCC TGTTTGTTTCAGCCGTCCTG
Downstream 100 bases:
>100_bases TGCGGCGTATGAATATGATGGAAGGAATTCTATGAAAGATCCGGTCAATACTTTTCTCACGACAGAGGCACAGCAGCAGA TTGAGGAGCATATTCGCGAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 229; Mature: 229
Protein sequence:
>229_residues MQFLPLYTLFALDVPVLKGRINDYAGMISGTAKAQLETRLAELEKTESTQVVILTVPSLDGEIPEEFSMKVVEKWKIGQK GYDNGVLFLVSRDDRKVRIEVGYGLEGRLTDLLAGRIVDNDVVPAFKAGQYDIGFVRGVESILLAVRGEYKAKQKAKTGD VPVGTLVFLIILFFYFFSQISRGAGGGPMIYGGGGGGFSGGGSFGGGGSGGGFGGGGGGFGGGGASGDW
Sequences:
>Translated_229_residues MQFLPLYTLFALDVPVLKGRINDYAGMISGTAKAQLETRLAELEKTESTQVVILTVPSLDGEIPEEFSMKVVEKWKIGQK GYDNGVLFLVSRDDRKVRIEVGYGLEGRLTDLLAGRIVDNDVVPAFKAGQYDIGFVRGVESILLAVRGEYKAKQKAKTGD VPVGTLVFLIILFFYFFSQISRGAGGGPMIYGGGGGGFSGGGSFGGGGSGGGFGGGGGGFGGGGASGDW >Mature_229_residues MQFLPLYTLFALDVPVLKGRINDYAGMISGTAKAQLETRLAELEKTESTQVVILTVPSLDGEIPEEFSMKVVEKWKIGQK GYDNGVLFLVSRDDRKVRIEVGYGLEGRLTDLLAGRIVDNDVVPAFKAGQYDIGFVRGVESILLAVRGEYKAKQKAKTGD VPVGTLVFLIILFFYFFSQISRGAGGGPMIYGGGGGGFSGGGSFGGGGSGGGFGGGGGGFGGGGASGDW
Specific function: Unknown
COG id: COG1512
COG function: function code R; Beta-propeller domains of methanol dehydrogenase type
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0603 family [H]
Homologues:
Organism=Escherichia coli, GI87082161, Length=193, Percent_Identity=27.979274611399, Blast_Score=98, Evalue=4e-22,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007621 [H]
Pfam domain/function: PF04536 DUF477 [H]
EC number: NA
Molecular weight: Translated: 23954; Mature: 23954
Theoretical pI: Translated: 5.38; Mature: 5.38
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQFLPLYTLFALDVPVLKGRINDYAGMISGTAKAQLETRLAELEKTESTQVVILTVPSLD CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCEEEEEEECCCC GEIPEEFSMKVVEKWKIGQKGYDNGVLFLVSRDDRKVRIEVGYGLEGRLTDLLAGRIVDN CCCCHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCEEEEEECCCCCCHHHHHHHHHHCCC DVVPAFKAGQYDIGFVRGVESILLAVRGEYKAKQKAKTGDVPVGTLVFLIILFFYFFSQI CCCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHH SRGAGGGPMIYGGGGGGFSGGGSFGGGGSGGGFGGGGGGFGGGGASGDW HCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MQFLPLYTLFALDVPVLKGRINDYAGMISGTAKAQLETRLAELEKTESTQVVILTVPSLD CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCEEEEEEECCCC GEIPEEFSMKVVEKWKIGQKGYDNGVLFLVSRDDRKVRIEVGYGLEGRLTDLLAGRIVDN CCCCHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCEEEEEECCCCCCHHHHHHHHHHCCC DVVPAFKAGQYDIGFVRGVESILLAVRGEYKAKQKAKTGDVPVGTLVFLIILFFYFFSQI CCCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHH SRGAGGGPMIYGGGGGGFSGGGSFGGGGSGGGFGGGGGGFGGGGASGDW HCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9278503 [H]