| Definition | Chlorobium phaeobacteroides DSM 266 chromosome, complete genome. |
|---|---|
| Accession | NC_008639 |
| Length | 3,133,902 |
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The map label for this gene is mrp [H]
Identifier: 119357806
GI number: 119357806
Start: 2326764
End: 2327837
Strand: Direct
Name: mrp [H]
Synonym: Cpha266_2014
Alternate gene names: 119357806
Gene position: 2326764-2327837 (Clockwise)
Preceding gene: 119357805
Following gene: 119357807
Centisome position: 74.24
GC content: 49.44
Gene sequence:
>1074_bases ATGATACAAGAAGAACAAGTGCTTGCCGCACTGAAAACCGTTGCCGAACCGGATCTTAAAAAAGATCTGGTCACCCTCGG CATGATCAAGGACATCCATATCGATGAAGCGAACAATATCGCATGCACCGTCGTACTCACCACACCGGCATGTCCAATGA AAAACCAGATCCGGCAATCCTGCATAGATGCCATCAAAACATCTCTTCCGGAAGCAGGAACCATTGAAATAACCATGAGC TCCAAGGTTACCTCATCGTGCGATCATCATGAATGCGATCATGAACGGCCGCTTAAAGAGGTTAAAAACATTATTGCCGT CGCATCAGGAAAAGGCGGAGTCGGCAAATCGACCGTTGCCGTCAATCTTGCCATAAGCCTCGCCCGGGAAGGAGCGAAAG TCGGCCTTATCGACGCAGATCTCTACGGCCCGAGCATTCCGACCATGTTCGGCATCTACGATGCCAAACCGGAAATAATT TCAAAAAAACTGATTCCACTTGAAAAATACGGCATAAAACTCATGTCGATAGGGTTTCTTGTCGAAACCGATACCGCACT GATATGGCGAGGCCCCATGGCGTCAAGTGCCATCAAGCAGTTTATCAACGATGTGGAGTGGCCTGAACTCGATTACCTGA TCTTCGATCTTCCTCCCGGTACCGGCGACATACAGTTGACGCTGGTACAGACTATTCCGGTCACAGGAGCAGTTATTGTA ACCACACCGCAGGATGTCGCGCTTGCTGACGTATCAAAGGCAGTGAACATGTTCCGCAAGATGCAGGTACCGATTCTGGG TCTGATAGAAAACATGAGCCATTATGAACTGCCTGACGGCACTAAAGACTACATTTTCGGAATGCATGGCGGAGAAAATT TTGCCAAAGCGCAAGCCATTGCATTTCTCGGATCAATTCCGATCGACAGGGAGATCAGAGAGGGCGGCGACAAGGGCAAA CCTGTTGTCCTGAGCCAACCCCGATCAGTGTCGGCGCAGGCATTTTCGCAGGCAACAAAAGAGGTCGCCCGTCAGATTTC GCTGTTCAATGCTCACATGAACGCCAAACAATAA
Upstream 100 bases:
>100_bases CGTTTCGCTGCGCTTTTTCAAAAAATGAGCCTGGCAATGCCGGCAGCTAATCTTTCCCTAACCGTTTCATGTAACATAAA AAAACAACCGCATACTCTCC
Downstream 100 bases:
>100_bases CAATAATAAATTTCAGGTTGTTTTTTTGATGACGAGGTTTAATATTAAACTACCGGATATCAGCAATCCGTCTCTCTTTC AAACATCTTAAAAGTGAATG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 357; Mature: 357
Protein sequence:
>357_residues MIQEEQVLAALKTVAEPDLKKDLVTLGMIKDIHIDEANNIACTVVLTTPACPMKNQIRQSCIDAIKTSLPEAGTIEITMS SKVTSSCDHHECDHERPLKEVKNIIAVASGKGGVGKSTVAVNLAISLAREGAKVGLIDADLYGPSIPTMFGIYDAKPEII SKKLIPLEKYGIKLMSIGFLVETDTALIWRGPMASSAIKQFINDVEWPELDYLIFDLPPGTGDIQLTLVQTIPVTGAVIV TTPQDVALADVSKAVNMFRKMQVPILGLIENMSHYELPDGTKDYIFGMHGGENFAKAQAIAFLGSIPIDREIREGGDKGK PVVLSQPRSVSAQAFSQATKEVARQISLFNAHMNAKQ
Sequences:
>Translated_357_residues MIQEEQVLAALKTVAEPDLKKDLVTLGMIKDIHIDEANNIACTVVLTTPACPMKNQIRQSCIDAIKTSLPEAGTIEITMS SKVTSSCDHHECDHERPLKEVKNIIAVASGKGGVGKSTVAVNLAISLAREGAKVGLIDADLYGPSIPTMFGIYDAKPEII SKKLIPLEKYGIKLMSIGFLVETDTALIWRGPMASSAIKQFINDVEWPELDYLIFDLPPGTGDIQLTLVQTIPVTGAVIV TTPQDVALADVSKAVNMFRKMQVPILGLIENMSHYELPDGTKDYIFGMHGGENFAKAQAIAFLGSIPIDREIREGGDKGK PVVLSQPRSVSAQAFSQATKEVARQISLFNAHMNAKQ >Mature_357_residues MIQEEQVLAALKTVAEPDLKKDLVTLGMIKDIHIDEANNIACTVVLTTPACPMKNQIRQSCIDAIKTSLPEAGTIEITMS SKVTSSCDHHECDHERPLKEVKNIIAVASGKGGVGKSTVAVNLAISLAREGAKVGLIDADLYGPSIPTMFGIYDAKPEII SKKLIPLEKYGIKLMSIGFLVETDTALIWRGPMASSAIKQFINDVEWPELDYLIFDLPPGTGDIQLTLVQTIPVTGAVIV TTPQDVALADVSKAVNMFRKMQVPILGLIENMSHYELPDGTKDYIFGMHGGENFAKAQAIAFLGSIPIDREIREGGDKGK PVVLSQPRSVSAQAFSQATKEVARQISLFNAHMNAKQ
Specific function: Not Known. [C]
COG id: COG0489
COG function: function code D; ATPases involved in chromosome partitioning
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: In the C-terminal section; belongs to the Mrp/NBP35 ATP-binding proteins family [H]
Homologues:
Organism=Homo sapiens, GI157384956, Length=256, Percent_Identity=48.828125, Blast_Score=246, Evalue=2e-65, Organism=Homo sapiens, GI6912540, Length=233, Percent_Identity=42.9184549356223, Blast_Score=187, Evalue=1e-47, Organism=Homo sapiens, GI118572611, Length=270, Percent_Identity=39.6296296296296, Blast_Score=179, Evalue=3e-45, Organism=Escherichia coli, GI87082045, Length=347, Percent_Identity=43.8040345821326, Blast_Score=259, Evalue=2e-70, Organism=Caenorhabditis elegans, GI25143050, Length=259, Percent_Identity=37.0656370656371, Blast_Score=168, Evalue=3e-42, Organism=Saccharomyces cerevisiae, GI6322188, Length=227, Percent_Identity=41.8502202643172, Blast_Score=175, Evalue=8e-45, Organism=Saccharomyces cerevisiae, GI6321347, Length=246, Percent_Identity=39.4308943089431, Blast_Score=159, Evalue=8e-40, Organism=Drosophila melanogaster, GI221511043, Length=254, Percent_Identity=39.7637795275591, Blast_Score=197, Evalue=8e-51, Organism=Drosophila melanogaster, GI24667611, Length=253, Percent_Identity=40.3162055335968, Blast_Score=184, Evalue=8e-47, Organism=Drosophila melanogaster, GI19921440, Length=266, Percent_Identity=37.218045112782, Blast_Score=143, Evalue=2e-34,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR019591 - InterPro: IPR015223 - InterPro: IPR002744 - InterPro: IPR000808 [H]
Pfam domain/function: PF01883 DUF59; PF09140 MipZ; PF10609 ParA [H]
EC number: NA
Molecular weight: Translated: 38621; Mature: 38621
Theoretical pI: Translated: 5.67; Mature: 5.67
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIQEEQVLAALKTVAEPDLKKDLVTLGMIKDIHIDEANNIACTVVLTTPACPMKNQIRQS CCCHHHHHHHHHHHCCCCHHHHHHHHHHEEEEEECCCCCEEEEEEEECCCCCHHHHHHHH CIDAIKTSLPEAGTIEITMSSKVTSSCDHHECDHERPLKEVKNIIAVASGKGGVGKSTVA HHHHHHHCCCCCCEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHEEEECCCCCCCCCEEE VNLAISLAREGAKVGLIDADLYGPSIPTMFGIYDAKPEIISKKLIPLEKYGIKLMSIGFL EEEEEEECCCCCEEEEEECCCCCCCCCCEEEEECCCHHHHHHHCCCHHHHCEEEEEEEEE VETDTALIWRGPMASSAIKQFINDVEWPELDYLIFDLPPGTGDIQLTLVQTIPVTGAVIV EECCCEEEEECCCHHHHHHHHHHCCCCCCCCEEEEECCCCCCCEEEEEEEECCCCCEEEE TTPQDVALADVSKAVNMFRKMQVPILGLIENMSHYELPDGTKDYIFGMHGGENFAKAQAI ECCCCHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCCCCCCCCCEEEEECCCCCHHHHHHH AFLGSIPIDREIREGGDKGKPVVLSQPRSVSAQAFSQATKEVARQISLFNAHMNAKQ HHHCCCCCCHHHHCCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure MIQEEQVLAALKTVAEPDLKKDLVTLGMIKDIHIDEANNIACTVVLTTPACPMKNQIRQS CCCHHHHHHHHHHHCCCCHHHHHHHHHHEEEEEECCCCCEEEEEEEECCCCCHHHHHHHH CIDAIKTSLPEAGTIEITMSSKVTSSCDHHECDHERPLKEVKNIIAVASGKGGVGKSTVA HHHHHHHCCCCCCEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHEEEECCCCCCCCCEEE VNLAISLAREGAKVGLIDADLYGPSIPTMFGIYDAKPEIISKKLIPLEKYGIKLMSIGFL EEEEEEECCCCCEEEEEECCCCCCCCCCEEEEECCCHHHHHHHCCCHHHHCEEEEEEEEE VETDTALIWRGPMASSAIKQFINDVEWPELDYLIFDLPPGTGDIQLTLVQTIPVTGAVIV EECCCEEEEECCCHHHHHHHHHHCCCCCCCCEEEEECCCCCCCEEEEEEEECCCCCEEEE TTPQDVALADVSKAVNMFRKMQVPILGLIENMSHYELPDGTKDYIFGMHGGENFAKAQAI ECCCCHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCCCCCCCCCEEEEECCCCCHHHHHHH AFLGSIPIDREIREGGDKGKPVVLSQPRSVSAQAFSQATKEVARQISLFNAHMNAKQ HHHCCCCCCHHHHCCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8590279; 8905231 [H]