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The map label for this gene is nsrR [H]

Identifier: 119357736

GI number: 119357736

Start: 2248708

End: 2249133

Strand: Reverse

Name: nsrR [H]

Synonym: Cpha266_1940

Alternate gene names: 119357736

Gene position: 2249133-2248708 (Counterclockwise)

Preceding gene: 119357738

Following gene: 119357735

Centisome position: 71.77

GC content: 46.71

Gene sequence:

>426_bases
ATGCTGCATGTTTCGCGTAAATTTGAATATGGACTTCATGCTGTTTCCTATCTTGCAACAAGGGGGGCGGGTCGAGTTGT
AACTGTCAAGGAAATGGCGGACGATATTGGCTTTTCCCAGGAATTTCTCTCAAAGGCCATGCAAAGCCTTAAAAAGGCAG
GAATCATCGCATCAGTTCAGGGCGTTAAGGGTGGTTATACTCTTGCAAAGCCGCTGTCGGGAATTACGGTTGCCGATATC
GGCGAAGCCATCGAGGGAAAGCCGCATCTTACCCGCTGTGCATCTGATCTTTACTGTGAAATAGCTTCGAAATGTACCCA
TAAACAGTATATGAATCTTTTGCAGAACAAGATCCAGGAGTTCATGGGTGCTACCACTCTGGAGACTCTTATAGAGGGTG
ATGATTCTTTGCCGCAGCTGAAGTGA

Upstream 100 bases:

>100_bases
AGCAAAAAACGTTCCCAGCAAACTTATTATAACACATCCGGATTAATAGTAAACATAGAAAGCGGGTTTTCAGTAACAGT
ATATACCTCTTTTTTGTATT

Downstream 100 bases:

>100_bases
GAGGTTTGGTTTGGTTTGGTTTATTTTATGTACATAACACTAACGAATTAGTATCCGCTTCATGACGACACAACGGCTTG
CCGATACCGACTTTGCTGAA

Product: BadM/Rrf2 family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 141; Mature: 141

Protein sequence:

>141_residues
MLHVSRKFEYGLHAVSYLATRGAGRVVTVKEMADDIGFSQEFLSKAMQSLKKAGIIASVQGVKGGYTLAKPLSGITVADI
GEAIEGKPHLTRCASDLYCEIASKCTHKQYMNLLQNKIQEFMGATTLETLIEGDDSLPQLK

Sequences:

>Translated_141_residues
MLHVSRKFEYGLHAVSYLATRGAGRVVTVKEMADDIGFSQEFLSKAMQSLKKAGIIASVQGVKGGYTLAKPLSGITVADI
GEAIEGKPHLTRCASDLYCEIASKCTHKQYMNLLQNKIQEFMGATTLETLIEGDDSLPQLK
>Mature_141_residues
MLHVSRKFEYGLHAVSYLATRGAGRVVTVKEMADDIGFSQEFLSKAMQSLKKAGIIASVQGVKGGYTLAKPLSGITVADI
GEAIEGKPHLTRCASDLYCEIASKCTHKQYMNLLQNKIQEFMGATTLETLIEGDDSLPQLK

Specific function: Nitric oxide-sensitive repressor of genes involved in protecting the cell against nitrosative stress. May require iron for activity [H]

COG id: COG1959

COG function: function code K; Predicted transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH rrf2-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1790621, Length=135, Percent_Identity=32.5925925925926, Blast_Score=72, Evalue=1e-14,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000944
- InterPro:   IPR011991 [H]

Pfam domain/function: PF02082 Rrf2 [H]

EC number: NA

Molecular weight: Translated: 15324; Mature: 15324

Theoretical pI: Translated: 8.07; Mature: 8.07

Prosite motif: PS01332 UPF0074

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
5.7 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
5.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLHVSRKFEYGLHAVSYLATRGAGRVVTVKEMADDIGFSQEFLSKAMQSLKKAGIIASVQ
CCCCCHHHHHHHHHHHHHHHCCCCCEEEHHHHHHHCCCCHHHHHHHHHHHHHCCCHHHHC
GVKGGYTLAKPLSGITVADIGEAIEGKPHLTRCASDLYCEIASKCTHKQYMNLLQNKIQE
CCCCCCHHHHCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FMGATTLETLIEGDDSLPQLK
HHCHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure
MLHVSRKFEYGLHAVSYLATRGAGRVVTVKEMADDIGFSQEFLSKAMQSLKKAGIIASVQ
CCCCCHHHHHHHHHHHHHHHCCCCCEEEHHHHHHHCCCCHHHHHHHHHHHHHCCCHHHHC
GVKGGYTLAKPLSGITVADIGEAIEGKPHLTRCASDLYCEIASKCTHKQYMNLLQNKIQE
CCCCCCHHHHCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FMGATTLETLIEGDDSLPQLK
HHCHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA