| Definition | Chlorobium phaeobacteroides DSM 266 chromosome, complete genome. |
|---|---|
| Accession | NC_008639 |
| Length | 3,133,902 |
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The map label for this gene is 119357738
Identifier: 119357738
GI number: 119357738
Start: 2250149
End: 2252875
Strand: Reverse
Name: 119357738
Synonym: Cpha266_1942
Alternate gene names: NA
Gene position: 2252875-2250149 (Counterclockwise)
Preceding gene: 119357741
Following gene: 119357736
Centisome position: 71.89
GC content: 46.86
Gene sequence:
>2727_bases GTGAAGTTTTCAAAACGAAAAATCTCTCTACTGGCGCTTTTTTGCGTTCTGTTACATATCGGCAATGTCCCATCGATACG TACTCTCGGAGCTGAGGAGCGTCCCGTTGGTCCGGTCGGCAATCACTCCGTTCCCTCAGCGGAAGCAGCAGGAATGAAAA GCGGCCCGGAAGGTCTTCAGAGTACGGTTGTGTTTGCTGCAAAAGATTCGGTGATCTACAATATCGAGCAGAAGACCATG ACGCTTTCAGGTCGGGCGCGTATCGACCAGGAGGATACGACAGTCAAGGCACCTGAAATTATCGTCAATTTCGCGACCTC TTCTCTTGATGCTTTCGGAACGACCGATTCTTTAAAGCAACTTGTTGATCCCGCTGTTTTTTCCGACAAGCAGGGAAGCT TCAATTCCGAAACACTCTCCTACAATTTCAAGACGCGCAAAGGGCAGACCTCAAATGTTACATCGAATACCCGCGAACTG ATTTTCAGCGGCGAGAACGTCACAAGGCTTGCTAATGGAGAGATGATTATCAAGAATGGTACGTTCACTACCTGCGACGA TCCTGAGCCGCACTACTGGTTCAAGGCGGGTACCATGAGAATTATTCCTGACAGCAGAATAATCGCATCTCCTCTGGTTA TGTATATCAGGCCGGAACTGTTTTCAAAACGACTTCCGGCCATCCCGATTCTTCCGCTGCCTTATATGGTTTTTCCTGCA AGGGAGGGGAGGGCTTCCGGTTTTCTGATTCCGAGACTCAGTCATGACAGTGATCGCGGTTATTATTTGTCGAATTTCGG ATATTTCTGGGCTATTAATGATTATCTGGATCTTCGGACTGAAGGCGATCTTGCTTTTAACGGGAGTTGGCGTTTGGGTG AGCGGTTCCGGTATGCAAAGCGGTACGCTTTCACTGGTACCGTGGAGGGAGAGTATGAACGGTATTTGAAAAACAAAAGA GGTGATGCGGATTATGCCGAGTATGATAGCTGGAGCCTGCGGTTAACTCACGTTCAGGATTTTGACCCTTCGACTCGTCT CGATGTGAACGTACAGTTGCAGGGAGGTGATCGCAATTATGATGTGAACACCATTAATCAGGAGACCATTATCAATGAAC AGGCCAACTCTTTCGGCTCGTTAGCCAGAACTTTCGATAATGAGAACAGTATTGCCACGTTAAGTTATGAGCGGGTTGAT GATCTGAGAAACAGTAATGTGACGCAGCTTTTTGGCGCAGCTTTCTACCAGAATCGCAGCTATCCGTTTCATTCGGGATT GTTTGCGACCGATGACGACTGGAGATCCCGACTTTCAATAACATCAGAGGCATCTCTTTGGGCAAGGCTTGAAAACCTTG ACGCCATCAGTTCCGAAACATATACCGGAGATGCAAGAGTACAGTTCGGTTACTTCAAGGAGTATTCCGAAGGATACAAG GCGTTGTTTACCCAGGATATCGACTGGCAGACAAAATATATGACATCGGGTTCTTTCGACAACGATCGCTATGGTTCAAG ACTTCGCCTTCCTTTACGGGTTCAGTCTACCCTTGCCCGTTATTTTCACGTTAATGCGGGTGTAGAGTTTAACCATTATA TGGTTGGAAATGAGCTGTTTTCCGCCTATGACGGCAGTGAATTCAAACAGGTTGATGTGGAAAATTCAACGGGATTTTCC ACATGGAATTTCTCTGTTGATGCATCGACCAGACTTTACGGAGTTGTCGATACTCCCTTGTTTGATCGTCTTTTCGGCAT GAAAGCCCTGCGCCATACCTTTATCCCGAAGATCTCCTATACATGGAGTCCTGATTTTACCGGCGAAGACTATGACTATT ACCGGACAGTTTACAATGGCACGGCATATGCCAGATACAACAGGTTTGCGAATTCGGCATACAGTGATATTGCGTCCGGA CAAAACACGATAGGTATTACGCTGAAAAATCTGTTTCATGGTAAATTCAGGGATTCGGAAACTACTGCGGGTCGCTATTC TTCCGAACGTGACCGTACGATGCAACTGCTCTCCTTTACGGCATCGACGGCATACAATTTTTCAGCTGAATCCCAGCGCT TCTCTCCTCTCGTTCTTGAGGCAACAAGCAATGCTTTTTCGCCTGATTTTTTTCTGAGTGCAGGAGCTGTTTATGATTTT TACGGTTACGACAAGGTTACCGGCGAAAGGAGTAATCGTTTTAACGCTGACGATGGCCGCGGGCTTCTTCGTTTTGTCAA CGGGTTTCTGAATATGAGTTTCAATATTCACGGTGATGGAAAGGGGGGAAGCGGTTCCGGGCCCATCAGACAGTATGAAG CTCCGATGACCCAGCAGGCGATCTTTCGTGACAGGTTCAGGGGTGATGATTTGAGCAATTTCACAACATCTTTTCCCTGG CAGCTTCGTTTGTCCCTTTATCTTGAATCCGATCGAACGGATCCGCTTCTTCCTGCACAGACTACTTCGTTGCTTAATGC TTCGGCTAATTTTGCCGTTTCAAAAAACTGGCAGGTTGGTTTTGTGACCGGTTATGATATTGGAAAGAGTGAACTGATTT TTCCAATGGTTCACGTTTATCGCGATCTTCACTGCTGGCAGATGGGCTTTCAGTGGGTTCCTTTCGGCGAATTTCAGAGC TATTCCTTTCAGATTGGTCTGAAAGCTTCCCTGTTGCAGGATATCCGGTTCAAAACCAGTGGATCAAGCAGCAGTTGGAC CAATTGA
Upstream 100 bases:
>100_bases GAAAATCATCGTCATACAGCAATAAAATAATAATATATTTTAACTTTTATCGGTTACCTGTGCACGAGAACATTATCATA CTGGAGCGGAGCAAAACGGC
Downstream 100 bases:
>100_bases CCGGGATGTTGTCAGACAAGCGTCTCAAGAATCCGGAGCAGTCGTTCGTTAAATGCTTTGTAGGCATCGTGGTGAATGCA GTGAGATGCCTGAGGTATGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 908; Mature: 908
Protein sequence:
>908_residues MKFSKRKISLLALFCVLLHIGNVPSIRTLGAEERPVGPVGNHSVPSAEAAGMKSGPEGLQSTVVFAAKDSVIYNIEQKTM TLSGRARIDQEDTTVKAPEIIVNFATSSLDAFGTTDSLKQLVDPAVFSDKQGSFNSETLSYNFKTRKGQTSNVTSNTREL IFSGENVTRLANGEMIIKNGTFTTCDDPEPHYWFKAGTMRIIPDSRIIASPLVMYIRPELFSKRLPAIPILPLPYMVFPA REGRASGFLIPRLSHDSDRGYYLSNFGYFWAINDYLDLRTEGDLAFNGSWRLGERFRYAKRYAFTGTVEGEYERYLKNKR GDADYAEYDSWSLRLTHVQDFDPSTRLDVNVQLQGGDRNYDVNTINQETIINEQANSFGSLARTFDNENSIATLSYERVD DLRNSNVTQLFGAAFYQNRSYPFHSGLFATDDDWRSRLSITSEASLWARLENLDAISSETYTGDARVQFGYFKEYSEGYK ALFTQDIDWQTKYMTSGSFDNDRYGSRLRLPLRVQSTLARYFHVNAGVEFNHYMVGNELFSAYDGSEFKQVDVENSTGFS TWNFSVDASTRLYGVVDTPLFDRLFGMKALRHTFIPKISYTWSPDFTGEDYDYYRTVYNGTAYARYNRFANSAYSDIASG QNTIGITLKNLFHGKFRDSETTAGRYSSERDRTMQLLSFTASTAYNFSAESQRFSPLVLEATSNAFSPDFFLSAGAVYDF YGYDKVTGERSNRFNADDGRGLLRFVNGFLNMSFNIHGDGKGGSGSGPIRQYEAPMTQQAIFRDRFRGDDLSNFTTSFPW QLRLSLYLESDRTDPLLPAQTTSLLNASANFAVSKNWQVGFVTGYDIGKSELIFPMVHVYRDLHCWQMGFQWVPFGEFQS YSFQIGLKASLLQDIRFKTSGSSSSWTN
Sequences:
>Translated_908_residues MKFSKRKISLLALFCVLLHIGNVPSIRTLGAEERPVGPVGNHSVPSAEAAGMKSGPEGLQSTVVFAAKDSVIYNIEQKTM TLSGRARIDQEDTTVKAPEIIVNFATSSLDAFGTTDSLKQLVDPAVFSDKQGSFNSETLSYNFKTRKGQTSNVTSNTREL IFSGENVTRLANGEMIIKNGTFTTCDDPEPHYWFKAGTMRIIPDSRIIASPLVMYIRPELFSKRLPAIPILPLPYMVFPA REGRASGFLIPRLSHDSDRGYYLSNFGYFWAINDYLDLRTEGDLAFNGSWRLGERFRYAKRYAFTGTVEGEYERYLKNKR GDADYAEYDSWSLRLTHVQDFDPSTRLDVNVQLQGGDRNYDVNTINQETIINEQANSFGSLARTFDNENSIATLSYERVD DLRNSNVTQLFGAAFYQNRSYPFHSGLFATDDDWRSRLSITSEASLWARLENLDAISSETYTGDARVQFGYFKEYSEGYK ALFTQDIDWQTKYMTSGSFDNDRYGSRLRLPLRVQSTLARYFHVNAGVEFNHYMVGNELFSAYDGSEFKQVDVENSTGFS TWNFSVDASTRLYGVVDTPLFDRLFGMKALRHTFIPKISYTWSPDFTGEDYDYYRTVYNGTAYARYNRFANSAYSDIASG QNTIGITLKNLFHGKFRDSETTAGRYSSERDRTMQLLSFTASTAYNFSAESQRFSPLVLEATSNAFSPDFFLSAGAVYDF YGYDKVTGERSNRFNADDGRGLLRFVNGFLNMSFNIHGDGKGGSGSGPIRQYEAPMTQQAIFRDRFRGDDLSNFTTSFPW QLRLSLYLESDRTDPLLPAQTTSLLNASANFAVSKNWQVGFVTGYDIGKSELIFPMVHVYRDLHCWQMGFQWVPFGEFQS YSFQIGLKASLLQDIRFKTSGSSSSWTN >Mature_908_residues MKFSKRKISLLALFCVLLHIGNVPSIRTLGAEERPVGPVGNHSVPSAEAAGMKSGPEGLQSTVVFAAKDSVIYNIEQKTM TLSGRARIDQEDTTVKAPEIIVNFATSSLDAFGTTDSLKQLVDPAVFSDKQGSFNSETLSYNFKTRKGQTSNVTSNTREL IFSGENVTRLANGEMIIKNGTFTTCDDPEPHYWFKAGTMRIIPDSRIIASPLVMYIRPELFSKRLPAIPILPLPYMVFPA REGRASGFLIPRLSHDSDRGYYLSNFGYFWAINDYLDLRTEGDLAFNGSWRLGERFRYAKRYAFTGTVEGEYERYLKNKR GDADYAEYDSWSLRLTHVQDFDPSTRLDVNVQLQGGDRNYDVNTINQETIINEQANSFGSLARTFDNENSIATLSYERVD DLRNSNVTQLFGAAFYQNRSYPFHSGLFATDDDWRSRLSITSEASLWARLENLDAISSETYTGDARVQFGYFKEYSEGYK ALFTQDIDWQTKYMTSGSFDNDRYGSRLRLPLRVQSTLARYFHVNAGVEFNHYMVGNELFSAYDGSEFKQVDVENSTGFS TWNFSVDASTRLYGVVDTPLFDRLFGMKALRHTFIPKISYTWSPDFTGEDYDYYRTVYNGTAYARYNRFANSAYSDIASG QNTIGITLKNLFHGKFRDSETTAGRYSSERDRTMQLLSFTASTAYNFSAESQRFSPLVLEATSNAFSPDFFLSAGAVYDF YGYDKVTGERSNRFNADDGRGLLRFVNGFLNMSFNIHGDGKGGSGSGPIRQYEAPMTQQAIFRDRFRGDDLSNFTTSFPW QLRLSLYLESDRTDPLLPAQTTSLLNASANFAVSKNWQVGFVTGYDIGKSELIFPMVHVYRDLHCWQMGFQWVPFGEFQS YSFQIGLKASLLQDIRFKTSGSSSSWTN
Specific function: Unknown
COG id: COG1452
COG function: function code M; Organic solvent tolerance protein OstA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 102808; Mature: 102808
Theoretical pI: Translated: 6.11; Mature: 6.11
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKFSKRKISLLALFCVLLHIGNVPSIRTLGAEERPVGPVGNHSVPSAEAAGMKSGPEGLQ CCCCHHHHHHHHHHHHHHHCCCCCCEEECCCCCCCCCCCCCCCCCCHHHCCCCCCCCCHH STVVFAAKDSVIYNIEQKTMTLSGRARIDQEDTTVKAPEIIVNFATSSLDAFGTTDSLKQ HEEEEEECCCEEEEEECCEEEECCCEECCCCCCEEECCEEEEEEHHCCCCCCCCHHHHHH LVDPAVFSDKQGSFNSETLSYNFKTRKGQTSNVTSNTRELIFSGENVTRLANGEMIIKNG HHCCHHCCCCCCCCCCCEEEEEEEECCCCCCCCCCCCEEEEECCCCEEEEECCCEEEECC TFTTCDDPEPHYWFKAGTMRIIPDSRIIASPLVMYIRPELFSKRLPAIPILPLPYMVFPA CEECCCCCCCCEEEECCEEEECCCCCHHHCCHHEEECHHHHHCCCCCCCCCCCCEEEEEC REGRASGFLIPRLSHDSDRGYYLSNFGYFWAINDYLDLRTEGDLAFNGSWRLGERFRYAK CCCCCCCEEEEECCCCCCCCEEEECCEEEEEECCEEEEEECCCEEECCCCCHHHHHHHHH RYAFTGTVEGEYERYLKNKRGDADYAEYDSWSLRLTHVQDFDPSTRLDVNVQLQGGDRNY HEEEEECCCHHHHHHHHCCCCCCCCCCCCCEEEEEEEEECCCCCCEEEEEEEEECCCCCC DVNTINQETIINEQANSFGSLARTFDNENSIATLSYERVDDLRNSNVTQLFGAAFYQNRS CCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEEHHHHHHHCCCCHHHHHHHHHHCCCC YPFHSGLFATDDDWRSRLSITSEASLWARLENLDAISSETYTGDARVQFGYFKEYSEGYK CCCCCCEEECCHHHHHHEEECCCHHHHHHHHHCHHCCCCCCCCCCEEEEHHHHHHHCCHH ALFTQDIDWQTKYMTSGSFDNDRYGSRLRLPLRVQSTLARYFHVNAGVEFNHYMVGNELF EEEECCCCCEEEEEECCCCCCCCCCCEEEEEEHHHHHHHHHEEECCCCEEEEEEECCHHH SAYDGSEFKQVDVENSTGFSTWNFSVDASTRLYGVVDTPLFDRLFGMKALRHTFIPKISY HHCCCCCCEEEECCCCCCCEEEEEEECCCCEEEEEECCHHHHHHHHHHHHHHHHCCCEEE TWSPDFTGEDYDYYRTVYNGTAYARYNRFANSAYSDIASGQNTIGITLKNLFHGKFRDSE EECCCCCCCCCHHHHHEECCEEEEHHHHHHHHHHHHHHCCCCEEEEEEEHHHCCCCCCCC TTAGRYSSERDRTMQLLSFTASTAYNFSAESQRFSPLVLEATSNAFSPDFFLSAGAVYDF CCCCCCCCHHHHHHHHHHHHHHCEECCCCCCCCCCCEEEEECCCCCCCCCEEECCCEEEE YGYDKVTGERSNRFNADDGRGLLRFVNGFLNMSFNIHGDGKGGSGSGPIRQYEAPMTQQA CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHEEEEEEEECCCCCCCCCCCCCCCCCHHHHH IFRDRFRGDDLSNFTTSFPWQLRLSLYLESDRTDPLLPAQTTSLLNASANFAVSKNWQVG HHHHHCCCCCCCCCCCCCCEEEEEEEEEECCCCCCCCCCHHHHHHCCCCCEEEECCCEEE FVTGYDIGKSELIFPMVHVYRDLHCWQMGFQWVPFGEFQSYSFQIGLKASLLQDIRFKTS EEEECCCCCCHHHHHHHHHHHHHHHHHHCCEEEECCCCCCEEEEECCHHHHHHHHHEECC GSSSSWTN CCCCCCCC >Mature Secondary Structure MKFSKRKISLLALFCVLLHIGNVPSIRTLGAEERPVGPVGNHSVPSAEAAGMKSGPEGLQ CCCCHHHHHHHHHHHHHHHCCCCCCEEECCCCCCCCCCCCCCCCCCHHHCCCCCCCCCHH STVVFAAKDSVIYNIEQKTMTLSGRARIDQEDTTVKAPEIIVNFATSSLDAFGTTDSLKQ HEEEEEECCCEEEEEECCEEEECCCEECCCCCCEEECCEEEEEEHHCCCCCCCCHHHHHH LVDPAVFSDKQGSFNSETLSYNFKTRKGQTSNVTSNTRELIFSGENVTRLANGEMIIKNG HHCCHHCCCCCCCCCCCEEEEEEEECCCCCCCCCCCCEEEEECCCCEEEEECCCEEEECC TFTTCDDPEPHYWFKAGTMRIIPDSRIIASPLVMYIRPELFSKRLPAIPILPLPYMVFPA CEECCCCCCCCEEEECCEEEECCCCCHHHCCHHEEECHHHHHCCCCCCCCCCCCEEEEEC REGRASGFLIPRLSHDSDRGYYLSNFGYFWAINDYLDLRTEGDLAFNGSWRLGERFRYAK CCCCCCCEEEEECCCCCCCCEEEECCEEEEEECCEEEEEECCCEEECCCCCHHHHHHHHH RYAFTGTVEGEYERYLKNKRGDADYAEYDSWSLRLTHVQDFDPSTRLDVNVQLQGGDRNY HEEEEECCCHHHHHHHHCCCCCCCCCCCCCEEEEEEEEECCCCCCEEEEEEEEECCCCCC DVNTINQETIINEQANSFGSLARTFDNENSIATLSYERVDDLRNSNVTQLFGAAFYQNRS CCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEEHHHHHHHCCCCHHHHHHHHHHCCCC YPFHSGLFATDDDWRSRLSITSEASLWARLENLDAISSETYTGDARVQFGYFKEYSEGYK CCCCCCEEECCHHHHHHEEECCCHHHHHHHHHCHHCCCCCCCCCCEEEEHHHHHHHCCHH ALFTQDIDWQTKYMTSGSFDNDRYGSRLRLPLRVQSTLARYFHVNAGVEFNHYMVGNELF EEEECCCCCEEEEEECCCCCCCCCCCEEEEEEHHHHHHHHHEEECCCCEEEEEEECCHHH SAYDGSEFKQVDVENSTGFSTWNFSVDASTRLYGVVDTPLFDRLFGMKALRHTFIPKISY HHCCCCCCEEEECCCCCCCEEEEEEECCCCEEEEEECCHHHHHHHHHHHHHHHHCCCEEE TWSPDFTGEDYDYYRTVYNGTAYARYNRFANSAYSDIASGQNTIGITLKNLFHGKFRDSE EECCCCCCCCCHHHHHEECCEEEEHHHHHHHHHHHHHHCCCCEEEEEEEHHHCCCCCCCC TTAGRYSSERDRTMQLLSFTASTAYNFSAESQRFSPLVLEATSNAFSPDFFLSAGAVYDF CCCCCCCCHHHHHHHHHHHHHHCEECCCCCCCCCCCEEEEECCCCCCCCCEEECCCEEEE YGYDKVTGERSNRFNADDGRGLLRFVNGFLNMSFNIHGDGKGGSGSGPIRQYEAPMTQQA CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHEEEEEEEECCCCCCCCCCCCCCCCCHHHHH IFRDRFRGDDLSNFTTSFPWQLRLSLYLESDRTDPLLPAQTTSLLNASANFAVSKNWQVG HHHHHCCCCCCCCCCCCCCEEEEEEEEEECCCCCCCCCCHHHHHHCCCCCEEEECCCEEE FVTGYDIGKSELIFPMVHVYRDLHCWQMGFQWVPFGEFQSYSFQIGLKASLLQDIRFKTS EEEECCCCCCHHHHHHHHHHHHHHHHHHCCEEEECCCCCCEEEEECCHHHHHHHHHEECC GSSSSWTN CCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA