| Definition | Chlorobium phaeobacteroides DSM 266 chromosome, complete genome. |
|---|---|
| Accession | NC_008639 |
| Length | 3,133,902 |
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The map label for this gene is aguA [H]
Identifier: 119357697
GI number: 119357697
Start: 2207738
End: 2208796
Strand: Reverse
Name: aguA [H]
Synonym: Cpha266_1901
Alternate gene names: 119357697
Gene position: 2208796-2207738 (Counterclockwise)
Preceding gene: 119357698
Following gene: 119357692
Centisome position: 70.48
GC content: 52.5
Gene sequence:
>1059_bases ATGATGGATTTCCAGTATCGCATGCCCCCGGAGTGGGCTTGTCACAAAGCCACCTGGCTTTCCTGGCCGCACAAACGTGA ATCCTGGCCAGGAAAATTTGAACCGGTTCCGGCAGTTTTTGTCGAGATTGCTTCATGGCTGAGTTCATCGGAAGAGGTAC ATATCAATGTGCTTGACGAAGCGATGGAAGTGGAGGTGCGCGAACTGTTCCGAAAGGCAGAGTACGATCATTTGCGAAGG GATCGACTTGTGCTGCACCGCATTCCAACCAATGACGCCTGGTGTCGCGACCACGGCCCGAACTATGTATTCCGCCAGGG CGGCACCGGCCTGGAGAAGGTGATTCTGAACTGGCAGTTCAATGCCTGGGGAGGAAAATATGAGCCCTGTGATGATGACA ATGCAGTGCCTGTGCGGATTGCGGAACAGCAGCATTTGCCTCTGGTTTCGATCGACATGGTGCTTGAAGGTGGAGCAATC GATGTGAACGGGAACGGTTTGCTGCTGACGACCGAAGCCTGTTTATTGAACAGGAACCGCAATCCCGGAATGAGTCGTCT TGAGATCGAAGGCGCGCTTGGCAGGTATCTCGGTATTGAAAAGGTACTCTGGCTCGGCGACGGTATAGCAGGGGACGATA CCGATGGTCATGTTGATGATATGGCGAGGTTTGTCAATGAATCAACCGTCGTGATAGCCGTTGAAGACGATGCTGCTGAT GAGAATTATGAACCGCTTCAGGATAACTATCGACTGCTCAAGAGTTTTACCGATCTCAGGGGAGAGCCTCTCAACGTGGT GAAGCTGCCCATGCCGGATCCGGTTTACTACGATGGCGAACGTCTTCCTGCAAGCTATGCGAACTTCTATATTGCCAACA GTGTTGTGCTTGTACCTCTATACCGGTGCGACGCCGACAAAAAGGCGCTTGCTGTTCTGCAGGAGTGTTTTCCCGGAAGA AAGGTTGTGGGTATCGACTGTTCAGACCTTATATGGGGATTGGGAGCCATTCACTGTATCACCCACGAAGAGCCGGATCT GCCGATACGGGAGAGGTGA
Upstream 100 bases:
>100_bases TCTCAACTATTCGCATCCTCCGGTTGTGCAGCGTATCAGACGAATAAATGAACATCCTGCCCCCGGTCATCTCAACCATT GATTGTAACCAAAGCGTGTT
Downstream 100 bases:
>100_bases GAGAGCAATAAAAAAAGCGGCCGTTTGAGAGCCGCTTTTTTTTTTGAATACCTTGTTATTGCCTTCAGGCGAGAAGCGCT TCAAGGCTTTTGCAGTTTTC
Product: peptidyl-arginine deiminase
Products: NA
Alternate protein names: Agmatine iminohydrolase [H]
Number of amino acids: Translated: 352; Mature: 352
Protein sequence:
>352_residues MMDFQYRMPPEWACHKATWLSWPHKRESWPGKFEPVPAVFVEIASWLSSSEEVHINVLDEAMEVEVRELFRKAEYDHLRR DRLVLHRIPTNDAWCRDHGPNYVFRQGGTGLEKVILNWQFNAWGGKYEPCDDDNAVPVRIAEQQHLPLVSIDMVLEGGAI DVNGNGLLLTTEACLLNRNRNPGMSRLEIEGALGRYLGIEKVLWLGDGIAGDDTDGHVDDMARFVNESTVVIAVEDDAAD ENYEPLQDNYRLLKSFTDLRGEPLNVVKLPMPDPVYYDGERLPASYANFYIANSVVLVPLYRCDADKKALAVLQECFPGR KVVGIDCSDLIWGLGAIHCITHEEPDLPIRER
Sequences:
>Translated_352_residues MMDFQYRMPPEWACHKATWLSWPHKRESWPGKFEPVPAVFVEIASWLSSSEEVHINVLDEAMEVEVRELFRKAEYDHLRR DRLVLHRIPTNDAWCRDHGPNYVFRQGGTGLEKVILNWQFNAWGGKYEPCDDDNAVPVRIAEQQHLPLVSIDMVLEGGAI DVNGNGLLLTTEACLLNRNRNPGMSRLEIEGALGRYLGIEKVLWLGDGIAGDDTDGHVDDMARFVNESTVVIAVEDDAAD ENYEPLQDNYRLLKSFTDLRGEPLNVVKLPMPDPVYYDGERLPASYANFYIANSVVLVPLYRCDADKKALAVLQECFPGR KVVGIDCSDLIWGLGAIHCITHEEPDLPIRER >Mature_352_residues MMDFQYRMPPEWACHKATWLSWPHKRESWPGKFEPVPAVFVEIASWLSSSEEVHINVLDEAMEVEVRELFRKAEYDHLRR DRLVLHRIPTNDAWCRDHGPNYVFRQGGTGLEKVILNWQFNAWGGKYEPCDDDNAVPVRIAEQQHLPLVSIDMVLEGGAI DVNGNGLLLTTEACLLNRNRNPGMSRLEIEGALGRYLGIEKVLWLGDGIAGDDTDGHVDDMARFVNESTVVIAVEDDAAD ENYEPLQDNYRLLKSFTDLRGEPLNVVKLPMPDPVYYDGERLPASYANFYIANSVVLVPLYRCDADKKALAVLQECFPGR KVVGIDCSDLIWGLGAIHCITHEEPDLPIRER
Specific function: Unknown
COG id: COG2957
COG function: function code E; Peptidylarginine deiminase and related enzymes
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the agmatine deiminase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR017754 - InterPro: IPR007466 [H]
Pfam domain/function: PF04371 PAD_porph [H]
EC number: =3.5.3.12 [H]
Molecular weight: Translated: 39959; Mature: 39959
Theoretical pI: Translated: 4.55; Mature: 4.55
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMDFQYRMPPEWACHKATWLSWPHKRESWPGKFEPVPAVFVEIASWLSSSEEVHINVLDE CCCCCCCCCCCHHCCCHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCEEEEEEHHH AMEVEVRELFRKAEYDHLRRDRLVLHRIPTNDAWCRDHGPNYVFRQGGTGLEKVILNWQF HHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCCCCCCCCCEEEECCCCCCEEEEEEEEE NAWGGKYEPCDDDNAVPVRIAEQQHLPLVSIDMVLEGGAIDVNGNGLLLTTEACLLNRNR ECCCCCCCCCCCCCCEEEEECCCCCCCEEEEEEEEECCEEEECCCEEEEEEHHHHHCCCC NPGMSRLEIEGALGRYLGIEKVLWLGDGIAGDDTDGHVDDMARFVNESTVVIAVEDDAAD CCCCCEEEECHHHHHHHCHHHEEEECCCCCCCCCCCCHHHHHHHHCCCEEEEEEECCCCC ENYEPLQDNYRLLKSFTDLRGEPLNVVKLPMPDPVYYDGERLPASYANFYIANSVVLVPL CCCCCHHHHHHHHHHHHHCCCCCCCEEECCCCCCCEECCCCCCHHHHHEEEECCEEEEEE YRCDADKKALAVLQECFPGRKVVGIDCSDLIWGLGAIHCITHEEPDLPIRER EECCCCHHHHHHHHHHCCCCEEEECCHHHHHHHHHHEEEEECCCCCCCCCCC >Mature Secondary Structure MMDFQYRMPPEWACHKATWLSWPHKRESWPGKFEPVPAVFVEIASWLSSSEEVHINVLDE CCCCCCCCCCCHHCCCHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCEEEEEEHHH AMEVEVRELFRKAEYDHLRRDRLVLHRIPTNDAWCRDHGPNYVFRQGGTGLEKVILNWQF HHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCCCCCCCCCEEEECCCCCCEEEEEEEEE NAWGGKYEPCDDDNAVPVRIAEQQHLPLVSIDMVLEGGAIDVNGNGLLLTTEACLLNRNR ECCCCCCCCCCCCCCEEEEECCCCCCCEEEEEEEEECCEEEECCCEEEEEEHHHHHCCCC NPGMSRLEIEGALGRYLGIEKVLWLGDGIAGDDTDGHVDDMARFVNESTVVIAVEDDAAD CCCCCEEEECHHHHHHHCHHHEEEECCCCCCCCCCCCHHHHHHHHCCCEEEEEEECCCCC ENYEPLQDNYRLLKSFTDLRGEPLNVVKLPMPDPVYYDGERLPASYANFYIANSVVLVPL CCCCCHHHHHHHHHHHHHCCCCCCCEEECCCCCCCEECCCCCCHHHHHEEEECCEEEEEE YRCDADKKALAVLQECFPGRKVVGIDCSDLIWGLGAIHCITHEEPDLPIRER EECCCCHHHHHHHHHHCCCCEEEECCHHHHHHHHHHEEEEECCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11832506 [H]