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The map label for this gene is degT [H]

Identifier: 119357664

GI number: 119357664

Start: 2164520

End: 2165641

Strand: Reverse

Name: degT [H]

Synonym: Cpha266_1868

Alternate gene names: 119357664

Gene position: 2165641-2164520 (Counterclockwise)

Preceding gene: 119357668

Following gene: 119357658

Centisome position: 69.1

GC content: 52.32

Gene sequence:

>1122_bases
ATGCAATTTATTGATCTGCTTACCCAGAAAGACCGGATCCGCAAAAGCCTGCTTCATCGTCTTGAAGCGATTATCGATCA
TGGTCAATATATCATGGGTCCTGAAATTTCGGAGCTCGAATCCCGTCTTGCCGAATATGTCGGAGTCAAACATTGCGTCT
CCTGTTCATCCGGAACCGATGCGCTTCTGATGCCGCTTCTTGCAAAAGGTATCGGACGGGGAGATGCGGTATTGACTACA
CCCTTTACGTTTATCGCAACAGCAGAGGTTATCACTCTTGCCGGAGCGGTTCCTGTTTTTGTTGATGTCTCTCCTGAAAC
GTTTAACATTGATCCTTCACTTGTCGAACGAGCTGTTGAAGAGGCTCATGAACACGGATTGCGTCCGAAGGCTATTATTC
CGGTCGATATTTTCGGTCTTCCCGCCGACTACAGTCGTCTTGAAGCGGTTGCGGACACGTTCGGCTTGTGGATGCTTGAA
GATGCCGCGCAGAGTTTCGGTGGCAGCTTCAGGGGAAAGCGCGCAGGCGGTTTCGGCCTCTGTGGCGCCACTTCGTTTTT
TCCCGCCAAGCCCCTTGGTTGTTATGGTGACGGGGGTGCGGTATTTACCGATGACGGGGAGCTCGACGGTCTGCTTCGTT
CGGTCAGAGTGCATGGCAGCGGAAAGGACAAGTACAGCAATGACCGGATCGGCATCAACGGCAGGCTTGATACCATGCAG
GCAGCCGTCTTGCTGGAAAAACTCACTATTTTTGATGATGAACTCGAAGAGCGTCAGCGGGTCGCCCGATCCTACAGTGA
AAAACTCAAGGATGTTCTCCGCGTTCCGTCAGTTCCGGAAGGCTACTGTTCGGCATGGGCGCAATACTCCGTGCTTGCCG
ACTCATCCGGGGAACGTCAGATCATGATGCAGGCGCTGCAGGCAGAAGGTATTCCTTCGGTTATCTACTACAAGATCCCG
CTTCACCTGCAAAAGGCCTACGCCTCACTTGGTTACAGGGAGGGGGATTTTCCGGTTTCGGAAGAGTTGAGCAGAAAGAT
TTTCTCTCTGCCGATGCACCCCTATCTGCGGGAAGAGGAGATCGAGAGGATCGCAACGGTGATCGGAACACAGAAGAAAT
AA

Upstream 100 bases:

>100_bases
GATTTGCTACAGTATAGTTCCGGTTTTCAGGCAAAGTCCTGAACAAATGTCGAACATGGCGCTTTACCTTCCGGCACTCA
GTCATCTTAATTACAACACT

Downstream 100 bases:

>100_bases
CCTTTCGACGGTTCAGCAGATATTTTTATAGCTGATCACGCTTCATCTGCAACACTCTTGCCGGGCGCTTTTATACGGAC
ATAGATTCCGGCAAGCACGA

Product: DegT/DnrJ/EryC1/StrS aminotransferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 373; Mature: 373

Protein sequence:

>373_residues
MQFIDLLTQKDRIRKSLLHRLEAIIDHGQYIMGPEISELESRLAEYVGVKHCVSCSSGTDALLMPLLAKGIGRGDAVLTT
PFTFIATAEVITLAGAVPVFVDVSPETFNIDPSLVERAVEEAHEHGLRPKAIIPVDIFGLPADYSRLEAVADTFGLWMLE
DAAQSFGGSFRGKRAGGFGLCGATSFFPAKPLGCYGDGGAVFTDDGELDGLLRSVRVHGSGKDKYSNDRIGINGRLDTMQ
AAVLLEKLTIFDDELEERQRVARSYSEKLKDVLRVPSVPEGYCSAWAQYSVLADSSGERQIMMQALQAEGIPSVIYYKIP
LHLQKAYASLGYREGDFPVSEELSRKIFSLPMHPYLREEEIERIATVIGTQKK

Sequences:

>Translated_373_residues
MQFIDLLTQKDRIRKSLLHRLEAIIDHGQYIMGPEISELESRLAEYVGVKHCVSCSSGTDALLMPLLAKGIGRGDAVLTT
PFTFIATAEVITLAGAVPVFVDVSPETFNIDPSLVERAVEEAHEHGLRPKAIIPVDIFGLPADYSRLEAVADTFGLWMLE
DAAQSFGGSFRGKRAGGFGLCGATSFFPAKPLGCYGDGGAVFTDDGELDGLLRSVRVHGSGKDKYSNDRIGINGRLDTMQ
AAVLLEKLTIFDDELEERQRVARSYSEKLKDVLRVPSVPEGYCSAWAQYSVLADSSGERQIMMQALQAEGIPSVIYYKIP
LHLQKAYASLGYREGDFPVSEELSRKIFSLPMHPYLREEEIERIATVIGTQKK
>Mature_373_residues
MQFIDLLTQKDRIRKSLLHRLEAIIDHGQYIMGPEISELESRLAEYVGVKHCVSCSSGTDALLMPLLAKGIGRGDAVLTT
PFTFIATAEVITLAGAVPVFVDVSPETFNIDPSLVERAVEEAHEHGLRPKAIIPVDIFGLPADYSRLEAVADTFGLWMLE
DAAQSFGGSFRGKRAGGFGLCGATSFFPAKPLGCYGDGGAVFTDDGELDGLLRSVRVHGSGKDKYSNDRIGINGRLDTMQ
AAVLLEKLTIFDDELEERQRVARSYSEKLKDVLRVPSVPEGYCSAWAQYSVLADSSGERQIMMQALQAEGIPSVIYYKIP
LHLQKAYASLGYREGDFPVSEELSRKIFSLPMHPYLREEEIERIATVIGTQKK

Specific function: This membrane protein may function as a sensor protein and may transfer the signal of environmental stimuli to the regulatory region of target genes to activate or repress transcription of the genes [H]

COG id: COG0399

COG function: function code M; Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis

Gene ontology:

Cell location: Cell membrane; Peripheral membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the degT/dnrJ/eryC1 family [H]

Homologues:

Organism=Escherichia coli, GI145693159, Length=373, Percent_Identity=28.9544235924933, Blast_Score=147, Evalue=1e-36,
Organism=Escherichia coli, GI2367285, Length=326, Percent_Identity=27.9141104294479, Blast_Score=123, Evalue=2e-29,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000653
- InterPro:   IPR015424
- InterPro:   IPR015421
- InterPro:   IPR015422 [H]

Pfam domain/function: PF01041 DegT_DnrJ_EryC1 [H]

EC number: NA

Molecular weight: Translated: 41009; Mature: 41009

Theoretical pI: Translated: 5.07; Mature: 5.07

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQFIDLLTQKDRIRKSLLHRLEAIIDHGQYIMGPEISELESRLAEYVGVKHCVSCSSGTD
CCHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCHHHHHHHHHHHHHHHHHHCCCCCCH
ALLMPLLAKGIGRGDAVLTTPFTFIATAEVITLAGAVPVFVDVSPETFNIDPSLVERAVE
HHHHHHHHHHCCCCCEEEECCHHHHHHHHHHHHHCCCEEEEECCCCCCCCCHHHHHHHHH
EAHEHGLRPKAIIPVDIFGLPADYSRLEAVADTFGLWMLEDAAQSFGGSFRGKRAGGFGL
HHHHCCCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEE
CGATSFFPAKPLGCYGDGGAVFTDDGELDGLLRSVRVHGSGKDKYSNDRIGINGRLDTMQ
CCCCCCCCCCCCCEECCCCEEECCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHH
AAVLLEKLTIFDDELEERQRVARSYSEKLKDVLRVPSVPEGYCSAWAQYSVLADSSGERQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHEEECCCCHHH
IMMQALQAEGIPSVIYYKIPLHLQKAYASLGYREGDFPVSEELSRKIFSLPMHPYLREEE
HHHHHHHHCCCCEEEEEECHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCCCCHHH
IERIATVIGTQKK
HHHHHHHHCCCCC
>Mature Secondary Structure
MQFIDLLTQKDRIRKSLLHRLEAIIDHGQYIMGPEISELESRLAEYVGVKHCVSCSSGTD
CCHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCHHHHHHHHHHHHHHHHHHCCCCCCH
ALLMPLLAKGIGRGDAVLTTPFTFIATAEVITLAGAVPVFVDVSPETFNIDPSLVERAVE
HHHHHHHHHHCCCCCEEEECCHHHHHHHHHHHHHCCCEEEEECCCCCCCCCHHHHHHHHH
EAHEHGLRPKAIIPVDIFGLPADYSRLEAVADTFGLWMLEDAAQSFGGSFRGKRAGGFGL
HHHHCCCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEE
CGATSFFPAKPLGCYGDGGAVFTDDGELDGLLRSVRVHGSGKDKYSNDRIGINGRLDTMQ
CCCCCCCCCCCCCEECCCCEEECCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHH
AAVLLEKLTIFDDELEERQRVARSYSEKLKDVLRVPSVPEGYCSAWAQYSVLADSSGERQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHEEECCCCHHH
IMMQALQAEGIPSVIYYKIPLHLQKAYASLGYREGDFPVSEELSRKIFSLPMHPYLREEE
HHHHHHHHCCCCEEEEEECHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCCCCHHH
IERIATVIGTQKK
HHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 2104607 [H]