| Definition | Chlorobium phaeobacteroides DSM 266 chromosome, complete genome. |
|---|---|
| Accession | NC_008639 |
| Length | 3,133,902 |
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The map label for this gene is 119357599
Identifier: 119357599
GI number: 119357599
Start: 2055373
End: 2056692
Strand: Reverse
Name: 119357599
Synonym: Cpha266_1802
Alternate gene names: NA
Gene position: 2056692-2055373 (Counterclockwise)
Preceding gene: 119357600
Following gene: 119357598
Centisome position: 65.63
GC content: 47.73
Gene sequence:
>1320_bases ATGATGAGGGCAGCGGTTATCGGCGGAGGAATTTCCGGAATTGCTTCCGCATATTATCTCATGCAGCACAATATCAGTGT TGATCTTTACGAATCGGCTGATCGTATTGGGGGCAGGATTGGCAGTGAACGGCTTGGTGAGAGGTGGCTTGATTTCGGCG GCAAAAATATCGGAAAAAATTACCGCTTGTTTCGGGATTTTGTTCTGGATTGCGGTGTTTCTGATTTTGAATATTTTGGT TTTAATACATCACAGGTCATTGGAGGCCGGGTTGTCAGCATTAACAAAGAGGGGGCCAGACTTTTCAATGCCATTCGTTT TTTCGGTTTATGCGGTTTTAGCGGCCTTCGAAAGCTCTATCCCCATGTCAGGGCAATTCTCAATGATCGTCGTCAAGGGG TTCTTGCCAGCGAGTATTTTTCTGCACTTGCTGAAGAGTATGACCATCTCTCCCTTGCTGGATACCTGAAGGAGCCCTGT TTAAGTCATATCGTAAGGCCGGTGACGGTAAGGATGAATGGGGCTGAACCTGATGAGTGTTATCCGGGGAATTTCGGCTC TAATCTCGCACTTCTGCTTGACAGTTACGAGCAGTTGCAACAGGGTATGCATGGCATGCTTGAAGCTTTTCAGCTCCCGG CAAGATCTGCTTTGTTGAGAATTCTTCCGGCACATCGGGTTACGTCTGTTAACCGTGATCATGGCAAAGGAGCAGTCATG ATCGGTTATGAGTATGAGGGCCGTTCTTTATCAGCGGAGTATGATCGGGTAGTGTCCGCTCTGCCTGCGCTTCGGTTGAG TGAACTTCTTGAAACGTTTTGTCCGGAAGTTTCAGTTCTTTTAAGGCGGATACAGTATTTTCCTGTAGCAGTTGCTATTG TGAAATATCGTCAGAATGTATTTCCGAAAGAGCAGCGCGCCATGGTTTTTGATGACTCGTTTCCGTTGAGTAATGCCGGA GCTTATGGTATCAATGATCTTGATCTGGTTCGGTATACCTTCAGCGGCAGGGCAGCAAGAGCTATGGTGTCCGATCGGTC TCAGCCTGAAGCGGTTATTACACTCGGAGAGGAGATCGCCGGACGCTATTTCACGATAAAGGATAATACGAGAGAGTCTT TTGTTTTTCGGTATCTTTCCGAGGGACTTTGTGCCTATTCGCCATACCATCATCGACTTCTTGCTGAGGTTGATCAGAAG CTTGACTTTTTTTCCGGTTTTGCCGCAACGGGTGATTATCGTCGTGGCGCATCCATAGAGGCGTGCTTCAGGGCAGCGGG GGAGTGTGTGCATAAATTACTTGACGGGGGTAAGGATTGA
Upstream 100 bases:
>100_bases GGTATGAGGAACAGAGAAAAAGGGTCGAAAAAATATGTACAAGAAGTAAAATGCAATTTGACGCAAAAATCAACCGGATT CTGCACGAGGCAGCTTCAGT
Downstream 100 bases:
>100_bases AGGTGTTGGCCTACATTCGACAGTGTGTAATTGACGGTACTCAGGTATCACGTTTCAATACGCTTGCAGCCGGGCTTCTT GGCGCTCCAGCCCATTTCTT
Product: amine oxidase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 439; Mature: 439
Protein sequence:
>439_residues MMRAAVIGGGISGIASAYYLMQHNISVDLYESADRIGGRIGSERLGERWLDFGGKNIGKNYRLFRDFVLDCGVSDFEYFG FNTSQVIGGRVVSINKEGARLFNAIRFFGLCGFSGLRKLYPHVRAILNDRRQGVLASEYFSALAEEYDHLSLAGYLKEPC LSHIVRPVTVRMNGAEPDECYPGNFGSNLALLLDSYEQLQQGMHGMLEAFQLPARSALLRILPAHRVTSVNRDHGKGAVM IGYEYEGRSLSAEYDRVVSALPALRLSELLETFCPEVSVLLRRIQYFPVAVAIVKYRQNVFPKEQRAMVFDDSFPLSNAG AYGINDLDLVRYTFSGRAARAMVSDRSQPEAVITLGEEIAGRYFTIKDNTRESFVFRYLSEGLCAYSPYHHRLLAEVDQK LDFFSGFAATGDYRRGASIEACFRAAGECVHKLLDGGKD
Sequences:
>Translated_439_residues MMRAAVIGGGISGIASAYYLMQHNISVDLYESADRIGGRIGSERLGERWLDFGGKNIGKNYRLFRDFVLDCGVSDFEYFG FNTSQVIGGRVVSINKEGARLFNAIRFFGLCGFSGLRKLYPHVRAILNDRRQGVLASEYFSALAEEYDHLSLAGYLKEPC LSHIVRPVTVRMNGAEPDECYPGNFGSNLALLLDSYEQLQQGMHGMLEAFQLPARSALLRILPAHRVTSVNRDHGKGAVM IGYEYEGRSLSAEYDRVVSALPALRLSELLETFCPEVSVLLRRIQYFPVAVAIVKYRQNVFPKEQRAMVFDDSFPLSNAG AYGINDLDLVRYTFSGRAARAMVSDRSQPEAVITLGEEIAGRYFTIKDNTRESFVFRYLSEGLCAYSPYHHRLLAEVDQK LDFFSGFAATGDYRRGASIEACFRAAGECVHKLLDGGKD >Mature_439_residues MMRAAVIGGGISGIASAYYLMQHNISVDLYESADRIGGRIGSERLGERWLDFGGKNIGKNYRLFRDFVLDCGVSDFEYFG FNTSQVIGGRVVSINKEGARLFNAIRFFGLCGFSGLRKLYPHVRAILNDRRQGVLASEYFSALAEEYDHLSLAGYLKEPC LSHIVRPVTVRMNGAEPDECYPGNFGSNLALLLDSYEQLQQGMHGMLEAFQLPARSALLRILPAHRVTSVNRDHGKGAVM IGYEYEGRSLSAEYDRVVSALPALRLSELLETFCPEVSVLLRRIQYFPVAVAIVKYRQNVFPKEQRAMVFDDSFPLSNAG AYGINDLDLVRYTFSGRAARAMVSDRSQPEAVITLGEEIAGRYFTIKDNTRESFVFRYLSEGLCAYSPYHHRLLAEVDQK LDFFSGFAATGDYRRGASIEACFRAAGECVHKLLDGGKD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 48997; Mature: 48997
Theoretical pI: Translated: 7.26; Mature: 7.26
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMRAAVIGGGISGIASAYYLMQHNISVDLYESADRIGGRIGSERLGERWLDFGGKNIGKN CCCCEEECCCHHHHHHHHHHHHCCCCEEHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCC YRLFRDFVLDCGVSDFEYFGFNTSQVIGGRVVSINKEGARLFNAIRFFGLCGFSGLRKLY HHHHHHHHHHCCCCCHHHCCCCCHHHHCCEEEEECCHHHHHHHHHHHHHHHCHHHHHHHH PHVRAILNDRRQGVLASEYFSALAEEYDHLSLAGYLKEPCLSHIVRPVTVRMNGAEPDEC HHHHHHHHHHHCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCC YPGNFGSNLALLLDSYEQLQQGMHGMLEAFQLPARSALLRILPAHRVTSVNRDHGKGAVM CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCEEEE IGYEYEGRSLSAEYDRVVSALPALRLSELLETFCPEVSVLLRRIQYFPVAVAIVKYRQNV EEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHC FPKEQRAMVFDDSFPLSNAGAYGINDLDLVRYTFSGRAARAMVSDRSQPEAVITLGEEIA CCCCCCEEEEECCCCCCCCCCCCCCCHHHEEEECCCHHHHHHHHCCCCCCEEEEECHHHC GRYFTIKDNTRESFVFRYLSEGLCAYSPYHHRLLAEVDQKLDFFSGFAATGDYRRGASIE CCEEEEECCCHHHHHHHHHHCCHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHH ACFRAAGECVHKLLDGGKD HHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MMRAAVIGGGISGIASAYYLMQHNISVDLYESADRIGGRIGSERLGERWLDFGGKNIGKN CCCCEEECCCHHHHHHHHHHHHCCCCEEHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCC YRLFRDFVLDCGVSDFEYFGFNTSQVIGGRVVSINKEGARLFNAIRFFGLCGFSGLRKLY HHHHHHHHHHCCCCCHHHCCCCCHHHHCCEEEEECCHHHHHHHHHHHHHHHCHHHHHHHH PHVRAILNDRRQGVLASEYFSALAEEYDHLSLAGYLKEPCLSHIVRPVTVRMNGAEPDEC HHHHHHHHHHHCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCC YPGNFGSNLALLLDSYEQLQQGMHGMLEAFQLPARSALLRILPAHRVTSVNRDHGKGAVM CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCEEEE IGYEYEGRSLSAEYDRVVSALPALRLSELLETFCPEVSVLLRRIQYFPVAVAIVKYRQNV EEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHC FPKEQRAMVFDDSFPLSNAGAYGINDLDLVRYTFSGRAARAMVSDRSQPEAVITLGEEIA CCCCCCEEEEECCCCCCCCCCCCCCCHHHEEEECCCHHHHHHHHCCCCCCEEEEECHHHC GRYFTIKDNTRESFVFRYLSEGLCAYSPYHHRLLAEVDQKLDFFSGFAATGDYRRGASIE CCEEEEECCCHHHHHHHHHHCCHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHH ACFRAAGECVHKLLDGGKD HHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA