| Definition | Chlorobium phaeobacteroides DSM 266 chromosome, complete genome. |
|---|---|
| Accession | NC_008639 |
| Length | 3,133,902 |
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The map label for this gene is 119357542
Identifier: 119357542
GI number: 119357542
Start: 1971731
End: 1972258
Strand: Reverse
Name: 119357542
Synonym: Cpha266_1745
Alternate gene names: NA
Gene position: 1972258-1971731 (Counterclockwise)
Preceding gene: 119357543
Following gene: 119357538
Centisome position: 62.93
GC content: 42.61
Gene sequence:
>528_bases ATGGCTGGTTTCAGCGGAATTGTTTTGAGGATGTTACAGGTTGCCGTTGGGTACGACATGAACAAACCATTGAGTTGGAG GATTTTTATCAGTTTCGGGCTTTTTATCTCCTTTATCATTCTCCTTGTTTCAGAAGTTATACTCTATATTTTGCCTTCCG GAAAACCTGCAAGCCGGGAGGCCTTTCGACTGATCGGTCTGACAAAACCGGAGTGGCAGAATCAGCATATTATTTTCGGT TTTGCTTTTTCTGTTGTTGCGTTGTTTCATCTTTCGGTTATTAACTGGCAGGGGTTTTTTTCCTGTCTGAAAGCAAAAAC ATCCGAAGGTCTCAAAAGTCCCGTAGAGTTTTTTGTTATAGTGCTTTTAACCGTTCTTTTCGGATTTTGTACTTGCTATA AAATTCAGCCTTTTTCGCCGGTTCCTGAATTTGGCAAGAGTATCTCCAAAACACTTGCTCCTCAGGGGACAAAACAGCCG GGGATGGAACAGGGAGCTGTCTGTGCAGTTAAGGGCTCAAAAGAGTAA
Upstream 100 bases:
>100_bases TGATCAGAGTGTTTTGGCAAAGAGAAAGGGAAAAGACAGTTTTCCGCTGATCCGGAGGAGGCGCAGTTCCGATGGTTATT TGATGACAGTATGAGAGTGC
Downstream 100 bases:
>100_bases ATCGGGCGGTACAGGTGTTTTTATCCGGAACGGGCAGCTTTGGGTTGTGCCCGAATTGGTTCACTGAAACTGGAGATTGC CTTTCAGGGGGAGGGCAATC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 175; Mature: 174
Protein sequence:
>175_residues MAGFSGIVLRMLQVAVGYDMNKPLSWRIFISFGLFISFIILLVSEVILYILPSGKPASREAFRLIGLTKPEWQNQHIIFG FAFSVVALFHLSVINWQGFFSCLKAKTSEGLKSPVEFFVIVLLTVLFGFCTCYKIQPFSPVPEFGKSISKTLAPQGTKQP GMEQGAVCAVKGSKE
Sequences:
>Translated_175_residues MAGFSGIVLRMLQVAVGYDMNKPLSWRIFISFGLFISFIILLVSEVILYILPSGKPASREAFRLIGLTKPEWQNQHIIFG FAFSVVALFHLSVINWQGFFSCLKAKTSEGLKSPVEFFVIVLLTVLFGFCTCYKIQPFSPVPEFGKSISKTLAPQGTKQP GMEQGAVCAVKGSKE >Mature_174_residues AGFSGIVLRMLQVAVGYDMNKPLSWRIFISFGLFISFIILLVSEVILYILPSGKPASREAFRLIGLTKPEWQNQHIIFGF AFSVVALFHLSVINWQGFFSCLKAKTSEGLKSPVEFFVIVLLTVLFGFCTCYKIQPFSPVPEFGKSISKTLAPQGTKQPG MEQGAVCAVKGSKE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19364; Mature: 19233
Theoretical pI: Translated: 9.83; Mature: 9.83
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAGFSGIVLRMLQVAVGYDMNKPLSWRIFISFGLFISFIILLVSEVILYILPSGKPASRE CCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHH AFRLIGLTKPEWQNQHIIFGFAFSVVALFHLSVINWQGFFSCLKAKTSEGLKSPVEFFVI HHHHHCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VLLTVLFGFCTCYKIQPFSPVPEFGKSISKTLAPQGTKQPGMEQGAVCAVKGSKE HHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCEEEECCCCC >Mature Secondary Structure AGFSGIVLRMLQVAVGYDMNKPLSWRIFISFGLFISFIILLVSEVILYILPSGKPASRE CCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHH AFRLIGLTKPEWQNQHIIFGFAFSVVALFHLSVINWQGFFSCLKAKTSEGLKSPVEFFVI HHHHHCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VLLTVLFGFCTCYKIQPFSPVPEFGKSISKTLAPQGTKQPGMEQGAVCAVKGSKE HHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA