Definition Chlorobium phaeobacteroides DSM 266 chromosome, complete genome.
Accession NC_008639
Length 3,133,902

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The map label for this gene is 119357541

Identifier: 119357541

GI number: 119357541

Start: 1970807

End: 1971625

Strand: Direct

Name: 119357541

Synonym: Cpha266_1744

Alternate gene names: NA

Gene position: 1970807-1971625 (Clockwise)

Preceding gene: 119357540

Following gene: 119357548

Centisome position: 62.89

GC content: 47.5

Gene sequence:

>819_bases
ATGATTCTCAAGGTTGAACACACTACCATTTTCGAGTATGATAACCCGATATACGAAACAGCCACTGAAGTCAGACTGCA
TCCGGACAACAAAGAGACCTCGCCGCAACGATGTGTAAGCTTTGCGCTCACTGTCGATCCTCCGGCTCAGATATTTGAAT
ACACCGATTTTTATGGCAACAGAGTTCACCATTTCAATATTCTGCAAAGTCATAAAAAAGTCAGAATAACAACCTCCTCT
GTCGTTGAAACCGGTACCGGACGTTCGGATTCTACCCATGACGAGTTCATTTATCTCATGGACTTTAAAGCAGAAAGCAG
ATTCGTGCATTTTGATGCGGCTATCCGTGACTTTGCAACACAGTTCACTTCCGACATCACAACCTATGACCTTGCCGCTG
CTATATGCAAAACCATCAACGACTCTTTTGTCTATGAACCAGGAGTTACCGATGTACACAGCACCAGCGCTGTTGTCATG
GCACTTGGAAGAGGCGTATGCCAGGATTTTGCCCATATCATGATCGCGGCCTGCCGCTTTCTTGGTCATCCTGCAAGATA
TGTCAGCGGTTACCTTTACGGAGGCAGCACTCCCGACGGTCGGGACGAGGCCAGCCATGCATGGTGCGAAGTATACTGCG
GCAAAGAACTGGGCTGGATCGGTTTCGACCCGACCCATAAAACGCTCTTTGTTGATGAACGATACATTAAAATAGGTTCT
GGAAGAGACTACTCCGACATCCCGCCGGTCAGAGGCACCTATAAAGGTAACGGCGAAGAAAAACTGAGCGTCTCTGTCAG
GGTAAGTTCAATGGAATAA

Upstream 100 bases:

>100_bases
AACTGGAGCCAGGCACAGCAACAGCAACAACAGTAGTAACCTTTGAAGCCGGGTAGATGCAAGAGATACAACCCCTGCAC
CCCATAGAACAAGAAAAACA

Downstream 100 bases:

>100_bases
ACTTCGATTGCCCTCCCCCTGAAAGGCAATCTCCAGTTTCAGTGAACCAATTCGGGCACAACCCAAAGCTGCCCGTTCCG
GATAAAAACACCTGTACCGC

Product: transglutaminase domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 272; Mature: 272

Protein sequence:

>272_residues
MILKVEHTTIFEYDNPIYETATEVRLHPDNKETSPQRCVSFALTVDPPAQIFEYTDFYGNRVHHFNILQSHKKVRITTSS
VVETGTGRSDSTHDEFIYLMDFKAESRFVHFDAAIRDFATQFTSDITTYDLAAAICKTINDSFVYEPGVTDVHSTSAVVM
ALGRGVCQDFAHIMIAACRFLGHPARYVSGYLYGGSTPDGRDEASHAWCEVYCGKELGWIGFDPTHKTLFVDERYIKIGS
GRDYSDIPPVRGTYKGNGEEKLSVSVRVSSME

Sequences:

>Translated_272_residues
MILKVEHTTIFEYDNPIYETATEVRLHPDNKETSPQRCVSFALTVDPPAQIFEYTDFYGNRVHHFNILQSHKKVRITTSS
VVETGTGRSDSTHDEFIYLMDFKAESRFVHFDAAIRDFATQFTSDITTYDLAAAICKTINDSFVYEPGVTDVHSTSAVVM
ALGRGVCQDFAHIMIAACRFLGHPARYVSGYLYGGSTPDGRDEASHAWCEVYCGKELGWIGFDPTHKTLFVDERYIKIGS
GRDYSDIPPVRGTYKGNGEEKLSVSVRVSSME
>Mature_272_residues
MILKVEHTTIFEYDNPIYETATEVRLHPDNKETSPQRCVSFALTVDPPAQIFEYTDFYGNRVHHFNILQSHKKVRITTSS
VVETGTGRSDSTHDEFIYLMDFKAESRFVHFDAAIRDFATQFTSDITTYDLAAAICKTINDSFVYEPGVTDVHSTSAVVM
ALGRGVCQDFAHIMIAACRFLGHPARYVSGYLYGGSTPDGRDEASHAWCEVYCGKELGWIGFDPTHKTLFVDERYIKIGS
GRDYSDIPPVRGTYKGNGEEKLSVSVRVSSME

Specific function: Unknown

COG id: COG1305

COG function: function code E; Transglutaminase-like enzymes, putative cysteine proteases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To M.tuberculosis Rv2569c [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013589
- InterPro:   IPR002931 [H]

Pfam domain/function: PF08379 Bact_transglu_N; PF01841 Transglut_core [H]

EC number: NA

Molecular weight: Translated: 30573; Mature: 30573

Theoretical pI: Translated: 5.72; Mature: 5.72

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MILKVEHTTIFEYDNPIYETATEVRLHPDNKETSPQRCVSFALTVDPPAQIFEYTDFYGN
CEEEEECCEEEECCCCHHHCCEEEEECCCCCCCCHHHEEEEEEECCCHHHHHHHHHHHCC
RVHHFNILQSHKKVRITTSSVVETGTGRSDSTHDEFIYLMDFKAESRFVHFDAAIRDFAT
EEEEEHHHHCCCEEEEEHHHHHCCCCCCCCCCCCCEEEEEEECCCCEEEEHHHHHHHHHH
QFTSDITTYDLAAAICKTINDSFVYEPGVTDVHSTSAVVMALGRGVCQDFAHIMIAACRF
HHHHCCHHHHHHHHHHHHCCCCEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
LGHPARYVSGYLYGGSTPDGRDEASHAWCEVYCGKELGWIGFDPTHKTLFVDERYIKIGS
HCCCHHHHEEEEECCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCEEEEECEEEEECC
GRDYSDIPPVRGTYKGNGEEKLSVSVRVSSME
CCCCCCCCCCCCCCCCCCCCEEEEEEEEECCC
>Mature Secondary Structure
MILKVEHTTIFEYDNPIYETATEVRLHPDNKETSPQRCVSFALTVDPPAQIFEYTDFYGN
CEEEEECCEEEECCCCHHHCCEEEEECCCCCCCCHHHEEEEEEECCCHHHHHHHHHHHCC
RVHHFNILQSHKKVRITTSSVVETGTGRSDSTHDEFIYLMDFKAESRFVHFDAAIRDFAT
EEEEEHHHHCCCEEEEEHHHHHCCCCCCCCCCCCCEEEEEEECCCCEEEEHHHHHHHHHH
QFTSDITTYDLAAAICKTINDSFVYEPGVTDVHSTSAVVMALGRGVCQDFAHIMIAACRF
HHHHCCHHHHHHHHHHHHCCCCEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
LGHPARYVSGYLYGGSTPDGRDEASHAWCEVYCGKELGWIGFDPTHKTLFVDERYIKIGS
HCCCHHHHEEEEECCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCEEEEECEEEEECC
GRDYSDIPPVRGTYKGNGEEKLSVSVRVSSME
CCCCCCCCCCCCCCCCCCCCEEEEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11234002 [H]