| Definition | Chlorobium phaeobacteroides DSM 266 chromosome, complete genome. |
|---|---|
| Accession | NC_008639 |
| Length | 3,133,902 |
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The map label for this gene is 119357541
Identifier: 119357541
GI number: 119357541
Start: 1970807
End: 1971625
Strand: Direct
Name: 119357541
Synonym: Cpha266_1744
Alternate gene names: NA
Gene position: 1970807-1971625 (Clockwise)
Preceding gene: 119357540
Following gene: 119357548
Centisome position: 62.89
GC content: 47.5
Gene sequence:
>819_bases ATGATTCTCAAGGTTGAACACACTACCATTTTCGAGTATGATAACCCGATATACGAAACAGCCACTGAAGTCAGACTGCA TCCGGACAACAAAGAGACCTCGCCGCAACGATGTGTAAGCTTTGCGCTCACTGTCGATCCTCCGGCTCAGATATTTGAAT ACACCGATTTTTATGGCAACAGAGTTCACCATTTCAATATTCTGCAAAGTCATAAAAAAGTCAGAATAACAACCTCCTCT GTCGTTGAAACCGGTACCGGACGTTCGGATTCTACCCATGACGAGTTCATTTATCTCATGGACTTTAAAGCAGAAAGCAG ATTCGTGCATTTTGATGCGGCTATCCGTGACTTTGCAACACAGTTCACTTCCGACATCACAACCTATGACCTTGCCGCTG CTATATGCAAAACCATCAACGACTCTTTTGTCTATGAACCAGGAGTTACCGATGTACACAGCACCAGCGCTGTTGTCATG GCACTTGGAAGAGGCGTATGCCAGGATTTTGCCCATATCATGATCGCGGCCTGCCGCTTTCTTGGTCATCCTGCAAGATA TGTCAGCGGTTACCTTTACGGAGGCAGCACTCCCGACGGTCGGGACGAGGCCAGCCATGCATGGTGCGAAGTATACTGCG GCAAAGAACTGGGCTGGATCGGTTTCGACCCGACCCATAAAACGCTCTTTGTTGATGAACGATACATTAAAATAGGTTCT GGAAGAGACTACTCCGACATCCCGCCGGTCAGAGGCACCTATAAAGGTAACGGCGAAGAAAAACTGAGCGTCTCTGTCAG GGTAAGTTCAATGGAATAA
Upstream 100 bases:
>100_bases AACTGGAGCCAGGCACAGCAACAGCAACAACAGTAGTAACCTTTGAAGCCGGGTAGATGCAAGAGATACAACCCCTGCAC CCCATAGAACAAGAAAAACA
Downstream 100 bases:
>100_bases ACTTCGATTGCCCTCCCCCTGAAAGGCAATCTCCAGTTTCAGTGAACCAATTCGGGCACAACCCAAAGCTGCCCGTTCCG GATAAAAACACCTGTACCGC
Product: transglutaminase domain-containing protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 272; Mature: 272
Protein sequence:
>272_residues MILKVEHTTIFEYDNPIYETATEVRLHPDNKETSPQRCVSFALTVDPPAQIFEYTDFYGNRVHHFNILQSHKKVRITTSS VVETGTGRSDSTHDEFIYLMDFKAESRFVHFDAAIRDFATQFTSDITTYDLAAAICKTINDSFVYEPGVTDVHSTSAVVM ALGRGVCQDFAHIMIAACRFLGHPARYVSGYLYGGSTPDGRDEASHAWCEVYCGKELGWIGFDPTHKTLFVDERYIKIGS GRDYSDIPPVRGTYKGNGEEKLSVSVRVSSME
Sequences:
>Translated_272_residues MILKVEHTTIFEYDNPIYETATEVRLHPDNKETSPQRCVSFALTVDPPAQIFEYTDFYGNRVHHFNILQSHKKVRITTSS VVETGTGRSDSTHDEFIYLMDFKAESRFVHFDAAIRDFATQFTSDITTYDLAAAICKTINDSFVYEPGVTDVHSTSAVVM ALGRGVCQDFAHIMIAACRFLGHPARYVSGYLYGGSTPDGRDEASHAWCEVYCGKELGWIGFDPTHKTLFVDERYIKIGS GRDYSDIPPVRGTYKGNGEEKLSVSVRVSSME >Mature_272_residues MILKVEHTTIFEYDNPIYETATEVRLHPDNKETSPQRCVSFALTVDPPAQIFEYTDFYGNRVHHFNILQSHKKVRITTSS VVETGTGRSDSTHDEFIYLMDFKAESRFVHFDAAIRDFATQFTSDITTYDLAAAICKTINDSFVYEPGVTDVHSTSAVVM ALGRGVCQDFAHIMIAACRFLGHPARYVSGYLYGGSTPDGRDEASHAWCEVYCGKELGWIGFDPTHKTLFVDERYIKIGS GRDYSDIPPVRGTYKGNGEEKLSVSVRVSSME
Specific function: Unknown
COG id: COG1305
COG function: function code E; Transglutaminase-like enzymes, putative cysteine proteases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: To M.tuberculosis Rv2569c [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013589 - InterPro: IPR002931 [H]
Pfam domain/function: PF08379 Bact_transglu_N; PF01841 Transglut_core [H]
EC number: NA
Molecular weight: Translated: 30573; Mature: 30573
Theoretical pI: Translated: 5.72; Mature: 5.72
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MILKVEHTTIFEYDNPIYETATEVRLHPDNKETSPQRCVSFALTVDPPAQIFEYTDFYGN CEEEEECCEEEECCCCHHHCCEEEEECCCCCCCCHHHEEEEEEECCCHHHHHHHHHHHCC RVHHFNILQSHKKVRITTSSVVETGTGRSDSTHDEFIYLMDFKAESRFVHFDAAIRDFAT EEEEEHHHHCCCEEEEEHHHHHCCCCCCCCCCCCCEEEEEEECCCCEEEEHHHHHHHHHH QFTSDITTYDLAAAICKTINDSFVYEPGVTDVHSTSAVVMALGRGVCQDFAHIMIAACRF HHHHCCHHHHHHHHHHHHCCCCEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH LGHPARYVSGYLYGGSTPDGRDEASHAWCEVYCGKELGWIGFDPTHKTLFVDERYIKIGS HCCCHHHHEEEEECCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCEEEEECEEEEECC GRDYSDIPPVRGTYKGNGEEKLSVSVRVSSME CCCCCCCCCCCCCCCCCCCCEEEEEEEEECCC >Mature Secondary Structure MILKVEHTTIFEYDNPIYETATEVRLHPDNKETSPQRCVSFALTVDPPAQIFEYTDFYGN CEEEEECCEEEECCCCHHHCCEEEEECCCCCCCCHHHEEEEEEECCCHHHHHHHHHHHCC RVHHFNILQSHKKVRITTSSVVETGTGRSDSTHDEFIYLMDFKAESRFVHFDAAIRDFAT EEEEEHHHHCCCEEEEEHHHHHCCCCCCCCCCCCCEEEEEEECCCCEEEEHHHHHHHHHH QFTSDITTYDLAAAICKTINDSFVYEPGVTDVHSTSAVVMALGRGVCQDFAHIMIAACRF HHHHCCHHHHHHHHHHHHCCCCEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH LGHPARYVSGYLYGGSTPDGRDEASHAWCEVYCGKELGWIGFDPTHKTLFVDERYIKIGS HCCCHHHHEEEEECCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCEEEEECEEEEECC GRDYSDIPPVRGTYKGNGEEKLSVSVRVSSME CCCCCCCCCCCCCCCCCCCCEEEEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11234002 [H]