| Definition | Chlorobium phaeobacteroides DSM 266 chromosome, complete genome. |
|---|---|
| Accession | NC_008639 |
| Length | 3,133,902 |
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The map label for this gene is 119357540
Identifier: 119357540
GI number: 119357540
Start: 1969672
End: 1970742
Strand: Direct
Name: 119357540
Synonym: Cpha266_1743
Alternate gene names: NA
Gene position: 1969672-1970742 (Clockwise)
Preceding gene: 119357539
Following gene: 119357541
Centisome position: 62.85
GC content: 47.62
Gene sequence:
>1071_bases ATGTTAAGCCGAGTCGCCGAATCACTTTTCTGGATGAGCCGTTACTTTGAACGGGCGGAGAATACCGCAAGGTTTCTCGA TGTCAATTTCAACCTGCTGCTCGATCTCAACCAGATAACTGCGGTTGAAAACCCCAATTACTGGGTAGCGCTCATTCTCG TCACCAGTGACAGGGAGAAGTTCAATGAGCTCTACTCCGAATACAATGCCCATACGGTAACCGATTATCTTGTATTCAAT AAAAGCAATCCGAACTCCATCAGTTCGTGCGTGAGCCTTGCAAGGGAAAATGCCAGAAGCATCATTGAAACCATTTCGAG TGAAATGTGGGAACAGGTCAACAACCTCTACCACTTTCTGCAGAACTCCACCCCGATGTTTGTGCATAACGACCCTTACA GCTTTTATAAAGAGATAAAAAACGCATCCCATCTTTTTCAGGGTATCACCGACAACACCTTTTCACGCAATGAGGGATGG GACTTCGTGCAGATAGGCAAGTACCTTGAGCGGGCCGACAACATTGCCAGGCTGATTGATGTGAAATATCATATGCTGCT CCCGGAATATCAGGATTCGAGCGACCCTGTCGAGGGATCGGTTGACATTATTCAATGGATGGCTCTTCTGAAAAGCTGCA GCGCCCTTGAGGCTTTTCGAAAAATTTATCTGTCAAAAATAGATCCTGACAATATCCTTCGTTTTCTTATTCTCGACAGA ACATTTCCCCGAAGCCTCAACTTCTCGGTCTGTGCCGCTGAAGATGCCTTGTCACGTCTTTCAGGAAGTACACGACACCG TTTTAACAACAATGCCGACCGCCTTATCGGCAAACTCGAAGCGGAACTCAGCTACACCACAATCGAGGAGATTTACGAGC AAGGGGTTCACCGCTACCTTGAAGATCTCGAACAACGACTGGTAAAGGTTGGAGAACAGGTTCACCTTATTTACTTTGCC TATCATACTCCCGAAATTGAGCCGCCGGATATCGATGAGGCCCTGCCCTTTACCGGAGTAGCCGGCGGAAGAGCAAACTG GAGCCAGGCACAGCAACAGCAACAACAGTAG
Upstream 100 bases:
>100_bases GTCGCGCTGAAGCGAGGCTCACTTGTTGTGAACTCATCGCAGGGCGGCGGGAGCAAGGACACCTGGGTTGTTGACGAATA AACCGAACTATCTGATCGTT
Downstream 100 bases:
>100_bases TAACCTTTGAAGCCGGGTAGATGCAAGAGATACAACCCCTGCACCCCATAGAACAAGAAAAACAATGATTCTCAAGGTTG AACACACTACCATTTTCGAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 356; Mature: 356
Protein sequence:
>356_residues MLSRVAESLFWMSRYFERAENTARFLDVNFNLLLDLNQITAVENPNYWVALILVTSDREKFNELYSEYNAHTVTDYLVFN KSNPNSISSCVSLARENARSIIETISSEMWEQVNNLYHFLQNSTPMFVHNDPYSFYKEIKNASHLFQGITDNTFSRNEGW DFVQIGKYLERADNIARLIDVKYHMLLPEYQDSSDPVEGSVDIIQWMALLKSCSALEAFRKIYLSKIDPDNILRFLILDR TFPRSLNFSVCAAEDALSRLSGSTRHRFNNNADRLIGKLEAELSYTTIEEIYEQGVHRYLEDLEQRLVKVGEQVHLIYFA YHTPEIEPPDIDEALPFTGVAGGRANWSQAQQQQQQ
Sequences:
>Translated_356_residues MLSRVAESLFWMSRYFERAENTARFLDVNFNLLLDLNQITAVENPNYWVALILVTSDREKFNELYSEYNAHTVTDYLVFN KSNPNSISSCVSLARENARSIIETISSEMWEQVNNLYHFLQNSTPMFVHNDPYSFYKEIKNASHLFQGITDNTFSRNEGW DFVQIGKYLERADNIARLIDVKYHMLLPEYQDSSDPVEGSVDIIQWMALLKSCSALEAFRKIYLSKIDPDNILRFLILDR TFPRSLNFSVCAAEDALSRLSGSTRHRFNNNADRLIGKLEAELSYTTIEEIYEQGVHRYLEDLEQRLVKVGEQVHLIYFA YHTPEIEPPDIDEALPFTGVAGGRANWSQAQQQQQQ >Mature_356_residues MLSRVAESLFWMSRYFERAENTARFLDVNFNLLLDLNQITAVENPNYWVALILVTSDREKFNELYSEYNAHTVTDYLVFN KSNPNSISSCVSLARENARSIIETISSEMWEQVNNLYHFLQNSTPMFVHNDPYSFYKEIKNASHLFQGITDNTFSRNEGW DFVQIGKYLERADNIARLIDVKYHMLLPEYQDSSDPVEGSVDIIQWMALLKSCSALEAFRKIYLSKIDPDNILRFLILDR TFPRSLNFSVCAAEDALSRLSGSTRHRFNNNADRLIGKLEAELSYTTIEEIYEQGVHRYLEDLEQRLVKVGEQVHLIYFA YHTPEIEPPDIDEALPFTGVAGGRANWSQAQQQQQQ
Specific function: Unknown
COG id: COG2307
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 41318; Mature: 41318
Theoretical pI: Translated: 4.73; Mature: 4.73
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLSRVAESLFWMSRYFERAENTARFLDVNFNLLLDLNQITAVENPNYWVALILVTSDREK CHHHHHHHHHHHHHHHHHHCCCEEEEEECEEEEEEEHHHHEECCCCEEEEEEEEECCHHH FNELYSEYNAHTVTDYLVFNKSNPNSISSCVSLARENARSIIETISSEMWEQVNNLYHFL HHHHHHHCCCCEEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QNSTPMFVHNDPYSFYKEIKNASHLFQGITDNTFSRNEGWDFVQIGKYLERADNIARLID HCCCCEEEECCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH VKYHMLLPEYQDSSDPVEGSVDIIQWMALLKSCSALEAFRKIYLSKIDPDNILRFLILDR HHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHC TFPRSLNFSVCAAEDALSRLSGSTRHRFNNNADRLIGKLEAELSYTTIEEIYEQGVHRYL CCCCCCCCEEEHHHHHHHHHCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EDLEQRLVKVGEQVHLIYFAYHTPEIEPPDIDEALPFTGVAGGRANWSQAQQQQQQ HHHHHHHHHCCCCEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCC >Mature Secondary Structure MLSRVAESLFWMSRYFERAENTARFLDVNFNLLLDLNQITAVENPNYWVALILVTSDREK CHHHHHHHHHHHHHHHHHHCCCEEEEEECEEEEEEEHHHHEECCCCEEEEEEEEECCHHH FNELYSEYNAHTVTDYLVFNKSNPNSISSCVSLARENARSIIETISSEMWEQVNNLYHFL HHHHHHHCCCCEEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QNSTPMFVHNDPYSFYKEIKNASHLFQGITDNTFSRNEGWDFVQIGKYLERADNIARLID HCCCCEEEECCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH VKYHMLLPEYQDSSDPVEGSVDIIQWMALLKSCSALEAFRKIYLSKIDPDNILRFLILDR HHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHC TFPRSLNFSVCAAEDALSRLSGSTRHRFNNNADRLIGKLEAELSYTTIEEIYEQGVHRYL CCCCCCCCEEEHHHHHHHHHCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EDLEQRLVKVGEQVHLIYFAYHTPEIEPPDIDEALPFTGVAGGRANWSQAQQQQQQ HHHHHHHHHCCCCEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA