Definition Chlorobium phaeobacteroides DSM 266 chromosome, complete genome.
Accession NC_008639
Length 3,133,902

Click here to switch to the map view.

The map label for this gene is 119357532

Identifier: 119357532

GI number: 119357532

Start: 1961102

End: 1961674

Strand: Reverse

Name: 119357532

Synonym: Cpha266_1735

Alternate gene names: NA

Gene position: 1961674-1961102 (Counterclockwise)

Preceding gene: 119357533

Following gene: 119357531

Centisome position: 62.6

GC content: 50.09

Gene sequence:

>573_bases
ATGGACAGCATCCGCAACGAGGGATCTTCGGCAAAGCGTATGTCTACAGGACGCCGGTTGCTTGTTATCGGCATTCCTGT
GCTTCTGCTTTTGCTTCTGGGAGGAATTTTTCTGACTCGTTATCTCGACGATCAGAAGCTCAAGGAGCAGCAGATCCGTT
TTGATGCCGAAAAGCAGGAACTCACCGAAACCCTGCAGAAAAGCTACATCGACGTGCAGCATCAGGATATCCGACTGTTT
GCTCTTTCTCTTGCCTGGTCGGTGCGCAGCGAGCTCATGCGGGAGAACTATGAGCAGATTGACCAGTACTTTGTTGAACT
TATCAGGCAGACCGGGTTCGGCGCAGTGATGCTTATCGACCCTCAGGGTGTTGTGAAGGTGGCTTCCGACAGGAATCTTA
AGGGAAAATCATTTTACGCCCTTTATCCCTCAGCGAGTATCAATGAAGAGCGGCTGGTTTCATACCCCTTGTCGGCAACC
AAAAGCCTTTTTGTTCTTCCCGTCATGGGATTGAACGCAAAGATCGGCACGATTGCATTTGTGTATACCTGCAGATCTTT
CGTAGCACCGTAG

Upstream 100 bases:

>100_bases
ATATCAGGATGGAAAAGACGAAGAACGGGTGCAAATGCAGGAAAAAGAAGCTTTATATCTCAAGCGTTTTGTTACGCCAT
CAACCTAAACTCCTCAATTT

Downstream 100 bases:

>100_bases
GTTTTGACGCAGGTCAGAATTATTTTTTTGAGGAGGAATCATAACCATAACCGGATATGCGCCATGCGAAAATATAACAC
ACTTCTCGTCTTTGCTTTTT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 190; Mature: 190

Protein sequence:

>190_residues
MDSIRNEGSSAKRMSTGRRLLVIGIPVLLLLLLGGIFLTRYLDDQKLKEQQIRFDAEKQELTETLQKSYIDVQHQDIRLF
ALSLAWSVRSELMRENYEQIDQYFVELIRQTGFGAVMLIDPQGVVKVASDRNLKGKSFYALYPSASINEERLVSYPLSAT
KSLFVLPVMGLNAKIGTIAFVYTCRSFVAP

Sequences:

>Translated_190_residues
MDSIRNEGSSAKRMSTGRRLLVIGIPVLLLLLLGGIFLTRYLDDQKLKEQQIRFDAEKQELTETLQKSYIDVQHQDIRLF
ALSLAWSVRSELMRENYEQIDQYFVELIRQTGFGAVMLIDPQGVVKVASDRNLKGKSFYALYPSASINEERLVSYPLSAT
KSLFVLPVMGLNAKIGTIAFVYTCRSFVAP
>Mature_190_residues
MDSIRNEGSSAKRMSTGRRLLVIGIPVLLLLLLGGIFLTRYLDDQKLKEQQIRFDAEKQELTETLQKSYIDVQHQDIRLF
ALSLAWSVRSELMRENYEQIDQYFVELIRQTGFGAVMLIDPQGVVKVASDRNLKGKSFYALYPSASINEERLVSYPLSAT
KSLFVLPVMGLNAKIGTIAFVYTCRSFVAP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21545; Mature: 21545

Theoretical pI: Translated: 9.27; Mature: 9.27

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDSIRNEGSSAKRMSTGRRLLVIGIPVLLLLLLGGIFLTRYLDDQKLKEQQIRFDAEKQE
CCCCCCCCCCHHHHHCCCEEEEHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHCCCHHHH
LTETLQKSYIDVQHQDIRLFALSLAWSVRSELMRENYEQIDQYFVELIRQTGFGAVMLID
HHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEC
PQGVVKVASDRNLKGKSFYALYPSASINEERLVSYPLSATKSLFVLPVMGLNAKIGTIAF
CCCEEEECCCCCCCCCEEEEECCCCCCCHHHHEECCCHHCCCEEEEEECCCCCCHHHHHH
VYTCRSFVAP
HHHHHHHCCC
>Mature Secondary Structure
MDSIRNEGSSAKRMSTGRRLLVIGIPVLLLLLLGGIFLTRYLDDQKLKEQQIRFDAEKQE
CCCCCCCCCCHHHHHCCCEEEEHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHCCCHHHH
LTETLQKSYIDVQHQDIRLFALSLAWSVRSELMRENYEQIDQYFVELIRQTGFGAVMLID
HHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEC
PQGVVKVASDRNLKGKSFYALYPSASINEERLVSYPLSATKSLFVLPVMGLNAKIGTIAF
CCCEEEECCCCCCCCCEEEEECCCCCCCHHHHEECCCHHCCCEEEEEECCCCCCHHHHHH
VYTCRSFVAP
HHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA