| Definition | Chlorobium phaeobacteroides DSM 266 chromosome, complete genome. |
|---|---|
| Accession | NC_008639 |
| Length | 3,133,902 |
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The map label for this gene is 119357532
Identifier: 119357532
GI number: 119357532
Start: 1961102
End: 1961674
Strand: Reverse
Name: 119357532
Synonym: Cpha266_1735
Alternate gene names: NA
Gene position: 1961674-1961102 (Counterclockwise)
Preceding gene: 119357533
Following gene: 119357531
Centisome position: 62.6
GC content: 50.09
Gene sequence:
>573_bases ATGGACAGCATCCGCAACGAGGGATCTTCGGCAAAGCGTATGTCTACAGGACGCCGGTTGCTTGTTATCGGCATTCCTGT GCTTCTGCTTTTGCTTCTGGGAGGAATTTTTCTGACTCGTTATCTCGACGATCAGAAGCTCAAGGAGCAGCAGATCCGTT TTGATGCCGAAAAGCAGGAACTCACCGAAACCCTGCAGAAAAGCTACATCGACGTGCAGCATCAGGATATCCGACTGTTT GCTCTTTCTCTTGCCTGGTCGGTGCGCAGCGAGCTCATGCGGGAGAACTATGAGCAGATTGACCAGTACTTTGTTGAACT TATCAGGCAGACCGGGTTCGGCGCAGTGATGCTTATCGACCCTCAGGGTGTTGTGAAGGTGGCTTCCGACAGGAATCTTA AGGGAAAATCATTTTACGCCCTTTATCCCTCAGCGAGTATCAATGAAGAGCGGCTGGTTTCATACCCCTTGTCGGCAACC AAAAGCCTTTTTGTTCTTCCCGTCATGGGATTGAACGCAAAGATCGGCACGATTGCATTTGTGTATACCTGCAGATCTTT CGTAGCACCGTAG
Upstream 100 bases:
>100_bases ATATCAGGATGGAAAAGACGAAGAACGGGTGCAAATGCAGGAAAAAGAAGCTTTATATCTCAAGCGTTTTGTTACGCCAT CAACCTAAACTCCTCAATTT
Downstream 100 bases:
>100_bases GTTTTGACGCAGGTCAGAATTATTTTTTTGAGGAGGAATCATAACCATAACCGGATATGCGCCATGCGAAAATATAACAC ACTTCTCGTCTTTGCTTTTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 190; Mature: 190
Protein sequence:
>190_residues MDSIRNEGSSAKRMSTGRRLLVIGIPVLLLLLLGGIFLTRYLDDQKLKEQQIRFDAEKQELTETLQKSYIDVQHQDIRLF ALSLAWSVRSELMRENYEQIDQYFVELIRQTGFGAVMLIDPQGVVKVASDRNLKGKSFYALYPSASINEERLVSYPLSAT KSLFVLPVMGLNAKIGTIAFVYTCRSFVAP
Sequences:
>Translated_190_residues MDSIRNEGSSAKRMSTGRRLLVIGIPVLLLLLLGGIFLTRYLDDQKLKEQQIRFDAEKQELTETLQKSYIDVQHQDIRLF ALSLAWSVRSELMRENYEQIDQYFVELIRQTGFGAVMLIDPQGVVKVASDRNLKGKSFYALYPSASINEERLVSYPLSAT KSLFVLPVMGLNAKIGTIAFVYTCRSFVAP >Mature_190_residues MDSIRNEGSSAKRMSTGRRLLVIGIPVLLLLLLGGIFLTRYLDDQKLKEQQIRFDAEKQELTETLQKSYIDVQHQDIRLF ALSLAWSVRSELMRENYEQIDQYFVELIRQTGFGAVMLIDPQGVVKVASDRNLKGKSFYALYPSASINEERLVSYPLSAT KSLFVLPVMGLNAKIGTIAFVYTCRSFVAP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21545; Mature: 21545
Theoretical pI: Translated: 9.27; Mature: 9.27
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDSIRNEGSSAKRMSTGRRLLVIGIPVLLLLLLGGIFLTRYLDDQKLKEQQIRFDAEKQE CCCCCCCCCCHHHHHCCCEEEEHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHCCCHHHH LTETLQKSYIDVQHQDIRLFALSLAWSVRSELMRENYEQIDQYFVELIRQTGFGAVMLID HHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEC PQGVVKVASDRNLKGKSFYALYPSASINEERLVSYPLSATKSLFVLPVMGLNAKIGTIAF CCCEEEECCCCCCCCCEEEEECCCCCCCHHHHEECCCHHCCCEEEEEECCCCCCHHHHHH VYTCRSFVAP HHHHHHHCCC >Mature Secondary Structure MDSIRNEGSSAKRMSTGRRLLVIGIPVLLLLLLGGIFLTRYLDDQKLKEQQIRFDAEKQE CCCCCCCCCCHHHHHCCCEEEEHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHCCCHHHH LTETLQKSYIDVQHQDIRLFALSLAWSVRSELMRENYEQIDQYFVELIRQTGFGAVMLID HHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEC PQGVVKVASDRNLKGKSFYALYPSASINEERLVSYPLSATKSLFVLPVMGLNAKIGTIAF CCCEEEECCCCCCCCCEEEEECCCCCCCHHHHEECCCHHCCCEEEEEECCCCCCHHHHHH VYTCRSFVAP HHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA