| Definition | Chlorobium phaeobacteroides DSM 266 chromosome, complete genome. |
|---|---|
| Accession | NC_008639 |
| Length | 3,133,902 |
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The map label for this gene is 119357531
Identifier: 119357531
GI number: 119357531
Start: 1960217
End: 1961038
Strand: Reverse
Name: 119357531
Synonym: Cpha266_1734
Alternate gene names: NA
Gene position: 1961038-1960217 (Counterclockwise)
Preceding gene: 119357532
Following gene: 119357530
Centisome position: 62.57
GC content: 45.38
Gene sequence:
>822_bases ATGCGAAAATATAACACACTTCTCGTCTTTGCTTTTTTTGCCGTTCTGACTCTCGGAGCTTGTGGTGACAAAAAGCAAAA TCCTGATGCGACATCCCCAGGAATCAGCACTCCATCGCTTCCTTTTTCCCAGCCTTTTGAAGGCGTGCTTACCATGAAGA CGATCATTCCGGAAGCAGGTTCAACAGAGATGAAACTCTTTTTCGCAAAGGAGGGCGTTCGTACCGAGACCTCCTCAAAC ATCAAAGGGATGGCCTCCGGGATGCATATGGTCATGCTTTCGCCATCCAAAACGCCGAACCTTCTCTATCTTCTCAATGA GAGCGAAAAAACCTATACGGTGATCGATACTGATGAGATGAAAAAAGCTGCTGAGAAGATTAAGGACCCTGATGGCAAAG ATGACGCAATCATTGAAAATCTTGGAAAGGAAACCATCAACGGGTACTCATGCACCCATGTTCGTATAACGAGCGGCAAG AATGTGATGGAGATGTGGGTATCGAAAGATATTCTTGATTATTTTACCTATGCGAGAATGCAGAGCGCAAATGAGAAGAA TCTGCCGAGATTCGCACAACGGATGAAAGATGCCGGCGTAGAGGGGTTCCCGGTAAAAATCCGGCAGAATCAATCCGGCA TTGTTACCGAGCTGGTCAATGTTGACAAGAAGAATCTCGATGCATCATTGTTTGAAGTGCCTCCTGGATATGTGAAAACG GAATCGCCGATGATGAACAATGTTATGCCGGGTAAACAGAGCAAGGAGATGGAGGCTCTGGTAAAGAAAATGCAGGAGAG AATGAAAAAAGAGAATCAGTAA
Upstream 100 bases:
>100_bases ATTTGTGTATACCTGCAGATCTTTCGTAGCACCGTAGGTTTTGACGCAGGTCAGAATTATTTTTTTGAGGAGGAATCATA ACCATAACCGGATATGCGCC
Downstream 100 bases:
>100_bases CCGCTTGTGTTCTGATTTGGCTTTTTCATGGTTTGAACAGGGCCAGGTTCTGTTCAGGGTTTTATTTCTTTTTTAACGGT TCGGCTTGTTTTATTAATTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 273; Mature: 273
Protein sequence:
>273_residues MRKYNTLLVFAFFAVLTLGACGDKKQNPDATSPGISTPSLPFSQPFEGVLTMKTIIPEAGSTEMKLFFAKEGVRTETSSN IKGMASGMHMVMLSPSKTPNLLYLLNESEKTYTVIDTDEMKKAAEKIKDPDGKDDAIIENLGKETINGYSCTHVRITSGK NVMEMWVSKDILDYFTYARMQSANEKNLPRFAQRMKDAGVEGFPVKIRQNQSGIVTELVNVDKKNLDASLFEVPPGYVKT ESPMMNNVMPGKQSKEMEALVKKMQERMKKENQ
Sequences:
>Translated_273_residues MRKYNTLLVFAFFAVLTLGACGDKKQNPDATSPGISTPSLPFSQPFEGVLTMKTIIPEAGSTEMKLFFAKEGVRTETSSN IKGMASGMHMVMLSPSKTPNLLYLLNESEKTYTVIDTDEMKKAAEKIKDPDGKDDAIIENLGKETINGYSCTHVRITSGK NVMEMWVSKDILDYFTYARMQSANEKNLPRFAQRMKDAGVEGFPVKIRQNQSGIVTELVNVDKKNLDASLFEVPPGYVKT ESPMMNNVMPGKQSKEMEALVKKMQERMKKENQ >Mature_273_residues MRKYNTLLVFAFFAVLTLGACGDKKQNPDATSPGISTPSLPFSQPFEGVLTMKTIIPEAGSTEMKLFFAKEGVRTETSSN IKGMASGMHMVMLSPSKTPNLLYLLNESEKTYTVIDTDEMKKAAEKIKDPDGKDDAIIENLGKETINGYSCTHVRITSGK NVMEMWVSKDILDYFTYARMQSANEKNLPRFAQRMKDAGVEGFPVKIRQNQSGIVTELVNVDKKNLDASLFEVPPGYVKT ESPMMNNVMPGKQSKEMEALVKKMQERMKKENQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30506; Mature: 30506
Theoretical pI: Translated: 8.94; Mature: 8.94
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 6.6 %Met (Translated Protein) 7.3 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 6.6 %Met (Mature Protein) 7.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRKYNTLLVFAFFAVLTLGACGDKKQNPDATSPGISTPSLPFSQPFEGVLTMKTIIPEAG CCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCC STEMKLFFAKEGVRTETSSNIKGMASGMHMVMLSPSKTPNLLYLLNESEKTYTVIDTDEM CCCEEEEEECCCCCCCCCCCCHHHHCCEEEEEECCCCCCCEEEEEECCCCEEEEECHHHH KKAAEKIKDPDGKDDAIIENLGKETINGYSCTHVRITSGKNVMEMWVSKDILDYFTYARM HHHHHHHCCCCCCCHHHHHHHHHHHCCCEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHH QSANEKNLPRFAQRMKDAGVEGFPVKIRQNQSGIVTELVNVDKKNLDASLFEVPPGYVKT HCCCCCCCHHHHHHHHHCCCCCCEEEEECCCCCHHHHHHHCCHHCCCCCEEECCCCCEEC ESPMMNNVMPGKQSKEMEALVKKMQERMKKENQ CCCHHHCCCCCCCHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MRKYNTLLVFAFFAVLTLGACGDKKQNPDATSPGISTPSLPFSQPFEGVLTMKTIIPEAG CCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCC STEMKLFFAKEGVRTETSSNIKGMASGMHMVMLSPSKTPNLLYLLNESEKTYTVIDTDEM CCCEEEEEECCCCCCCCCCCCHHHHCCEEEEEECCCCCCCEEEEEECCCCEEEEECHHHH KKAAEKIKDPDGKDDAIIENLGKETINGYSCTHVRITSGKNVMEMWVSKDILDYFTYARM HHHHHHHCCCCCCCHHHHHHHHHHHCCCEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHH QSANEKNLPRFAQRMKDAGVEGFPVKIRQNQSGIVTELVNVDKKNLDASLFEVPPGYVKT HCCCCCCCHHHHHHHHHCCCCCCEEEEECCCCCHHHHHHHCCHHCCCCCEEECCCCCEEC ESPMMNNVMPGKQSKEMEALVKKMQERMKKENQ CCCHHHCCCCCCCHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA