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The map label for this gene is csmI [H]

Identifier: 119357530

GI number: 119357530

Start: 1959010

End: 1960077

Strand: Reverse

Name: csmI [H]

Synonym: Cpha266_1733

Alternate gene names: 119357530

Gene position: 1960077-1959010 (Counterclockwise)

Preceding gene: 119357531

Following gene: 119357529

Centisome position: 62.54

GC content: 51.87

Gene sequence:

>1068_bases
ATGAATCTTTTTATTAACGATTTGCCTTGTGAGGCAGCGATCGGTCAGACGCTTGGCAAAGCTGCGAGGGTTAACCACAG
TCATGTCGGCTATGTCTGCGCGGGTCAGGGAATCTGTCAGGCCTGCTATGTTACCGTTCAGGAGGGCGCCGACTCTCTTT
CACCGCTTTCGGATGTTGAAAAAGCATTTTTGTCTGATCGTCAGATTGCAAAAGGCGGGCGTCTTGCATGTCAGGCTGTC
ATTGAACGGGACGGCGTGGTCAAGGTGCTTTCACGTCCTGAAGAGGTAAGGCGAATGCTGTTCAATAATCCCGTCGCACT
GTTTGGCTATGGTGCTGAGATGGGCAGGGATACCGCTTCACGTATTCTGCCGGGTATTGCAAATCTTGCGGGACGTGCAG
TCCGGGGTGAGCTTGGCGGAAAAAGCGCGTTGCCCGATTTTCTGGAGGGAGTTGGCGCTGCTTTTCAGCTTGCCGTAACA
ACGGCCCCGAAGATGATTCCTTTCGGCGATCAGTTTCGAACGCTTCTCTCTGCGTTTCCAATACCCGTGCCATTTTTTAA
TCAGCCTGCTATTGTTGCAAAAACCGGGCTTGTTTCACTGCCGGTGAGTGTTTCGGGAACCCCGCTTCCGATAGCGCTAC
CGGTTCCTGATGCAATAATCGAGAAACCTGATCTGGCAGCACTTGAAGGCATTTCCGAAGCGCAGGCCATCAAGCTGATT
AAAGCCGGAGTCAAAACTCTTGATATGCTTCTTCTCAAAGGTGCAGACAGGAAAGGACGGAAATTACTTGCCGACGAGAC
CGCTCTGAGTGAAGAGGAGGTTCTTACCCTGGTCAACAGGGCTGATCTTGCACGCATTAAGGGGATTGGCGTGCACTACT
CTGAACTCCTTGAAGCTGCAGGGGTTGATACGGTACCTGAGCTTGCCCAGCGCAATGCCGCAAACCTTATGCTGAAACTG
CAGGATGTTAACAAATCCAAAAAACTTGTCCTGCAGCTTCCGACGGCAGAACAGGTTAAAGATTGGGTTCAGCAGGCCAA
AACCCTGCGCCGGATGGTTACCTACTGA

Upstream 100 bases:

>100_bases
GGGCCAGGTTCTGTTCAGGGTTTTATTTCTTTTTTAACGGTTCGGCTTGTTTTATTAATTTCGACTGGTTTCTTGAAGAA
ACTACCAAATAAATACATTT

Downstream 100 bases:

>100_bases
CATGGATCAATCCATGCTGCTCTGGATTCTGGCCGGCGCACTTATTGTCGCCGGCTTTGCCGGACTTGTTATACCTGCGC
TTCCGGGCATTGTTCTGGTG

Product: ferredoxin

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 355; Mature: 355

Protein sequence:

>355_residues
MNLFINDLPCEAAIGQTLGKAARVNHSHVGYVCAGQGICQACYVTVQEGADSLSPLSDVEKAFLSDRQIAKGGRLACQAV
IERDGVVKVLSRPEEVRRMLFNNPVALFGYGAEMGRDTASRILPGIANLAGRAVRGELGGKSALPDFLEGVGAAFQLAVT
TAPKMIPFGDQFRTLLSAFPIPVPFFNQPAIVAKTGLVSLPVSVSGTPLPIALPVPDAIIEKPDLAALEGISEAQAIKLI
KAGVKTLDMLLLKGADRKGRKLLADETALSEEEVLTLVNRADLARIKGIGVHYSELLEAAGVDTVPELAQRNAANLMLKL
QDVNKSKKLVLQLPTAEQVKDWVQQAKTLRRMVTY

Sequences:

>Translated_355_residues
MNLFINDLPCEAAIGQTLGKAARVNHSHVGYVCAGQGICQACYVTVQEGADSLSPLSDVEKAFLSDRQIAKGGRLACQAV
IERDGVVKVLSRPEEVRRMLFNNPVALFGYGAEMGRDTASRILPGIANLAGRAVRGELGGKSALPDFLEGVGAAFQLAVT
TAPKMIPFGDQFRTLLSAFPIPVPFFNQPAIVAKTGLVSLPVSVSGTPLPIALPVPDAIIEKPDLAALEGISEAQAIKLI
KAGVKTLDMLLLKGADRKGRKLLADETALSEEEVLTLVNRADLARIKGIGVHYSELLEAAGVDTVPELAQRNAANLMLKL
QDVNKSKKLVLQLPTAEQVKDWVQQAKTLRRMVTY
>Mature_355_residues
MNLFINDLPCEAAIGQTLGKAARVNHSHVGYVCAGQGICQACYVTVQEGADSLSPLSDVEKAFLSDRQIAKGGRLACQAV
IERDGVVKVLSRPEEVRRMLFNNPVALFGYGAEMGRDTASRILPGIANLAGRAVRGELGGKSALPDFLEGVGAAFQLAVT
TAPKMIPFGDQFRTLLSAFPIPVPFFNQPAIVAKTGLVSLPVSVSGTPLPIALPVPDAIIEKPDLAALEGISEAQAIKLI
KAGVKTLDMLLLKGADRKGRKLLADETALSEEEVLTLVNRADLARIKGIGVHYSELLEAAGVDTVPELAQRNAANLMLKL
QDVNKSKKLVLQLPTAEQVKDWVQQAKTLRRMVTY

Specific function: Could play a direct role in the oxidation or reduction of the quenching species formed in the chlorosome [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Chlorosome [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 2Fe-2S ferredoxin-type domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012675
- InterPro:   IPR001041 [H]

Pfam domain/function: PF00111 Fer2 [H]

EC number: NA

Molecular weight: Translated: 37924; Mature: 37924

Theoretical pI: Translated: 8.47; Mature: 8.47

Prosite motif: PS00687 ALDEHYDE_DEHYDR_GLU ; PS51085 2FE2S_FER_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNLFINDLPCEAAIGQTLGKAARVNHSHVGYVCAGQGICQACYVTVQEGADSLSPLSDVE
CCCCCCCCCCHHHHHHHHHHHHHCCCCCCCEEECCCHHHHHHHHHHHHCCCCCCHHHHHH
KAFLSDRQIAKGGRLACQAVIERDGVVKVLSRPEEVRRMLFNNPVALFGYGAEMGRDTAS
HHHHCCHHHCCCCHHHHHHHHHCCCHHHHHCCHHHHHHHHHCCCEEEEECCHHHCHHHHH
RILPGIANLAGRAVRGELGGKSALPDFLEGVGAAFQLAVTTAPKMIPFGDQFRTLLSAFP
HHHHHHHHHHCHHHHCCCCCCCCCHHHHHHHCHHEEEEEECCCCCCCCCHHHHHHHHHCC
IPVPFFNQPAIVAKTGLVSLPVSVSGTPLPIALPVPDAIIEKPDLAALEGISEAQAIKLI
CCCCCCCCCCCEEECCCEEECEECCCCCEEEEECCCHHHHCCCCHHHHHCCHHHHHHHHH
KAGVKTLDMLLLKGADRKGRKLLADETALSEEEVLTLVNRADLARIKGIGVHYSELLEAA
HHHHHHHHHHHHCCCCCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHC
GVDTVPELAQRNAANLMLKLQDVNKSKKLVLQLPTAEQVKDWVQQAKTLRRMVTY
CCCCHHHHHHCCHHHEEEEEECCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MNLFINDLPCEAAIGQTLGKAARVNHSHVGYVCAGQGICQACYVTVQEGADSLSPLSDVE
CCCCCCCCCCHHHHHHHHHHHHHCCCCCCCEEECCCHHHHHHHHHHHHCCCCCCHHHHHH
KAFLSDRQIAKGGRLACQAVIERDGVVKVLSRPEEVRRMLFNNPVALFGYGAEMGRDTAS
HHHHCCHHHCCCCHHHHHHHHHCCCHHHHHCCHHHHHHHHHCCCEEEEECCHHHCHHHHH
RILPGIANLAGRAVRGELGGKSALPDFLEGVGAAFQLAVTTAPKMIPFGDQFRTLLSAFP
HHHHHHHHHHCHHHHCCCCCCCCCHHHHHHHCHHEEEEEECCCCCCCCCHHHHHHHHHCC
IPVPFFNQPAIVAKTGLVSLPVSVSGTPLPIALPVPDAIIEKPDLAALEGISEAQAIKLI
CCCCCCCCCCCEEECCCEEECEECCCCCEEEEECCCHHHHCCCCHHHHHCCHHHHHHHHH
KAGVKTLDMLLLKGADRKGRKLLADETALSEEEVLTLVNRADLARIKGIGVHYSELLEAA
HHHHHHHHHHHHCCCCCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHC
GVDTVPELAQRNAANLMLKLQDVNKSKKLVLQLPTAEQVKDWVQQAKTLRRMVTY
CCCCHHHHHHCCHHHEEEEEECCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11148041; 12093901 [H]