| Definition | Chlorobium phaeobacteroides DSM 266 chromosome, complete genome. |
|---|---|
| Accession | NC_008639 |
| Length | 3,133,902 |
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The map label for this gene is dinD [H]
Identifier: 119357509
GI number: 119357509
Start: 1938953
End: 1939807
Strand: Reverse
Name: dinD [H]
Synonym: Cpha266_1711
Alternate gene names: 119357509
Gene position: 1939807-1938953 (Counterclockwise)
Preceding gene: 119357510
Following gene: 119357508
Centisome position: 61.9
GC content: 51.11
Gene sequence:
>855_bases ATGAAAACTGAACTGATCCGGACACTCACGACTACTTTTGAGGCTCATGCCCGGAAGGTTGAAGGAGGAGTAGAATATTG GCTGGCCCGTGATCTTCAGTATTTGCTTGGCTATAGCAAGTGGGACAACTTTCTGAACGTAGTTTCCAAGGCTAAAACTG CTTGCGAAATTTCCGGCCACAATGTGGCCGACCATTTTGCTGACGTCGGGAAAATGGTCGATCTTGGTTCTGGCAGCCAG CGCGAGGTGGACGATATCATGCTCACACGCTATGCTTGCTATCTCATTGCCCAGAATGGCGATTCACGAAAGCAGGAAAT CGCTTTTGCCCAGACCTATTTTGCCATTCAGACACGTCGCGCCGAAGTTATTGAGCAGCGTTTGCTGGAGGCCGAAAGAG TATCTGCCCGCAAAAAGCTGAGTGCAACGGAAAAGGAGCTGTCGGGTGTGATCTTCGAGCAGACAGGAAGTACGGAGAAT TTTGCTCTCATTCGGAGCAAGGGCGATCAGGCACTTTTTGGCAAAAGCACACAGGCGATGAAAGCAGAGTGGAATGTACC GGATAAACGCCCGCTGGCAGATTTTGCACCAACCATCATCCTGAAAGCCAAAGACTTTGCCACGGAGATCACCATTTTCA ATGCACGCGAACACGGGATGAAAAGTGAAGGGCAAATTTCCACGGAACACATCACCAACAACAAGGCGGTACGGAAAACT CTACTCGAACGGGGCATCCGTCCGGAATCGCTGCCGCCAGCCGAAGATGTAAAAAAGGTCGAGCGTCGTCTGGCCTCCGA GGAAAAGAAGTCGTTGAAGAATCCTGACGGCTTGAGTGAGCCAGCGGAGGAGTGA
Upstream 100 bases:
>100_bases GCGTTCAGTTGTAAAGGATTTCTTTACAACTGCCGATGGAGAGGCCTGCTGCACGAAGATGTAATAACGATTGTCTGAAA CATCTCAAATTCTTTAAGCA
Downstream 100 bases:
>100_bases TGGGAATGAAAGTCGAAAATTTGCAATGCGCTGAGGCGCGACTTGGTCAGAACAATTGCTTGCAACTTGAGGAGGATGCG GGATGTGGGATGATGTATGA
Product: DNA-damage-inducible protein D
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 284; Mature: 284
Protein sequence:
>284_residues MKTELIRTLTTTFEAHARKVEGGVEYWLARDLQYLLGYSKWDNFLNVVSKAKTACEISGHNVADHFADVGKMVDLGSGSQ REVDDIMLTRYACYLIAQNGDSRKQEIAFAQTYFAIQTRRAEVIEQRLLEAERVSARKKLSATEKELSGVIFEQTGSTEN FALIRSKGDQALFGKSTQAMKAEWNVPDKRPLADFAPTIILKAKDFATEITIFNAREHGMKSEGQISTEHITNNKAVRKT LLERGIRPESLPPAEDVKKVERRLASEEKKSLKNPDGLSEPAEE
Sequences:
>Translated_284_residues MKTELIRTLTTTFEAHARKVEGGVEYWLARDLQYLLGYSKWDNFLNVVSKAKTACEISGHNVADHFADVGKMVDLGSGSQ REVDDIMLTRYACYLIAQNGDSRKQEIAFAQTYFAIQTRRAEVIEQRLLEAERVSARKKLSATEKELSGVIFEQTGSTEN FALIRSKGDQALFGKSTQAMKAEWNVPDKRPLADFAPTIILKAKDFATEITIFNAREHGMKSEGQISTEHITNNKAVRKT LLERGIRPESLPPAEDVKKVERRLASEEKKSLKNPDGLSEPAEE >Mature_284_residues MKTELIRTLTTTFEAHARKVEGGVEYWLARDLQYLLGYSKWDNFLNVVSKAKTACEISGHNVADHFADVGKMVDLGSGSQ REVDDIMLTRYACYLIAQNGDSRKQEIAFAQTYFAIQTRRAEVIEQRLLEAERVSARKKLSATEKELSGVIFEQTGSTEN FALIRSKGDQALFGKSTQAMKAEWNVPDKRPLADFAPTIILKAKDFATEITIFNAREHGMKSEGQISTEHITNNKAVRKT LLERGIRPESLPPAEDVKKVERRLASEEKKSLKNPDGLSEPAEE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI87082303, Length=258, Percent_Identity=38.3720930232558, Blast_Score=154, Evalue=5e-39,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31926; Mature: 31926
Theoretical pI: Translated: 7.62; Mature: 7.62
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKTELIRTLTTTFEAHARKVEGGVEYWLARDLQYLLGYSKWDNFLNVVSKAKTACEISGH CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC NVADHFADVGKMVDLGSGSQREVDDIMLTRYACYLIAQNGDSRKQEIAFAQTYFAIQTRR CHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHEEEECCCCCHHHHHHHHHHHHHHHHHH AEVIEQRLLEAERVSARKKLSATEKELSGVIFEQTGSTENFALIRSKGDQALFGKSTQAM HHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCCCCEEEEECCCCCCHHCCCCHHH KAEWNVPDKRPLADFAPTIILKAKDFATEITIFNAREHGMKSEGQISTEHITNNKAVRKT CCCCCCCCCCCCHHHCCEEEEEECHHEEEEEEEECHHCCCCCCCCEEHHHHCCCHHHHHH LLERGIRPESLPPAEDVKKVERRLASEEKKSLKNPDGLSEPAEE HHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC >Mature Secondary Structure MKTELIRTLTTTFEAHARKVEGGVEYWLARDLQYLLGYSKWDNFLNVVSKAKTACEISGH CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC NVADHFADVGKMVDLGSGSQREVDDIMLTRYACYLIAQNGDSRKQEIAFAQTYFAIQTRR CHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHEEEECCCCCHHHHHHHHHHHHHHHHHH AEVIEQRLLEAERVSARKKLSATEKELSGVIFEQTGSTENFALIRSKGDQALFGKSTQAM HHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCCCCEEEEECCCCCCHHCCCCHHH KAEWNVPDKRPLADFAPTIILKAKDFATEITIFNAREHGMKSEGQISTEHITNNKAVRKT CCCCCCCCCCCCHHHCCEEEEEECHHEEEEEEEECHHCCCCCCCCEEHHHHCCCHHHHHH LLERGIRPESLPPAEDVKKVERRLASEEKKSLKNPDGLSEPAEE HHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 2664418; 7686882; 9278503; 2158980; 1925027; 8195095; 8057377; 8002613 [H]