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The map label for this gene is nisX1 [H]

Identifier: 119357496

GI number: 119357496

Start: 1922038

End: 1923021

Strand: Reverse

Name: nisX1 [H]

Synonym: Cpha266_1698

Alternate gene names: 119357496

Gene position: 1923021-1922038 (Counterclockwise)

Preceding gene: 119357497

Following gene: 119357494

Centisome position: 61.36

GC content: 53.76

Gene sequence:

>984_bases
ATGCTGATAGAAGAAGCACATGAAAACGGAGCGCGCTACAGCAAGGCCTGTGAGGTTGTCGGGATCTCTCTTCGTACCCT
GCAGCGCTGGAAACGCGGTTGCCTGAACGACCGGCGAAAAGGCTCAAAGAAAACCGTTCCGAGAAAAGTGTCACAGGAAG
CCAGGGAAGAGATCGTTGCAGTCTGCAATGAACCGCGGTTCCGGGATCAGACGCCGTATGAAATCGTCCCGCAACTCCTG
ACCGAAGGCCGGTATCTGGCCTCTGAAAGCACGATCTACCGTATCCTGAGAGATCGTGACCTGTTGCACCATCGGAGCGA
ACTGCGCGTGCGCCATTGCCACTCGAAGCCCCCGGAACGAAGGGCGACAGGACCGAATCAGGTGTACACGTGGGACATCA
CCTACATGGGCCGTACGATAAGAGGCCTCTTCTATTACGCTTACGTCGTGACGGACATCTTTGACAAATCCATCGTTGGT
TGGGCAGTGCATGCAGAAGAGAGTGAAGCACACAGCCGGGCACTGTTTGAGCGGATCCTGAAAGGACGTCGTATAGGCCT
GAAAGCGCTTCATGCCGATAACGGCCATCCGATGAAAGGGGTTTCGCTGATGGCGCTCCTGATAGACCTGAAAGTAGCAG
TATCGCACAGCAGGCCACGGACCAGTAACGACAACCCGTACATCGAATCGCTGTTCAAGACGATGAAGTACCATGTGACC
TATCCGAAAGCCTTTGAAACACTGGAGGATGCAAGGCAATGGATGGGAGAGTTCGTGAACTGGTACAACACCGAACACAA
GCATTCTTCGATTGGGTATGTAACACCGCATCAGATGCGGTACGGTCAGGCAAAAGCAATCTTTGAGCAGCGAAACCGGG
CATTACAGCTTGCTCGGGAGATACATCCCGAACGTTGGGGATCAAGACCGGCAAGAGAGTGGAACATTAACCGGGAAGTG
GTGCTGAACCCGGACAAAAAGTGA

Upstream 100 bases:

>100_bases
CAGAAGCGGCGGCTCTCCTCATTTTAAAAAAAAAGTTAGATGCCCTTACGAGGGAGCACGAGGACGACTGATCCTTGAGG
ATCACAAGACTGAAGTGATT

Downstream 100 bases:

>100_bases
ATATATTTTTTCAACAAAATGCGACATCTCTATTGACATAAAGCGCTATCCCTGAATTTCGGAGCGGTGAGTTATGAAAA
AAACTTGAGAGGGGCTCGTC

Product: integrase catalytic subunit

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 327; Mature: 327

Protein sequence:

>327_residues
MLIEEAHENGARYSKACEVVGISLRTLQRWKRGCLNDRRKGSKKTVPRKVSQEAREEIVAVCNEPRFRDQTPYEIVPQLL
TEGRYLASESTIYRILRDRDLLHHRSELRVRHCHSKPPERRATGPNQVYTWDITYMGRTIRGLFYYAYVVTDIFDKSIVG
WAVHAEESEAHSRALFERILKGRRIGLKALHADNGHPMKGVSLMALLIDLKVAVSHSRPRTSNDNPYIESLFKTMKYHVT
YPKAFETLEDARQWMGEFVNWYNTEHKHSSIGYVTPHQMRYGQAKAIFEQRNRALQLAREIHPERWGSRPAREWNINREV
VLNPDKK

Sequences:

>Translated_327_residues
MLIEEAHENGARYSKACEVVGISLRTLQRWKRGCLNDRRKGSKKTVPRKVSQEAREEIVAVCNEPRFRDQTPYEIVPQLL
TEGRYLASESTIYRILRDRDLLHHRSELRVRHCHSKPPERRATGPNQVYTWDITYMGRTIRGLFYYAYVVTDIFDKSIVG
WAVHAEESEAHSRALFERILKGRRIGLKALHADNGHPMKGVSLMALLIDLKVAVSHSRPRTSNDNPYIESLFKTMKYHVT
YPKAFETLEDARQWMGEFVNWYNTEHKHSSIGYVTPHQMRYGQAKAIFEQRNRALQLAREIHPERWGSRPAREWNINREV
VLNPDKK
>Mature_327_residues
MLIEEAHENGARYSKACEVVGISLRTLQRWKRGCLNDRRKGSKKTVPRKVSQEAREEIVAVCNEPRFRDQTPYEIVPQLL
TEGRYLASESTIYRILRDRDLLHHRSELRVRHCHSKPPERRATGPNQVYTWDITYMGRTIRGLFYYAYVVTDIFDKSIVG
WAVHAEESEAHSRALFERILKGRRIGLKALHADNGHPMKGVSLMALLIDLKVAVSHSRPRTSNDNPYIESLFKTMKYHVT
YPKAFETLEDARQWMGEFVNWYNTEHKHSSIGYVTPHQMRYGQAKAIFEQRNRALQLAREIHPERWGSRPAREWNINREV
VLNPDKK

Specific function: Involved in the transposition of the insertion sequence [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 integrase catalytic domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001584
- InterPro:   IPR012337 [H]

Pfam domain/function: PF00665 rve [H]

EC number: NA

Molecular weight: Translated: 38306; Mature: 38306

Theoretical pI: Translated: 10.12; Mature: 10.12

Prosite motif: PS50994 INTEGRASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLIEEAHENGARYSKACEVVGISLRTLQRWKRGCLNDRRKGSKKTVPRKVSQEAREEIVA
CCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCCHHHHHHHHHHHHHH
VCNEPRFRDQTPYEIVPQLLTEGRYLASESTIYRILRDRDLLHHRSELRVRHCHSKPPER
HHCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
RATGPNQVYTWDITYMGRTIRGLFYYAYVVTDIFDKSIVGWAVHAEESEAHSRALFERIL
CCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCHHHHHHHHHHHHHH
KGRRIGLKALHADNGHPMKGVSLMALLIDLKVAVSHSRPRTSNDNPYIESLFKTMKYHVT
CCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCC
YPKAFETLEDARQWMGEFVNWYNTEHKHSSIGYVTPHQMRYGQAKAIFEQRNRALQLARE
CHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
IHPERWGSRPAREWNINREVVLNPDKK
HCHHHHCCCCCCCCCCCCEEEECCCCC
>Mature Secondary Structure
MLIEEAHENGARYSKACEVVGISLRTLQRWKRGCLNDRRKGSKKTVPRKVSQEAREEIVA
CCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCCHHHHHHHHHHHHHH
VCNEPRFRDQTPYEIVPQLLTEGRYLASESTIYRILRDRDLLHHRSELRVRHCHSKPPER
HHCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
RATGPNQVYTWDITYMGRTIRGLFYYAYVVTDIFDKSIVGWAVHAEESEAHSRALFERIL
CCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCHHHHHHHHHHHHHH
KGRRIGLKALHADNGHPMKGVSLMALLIDLKVAVSHSRPRTSNDNPYIESLFKTMKYHVT
CCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCC
YPKAFETLEDARQWMGEFVNWYNTEHKHSSIGYVTPHQMRYGQAKAIFEQRNRALQLARE
CHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
IHPERWGSRPAREWNINREVVLNPDKK
HCHHHHCCCCCCCCCCCCEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1482189; 11337471; 1482192 [H]