| Definition | Chlorobium phaeobacteroides DSM 266 chromosome, complete genome. |
|---|---|
| Accession | NC_008639 |
| Length | 3,133,902 |
Click here to switch to the map view.
The map label for this gene is 119357497
Identifier: 119357497
GI number: 119357497
Start: 1923051
End: 1923536
Strand: Reverse
Name: 119357497
Synonym: Cpha266_1699
Alternate gene names: NA
Gene position: 1923536-1923051 (Counterclockwise)
Preceding gene: 119357502
Following gene: 119357496
Centisome position: 61.38
GC content: 50.21
Gene sequence:
>486_bases ATGGGTTACTCGCATGCAGTAAGGCAGAGTGTACTGAAGAAAGTGCTGCCGCCAGAAGGCCGGAGCATCAGTGAAGTGAG TCGGGAAACCGGCGTCAACGAGCAAACAATCCGGAATTGGATCAAACGAAGTAAAACGGGTATCTTGGCAGATGGCAATC AAGACAGCTGTCCCCGTTTCCTGACACCCAAAGAGAAGTACCAGTTGGTCGTTGAGGCTGCCGGTATCGATGATGAGCAA CTGGGCGGATTTCTCAGGGAACGCGGGCTGCATTCAGAACACATCACCATCTGGGACCAGGAGCTTCGGGACATGATCGA CAACAAAAACGACAAGCAAGACAAAGAGAATAAAGCACTGAAAAAAAAGGTCAAAGAGCTTGAGAAGGAGCTGCAGCGCA AGGAAAAAGCACTTGCAGAAGCGGCGGCTCTCCTCATTTTAAAAAAAAAGTTAGATGCCCTTACGAGGGAGCACGAGGAC GACTGA
Upstream 100 bases:
>100_bases GTATTGCGCTTTTTGCCTGTTTCGGAGTGGTTATTTTGATCGTTTGAGCTCTATCCCCTATGTGTTAATATAGATGGCGT GTCCTAAACGGAGGCGATCT
Downstream 100 bases:
>100_bases TCCTTGAGGATCACAAGACTGAAGTGATTATGCTGATAGAAGAAGCACATGAAAACGGAGCGCGCTACAGCAAGGCCTGT GAGGTTGTCGGGATCTCTCT
Product: transposase IS3/IS911 family protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 161; Mature: 160
Protein sequence:
>161_residues MGYSHAVRQSVLKKVLPPEGRSISEVSRETGVNEQTIRNWIKRSKTGILADGNQDSCPRFLTPKEKYQLVVEAAGIDDEQ LGGFLRERGLHSEHITIWDQELRDMIDNKNDKQDKENKALKKKVKELEKELQRKEKALAEAAALLILKKKLDALTREHED D
Sequences:
>Translated_161_residues MGYSHAVRQSVLKKVLPPEGRSISEVSRETGVNEQTIRNWIKRSKTGILADGNQDSCPRFLTPKEKYQLVVEAAGIDDEQ LGGFLRERGLHSEHITIWDQELRDMIDNKNDKQDKENKALKKKVKELEKELQRKEKALAEAAALLILKKKLDALTREHED D >Mature_160_residues GYSHAVRQSVLKKVLPPEGRSISEVSRETGVNEQTIRNWIKRSKTGILADGNQDSCPRFLTPKEKYQLVVEAAGIDDEQL GGFLRERGLHSEHITIWDQELRDMIDNKNDKQDKENKALKKKVKELEKELQRKEKALAEAAALLILKKKLDALTREHEDD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18457; Mature: 18326
Theoretical pI: Translated: 8.47; Mature: 8.47
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGYSHAVRQSVLKKVLPPEGRSISEVSRETGVNEQTIRNWIKRSKTGILADGNQDSCPRF CCHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCHHHHHHHHHHHCCCCEECCCCCCCCCC LTPKEKYQLVVEAAGIDDEQLGGFLRERGLHSEHITIWDQELRDMIDNKNDKQDKENKAL CCCHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHH KKKVKELEKELQRKEKALAEAAALLILKKKLDALTREHEDD HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure GYSHAVRQSVLKKVLPPEGRSISEVSRETGVNEQTIRNWIKRSKTGILADGNQDSCPRF CHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCHHHHHHHHHHHCCCCEECCCCCCCCCC LTPKEKYQLVVEAAGIDDEQLGGFLRERGLHSEHITIWDQELRDMIDNKNDKQDKENKAL CCCHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHH KKKVKELEKELQRKEKALAEAAALLILKKKLDALTREHEDD HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA