| Definition | Chlorobium phaeobacteroides DSM 266 chromosome, complete genome. |
|---|---|
| Accession | NC_008639 |
| Length | 3,133,902 |
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The map label for this gene is 119357427
Identifier: 119357427
GI number: 119357427
Start: 1847846
End: 1848664
Strand: Reverse
Name: 119357427
Synonym: Cpha266_1626
Alternate gene names: NA
Gene position: 1848664-1847846 (Counterclockwise)
Preceding gene: 119357428
Following gene: 119357426
Centisome position: 58.99
GC content: 37.85
Gene sequence:
>819_bases ATGAGCGAATATGAGTCAAGCCCCGAGTCAAACCAATCTGCATTCCCAGACCCATTTCACCCTGTCGGCATATGGAGTTC ATTGTATAATTGCCTGGAGGAATACAGGAGTTTTTTGCAAGCCGCTGCAAATGCAGGAACTTCCGCGAAGACAGTGAGTG GGCGTATTTACGTTCATTCAAGCAAGTTAGAAGAACATATCTCATGCTGCGACATGTTGCTTGAACGGCAATATGAAACA GCCCCACTAGATAATGATATTTATGATCTTAAAAAAGAAATACAAGATACCATCAAGAGAATCATACCAGCAAAAACTGT AATCAGCTATGCGGTTTCCTATACATTCAATACTCTACAACAAAGATTATCATCAAATAAAATAGGAGTAATAGAATTAG AGAACACGATAAAAGCCATGACATTCTTACTCGCACTTGATGAGCAACAAAAAGTTATAGAATCCTTTCTTTATATACGT GAACTAAAGAAATGGCTTAAACAGGAATGGTTTGAGGAGATAATTAGCGTAAAAAAAGAAACGGATACAAAATATCGTGG CAAATTTTCAGCCTATAAACCGCTAACTGAAGTAATAGAAGCTGTGAACATCCACAAATCTGGCGAAAAATGGCCAGACA TAGTTTTCTTTGAGATCGAAACACCTCTTTTTAAAATTGCTGGATCAACCCCTAAAGCCGCAAAACTATTTTGTGACTAC TACGAAATACCCGGAAAAGAGAACGCTCTGCATGAAGCATACAAGAGGTATAAAAAGAGAAAGAAAAAAAAGAACGATAC AAGGTCGATAACGGGTTGA
Upstream 100 bases:
>100_bases ATTAGAGAAACAGGTTTTGCTGTATATGATGTAAAATCCACATGGTTTTTAATACATTTATATTCAACTTGTTTCCATAT AACCATTTAAGTTGTCCTCC
Downstream 100 bases:
>100_bases AAAAAGGGTGAAAAAGATATGCATGTTATTTTAAAACAATATCTTAGCGTTGTATAGTAGTGCCATGCATTGCAAATTAT AGTTGTTGAGTGATTCTTAC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 272; Mature: 271
Protein sequence:
>272_residues MSEYESSPESNQSAFPDPFHPVGIWSSLYNCLEEYRSFLQAAANAGTSAKTVSGRIYVHSSKLEEHISCCDMLLERQYET APLDNDIYDLKKEIQDTIKRIIPAKTVISYAVSYTFNTLQQRLSSNKIGVIELENTIKAMTFLLALDEQQKVIESFLYIR ELKKWLKQEWFEEIISVKKETDTKYRGKFSAYKPLTEVIEAVNIHKSGEKWPDIVFFEIETPLFKIAGSTPKAAKLFCDY YEIPGKENALHEAYKRYKKRKKKKNDTRSITG
Sequences:
>Translated_272_residues MSEYESSPESNQSAFPDPFHPVGIWSSLYNCLEEYRSFLQAAANAGTSAKTVSGRIYVHSSKLEEHISCCDMLLERQYET APLDNDIYDLKKEIQDTIKRIIPAKTVISYAVSYTFNTLQQRLSSNKIGVIELENTIKAMTFLLALDEQQKVIESFLYIR ELKKWLKQEWFEEIISVKKETDTKYRGKFSAYKPLTEVIEAVNIHKSGEKWPDIVFFEIETPLFKIAGSTPKAAKLFCDY YEIPGKENALHEAYKRYKKRKKKKNDTRSITG >Mature_271_residues SEYESSPESNQSAFPDPFHPVGIWSSLYNCLEEYRSFLQAAANAGTSAKTVSGRIYVHSSKLEEHISCCDMLLERQYETA PLDNDIYDLKKEIQDTIKRIIPAKTVISYAVSYTFNTLQQRLSSNKIGVIELENTIKAMTFLLALDEQQKVIESFLYIRE LKKWLKQEWFEEIISVKKETDTKYRGKFSAYKPLTEVIEAVNIHKSGEKWPDIVFFEIETPLFKIAGSTPKAAKLFCDYY EIPGKENALHEAYKRYKKRKKKKNDTRSITG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31473; Mature: 31342
Theoretical pI: Translated: 8.26; Mature: 8.26
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSEYESSPESNQSAFPDPFHPVGIWSSLYNCLEEYRSFLQAAANAGTSAKTVSGRIYVHS CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCEEEEEH SKLEEHISCCDMLLERQYETAPLDNDIYDLKKEIQDTIKRIIPAKTVISYAVSYTFNTLQ HHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QRLSSNKIGVIELENTIKAMTFLLALDEQQKVIESFLYIRELKKWLKQEWFEEIISVKKE HHHCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TDTKYRGKFSAYKPLTEVIEAVNIHKSGEKWPDIVFFEIETPLFKIAGSTPKAAKLFCDY CCHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCHHHHCCCCCHHHHHHHHH YEIPGKENALHEAYKRYKKRKKKKNDTRSITG HHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure SEYESSPESNQSAFPDPFHPVGIWSSLYNCLEEYRSFLQAAANAGTSAKTVSGRIYVHS CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCEEEEEH SKLEEHISCCDMLLERQYETAPLDNDIYDLKKEIQDTIKRIIPAKTVISYAVSYTFNTLQ HHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QRLSSNKIGVIELENTIKAMTFLLALDEQQKVIESFLYIRELKKWLKQEWFEEIISVKKE HHHCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TDTKYRGKFSAYKPLTEVIEAVNIHKSGEKWPDIVFFEIETPLFKIAGSTPKAAKLFCDY CCHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCHHHHCCCCCHHHHHHHHH YEIPGKENALHEAYKRYKKRKKKKNDTRSITG HHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA