| Definition | Chlorobium phaeobacteroides DSM 266 chromosome, complete genome. |
|---|---|
| Accession | NC_008639 |
| Length | 3,133,902 |
Click here to switch to the map view.
The map label for this gene is 119357414
Identifier: 119357414
GI number: 119357414
Start: 1834293
End: 1835090
Strand: Reverse
Name: 119357414
Synonym: Cpha266_1613
Alternate gene names: NA
Gene position: 1835090-1834293 (Counterclockwise)
Preceding gene: 119357422
Following gene: 119357413
Centisome position: 58.56
GC content: 59.27
Gene sequence:
>798_bases ATGGGTTTGATGGATGGGTTTTTGCGGCGGACGTTGTTTCCGATGCGGTTTGTGGTTGAGGATGGGGGTGGTGCGGGGGC TGCTGGTGGTGCCCAGGGGAGTGGTGAGGGTGATGGTTCTGCCGGTGCCGGTGATGCTGGTAAGGGTGGCAAGGGTGGCG CCGGGTACCCTGCCGGGCGTGAGGGGTTGTTTACGCAGGGGGATGTGGATGCTGCTGTTTCGAAGCGGTTGGAGTTGTTT GCAGGGGTGGATGTTGATGAGTATCGGGCTTTGAAGAGTGAGAAGGCGAAGCGGGAGCGTGAAGTGCTGGAGAAGCGGGG TGAGTTTGACAAGATTCTGGCTCAGACGGTGAAGGAGAAGGATGATGTGATCGGGTCGAAGGATGAGGAGATTGCTTCGC TGGTGGATCAGTTGAAGAAGATCAGGGTGGATAATGCTTTGCTTGGTGCGGCTTCGGCGGCGAGGGCGATCAAGCCGGGA CAGATTGTGATGCTGCTTAAGGGGAATGTGCATTATGACCGGAAGTCGGATTCGGTGGAGGTTCGGGAGAGTGGTGCTCC GTTGTATAAGGGGGGCAAGCCGGTTTCGGTTGATGAGTATGTGCAGGGGTTCCTGGCTTCGAATCCGCATTTCGTTCTGG CTGGGCCGGGTGGCAGCGGTGCTGCCGGGGGTACTGCGGGGCAGGTGTCGGGGTCGGCGTACAAGATTGGCGCTGCGGAT GCGAAGGATCCGGCGAAGTATCGGGCGGCGAAGGAGGCGGCTGCTAAGGCGGGGCTGCAGTTGGTGATTGAAAGATAG
Upstream 100 bases:
>100_bases CCTTTTTTTGTGCCCGAATAATAGATAATTATTTCTATATAATAGGATTTTGCTGTATATTTGTATTGATATATATTTCT ATTCACGTAATGGGGTGGTT
Downstream 100 bases:
>100_bases GACTTGATGGCTTGATAGCTGGTTAGCTGGAGAGTGGGATGAATGGGTTTGGTGATGATGATGTTTTTTGAATTGTAAAT GATAATGAGGTAAGGAATTA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 265; Mature: 264
Protein sequence:
>265_residues MGLMDGFLRRTLFPMRFVVEDGGGAGAAGGAQGSGEGDGSAGAGDAGKGGKGGAGYPAGREGLFTQGDVDAAVSKRLELF AGVDVDEYRALKSEKAKREREVLEKRGEFDKILAQTVKEKDDVIGSKDEEIASLVDQLKKIRVDNALLGAASAARAIKPG QIVMLLKGNVHYDRKSDSVEVRESGAPLYKGGKPVSVDEYVQGFLASNPHFVLAGPGGSGAAGGTAGQVSGSAYKIGAAD AKDPAKYRAAKEAAAKAGLQLVIER
Sequences:
>Translated_265_residues MGLMDGFLRRTLFPMRFVVEDGGGAGAAGGAQGSGEGDGSAGAGDAGKGGKGGAGYPAGREGLFTQGDVDAAVSKRLELF AGVDVDEYRALKSEKAKREREVLEKRGEFDKILAQTVKEKDDVIGSKDEEIASLVDQLKKIRVDNALLGAASAARAIKPG QIVMLLKGNVHYDRKSDSVEVRESGAPLYKGGKPVSVDEYVQGFLASNPHFVLAGPGGSGAAGGTAGQVSGSAYKIGAAD AKDPAKYRAAKEAAAKAGLQLVIER >Mature_264_residues GLMDGFLRRTLFPMRFVVEDGGGAGAAGGAQGSGEGDGSAGAGDAGKGGKGGAGYPAGREGLFTQGDVDAAVSKRLELFA GVDVDEYRALKSEKAKREREVLEKRGEFDKILAQTVKEKDDVIGSKDEEIASLVDQLKKIRVDNALLGAASAARAIKPGQ IVMLLKGNVHYDRKSDSVEVRESGAPLYKGGKPVSVDEYVQGFLASNPHFVLAGPGGSGAAGGTAGQVSGSAYKIGAADA KDPAKYRAAKEAAAKAGLQLVIER
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27269; Mature: 27138
Theoretical pI: Translated: 8.71; Mature: 8.71
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGLMDGFLRRTLFPMRFVVEDGGGAGAAGGAQGSGEGDGSAGAGDAGKGGKGGAGYPAGR CCHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC EGLFTQGDVDAAVSKRLELFAGVDVDEYRALKSEKAKREREVLEKRGEFDKILAQTVKEK CCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH DDVIGSKDEEIASLVDQLKKIRVDNALLGAASAARAIKPGQIVMLLKGNVHYDRKSDSVE HHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCEE VRESGAPLYKGGKPVSVDEYVQGFLASNPHFVLAGPGGSGAAGGTAGQVSGSAYKIGAAD ECCCCCCCCCCCCCCCHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCCCCCCEEEECCCC AKDPAKYRAAKEAAAKAGLQLVIER CCCHHHHHHHHHHHHHCCCEEEECC >Mature Secondary Structure GLMDGFLRRTLFPMRFVVEDGGGAGAAGGAQGSGEGDGSAGAGDAGKGGKGGAGYPAGR CHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC EGLFTQGDVDAAVSKRLELFAGVDVDEYRALKSEKAKREREVLEKRGEFDKILAQTVKEK CCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH DDVIGSKDEEIASLVDQLKKIRVDNALLGAASAARAIKPGQIVMLLKGNVHYDRKSDSVE HHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCEE VRESGAPLYKGGKPVSVDEYVQGFLASNPHFVLAGPGGSGAAGGTAGQVSGSAYKIGAAD ECCCCCCCCCCCCCCCHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCCCCCCEEEECCCC AKDPAKYRAAKEAAAKAGLQLVIER CCCHHHHHHHHHHHHHCCCEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA