| Definition | Chlorobium phaeobacteroides DSM 266 chromosome, complete genome. |
|---|---|
| Accession | NC_008639 |
| Length | 3,133,902 |
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The map label for this gene is 119357413
Identifier: 119357413
GI number: 119357413
Start: 1833055
End: 1833942
Strand: Reverse
Name: 119357413
Synonym: Cpha266_1612
Alternate gene names: NA
Gene position: 1833942-1833055 (Counterclockwise)
Preceding gene: 119357414
Following gene: 119357412
Centisome position: 58.52
GC content: 54.5
Gene sequence:
>888_bases GTGACGGATAAGGAGCTGAACAGCACGGGCGAGCAGATTATTGTGGATCATATCCAGCCGGCGGCGTATGCGATTGCGGA TGATATTGATATGAACCTGAATGCTTTGGCGAAGTTTGTTCCGTGGTATTACGATGTGGCTGCGACGACGGAGATCAAGG ATATTACGCGGGTGAAGAAGATTCTGCGGGATAACAAGGTGCCGCTGAATATTCCGGATACGTTGTTTTATGAGGTTGGC AGCGAGATGGAGGCGGGGTTTGCGGAGTTGTTTGCGAACAGCGGGTTTGCGGGTACGTCGGCTGAGGAGTTGCAGCGGAC GGGTGTGATTGGCATGAAGTTCGGGTTCAACATTTTTGCGAACCAGAATGTGGGGACGCATACGAAGGGTACGGCGTCGG TGTCGGCGCTTTTGACAAGCGGGGCTTTTCTGAAGGGTGCGACGGTGTTGAACCTGGATGCTGCTGCGGTGACGGGTACG CTGGTGAAGGGTGATTCGTTTGCGATTAATGGGGATCCTCAGCGGTATGCGGTGGTGAATGAGTCGCCGGTTACGGCTGC GGGGAATACGTTTACGGGTGTGCAGATTTTCCCTGCTCTGTCGAAGGATGTTGCGGATAATATTGCGGTGACGGTAAGCC TGGTGAACCATGTGGAGAACGTTGCGTATCACCGGAATGCGTTTGCGCTGGCGATGGCTCCGCTTTCGGAGATGGGGCGT GAGTTCAGTGTGAAGGTTGAGACGGTGTTTGATGAGGCGTCGGGGATTGCGTTGCGTGCGCGGATGTGGTATGACGCTGA CAAGTCGAAGACGAAGGTTGCGCTGGATGCGTTGTATGGGGTGAAGTGTCTGGATGCAAATCTTGCGGTGAAGGCGAGAA AGGCTTGA
Upstream 100 bases:
>100_bases CCGGGACGTTTACGGCGCAGGATGCTCCGTCGAATGATCAGGATATCAATGCTGAAGGGATGGAGATCAAGCTGGATAAG TGGAAGGAGGTGAAGTTCGG
Downstream 100 bases:
>100_bases TGGCTTGTTTGCTGGATGGCTGGATAGCGGGATGATGTGATGATGATGCGTGATGATGATGCGTGATGATGATGCGTGAT GACGATGCGTGGGGTTGGTA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 295; Mature: 294
Protein sequence:
>295_residues MTDKELNSTGEQIIVDHIQPAAYAIADDIDMNLNALAKFVPWYYDVAATTEIKDITRVKKILRDNKVPLNIPDTLFYEVG SEMEAGFAELFANSGFAGTSAEELQRTGVIGMKFGFNIFANQNVGTHTKGTASVSALLTSGAFLKGATVLNLDAAAVTGT LVKGDSFAINGDPQRYAVVNESPVTAAGNTFTGVQIFPALSKDVADNIAVTVSLVNHVENVAYHRNAFALAMAPLSEMGR EFSVKVETVFDEASGIALRARMWYDADKSKTKVALDALYGVKCLDANLAVKARKA
Sequences:
>Translated_295_residues MTDKELNSTGEQIIVDHIQPAAYAIADDIDMNLNALAKFVPWYYDVAATTEIKDITRVKKILRDNKVPLNIPDTLFYEVG SEMEAGFAELFANSGFAGTSAEELQRTGVIGMKFGFNIFANQNVGTHTKGTASVSALLTSGAFLKGATVLNLDAAAVTGT LVKGDSFAINGDPQRYAVVNESPVTAAGNTFTGVQIFPALSKDVADNIAVTVSLVNHVENVAYHRNAFALAMAPLSEMGR EFSVKVETVFDEASGIALRARMWYDADKSKTKVALDALYGVKCLDANLAVKARKA >Mature_294_residues TDKELNSTGEQIIVDHIQPAAYAIADDIDMNLNALAKFVPWYYDVAATTEIKDITRVKKILRDNKVPLNIPDTLFYEVGS EMEAGFAELFANSGFAGTSAEELQRTGVIGMKFGFNIFANQNVGTHTKGTASVSALLTSGAFLKGATVLNLDAAAVTGTL VKGDSFAINGDPQRYAVVNESPVTAAGNTFTGVQIFPALSKDVADNIAVTVSLVNHVENVAYHRNAFALAMAPLSEMGRE FSVKVETVFDEASGIALRARMWYDADKSKTKVALDALYGVKCLDANLAVKARKA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31612; Mature: 31481
Theoretical pI: Translated: 5.00; Mature: 5.00
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDKELNSTGEQIIVDHIQPAAYAIADDIDMNLNALAKFVPWYYDVAATTEIKDITRVKK CCCCCCCCCCCEEEEECCCCHHHEECCCCCCCHHHHHHHCCHHEEHHCCCHHHHHHHHHH ILRDNKVPLNIPDTLFYEVGSEMEAGFAELFANSGFAGTSAEELQRTGVIGMKFGFNIFA HHHCCCCCCCCCHHHHHHCCCCHHHHHHHHHHCCCCCCCCHHHHHHCCEEEEEECEEEEE NQNVGTHTKGTASVSALLTSGAFLKGATVLNLDAAAVTGTLVKGDSFAINGDPQRYAVVN CCCCCCCCCCHHHHHHHHHCCCCCCCCEEEEECHHHHEEEEEECCEEEECCCCCEEEEEC ESPVTAAGNTFTGVQIFPALSKDVADNIAVTVSLVNHVENVAYHRNAFALAMAPLSEMGR CCCCEECCCCCCCEEEECHHHHHHHCCCEEEHHHHHHHHHHHHHCCHHEEEECCHHHCCC EFSVKVETVFDEASGIALRARMWYDADKSKTKVALDALYGVKCLDANLAVKARKA EEEEEEEEEECCCCCEEEEEEEEECCCCCCHHHHHHHHHCCEEECCCEEEEEECC >Mature Secondary Structure TDKELNSTGEQIIVDHIQPAAYAIADDIDMNLNALAKFVPWYYDVAATTEIKDITRVKK CCCCCCCCCCEEEEECCCCHHHEECCCCCCCHHHHHHHCCHHEEHHCCCHHHHHHHHHH ILRDNKVPLNIPDTLFYEVGSEMEAGFAELFANSGFAGTSAEELQRTGVIGMKFGFNIFA HHHCCCCCCCCCHHHHHHCCCCHHHHHHHHHHCCCCCCCCHHHHHHCCEEEEEECEEEEE NQNVGTHTKGTASVSALLTSGAFLKGATVLNLDAAAVTGTLVKGDSFAINGDPQRYAVVN CCCCCCCCCCHHHHHHHHHCCCCCCCCEEEEECHHHHEEEEEECCEEEECCCCCEEEEEC ESPVTAAGNTFTGVQIFPALSKDVADNIAVTVSLVNHVENVAYHRNAFALAMAPLSEMGR CCCCEECCCCCCCEEEECHHHHHHHCCCEEEHHHHHHHHHHHHHCCHHEEEECCHHHCCC EFSVKVETVFDEASGIALRARMWYDADKSKTKVALDALYGVKCLDANLAVKARKA EEEEEEEEEECCCCCEEEEEEEEECCCCCCHHHHHHHHHCCEEECCCEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA