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The map label for this gene is hcpA [H]

Identifier: 119357390

GI number: 119357390

Start: 1803926

End: 1804417

Strand: Reverse

Name: hcpA [H]

Synonym: Cpha266_1588

Alternate gene names: 119357390

Gene position: 1804417-1803926 (Counterclockwise)

Preceding gene: 119357392

Following gene: 119357389

Centisome position: 57.58

GC content: 48.98

Gene sequence:

>492_bases
ATGGTAAATAATGCATACATGATCGTCATCGGTCAGATTCAGGGAAAAATCAAGGGCCCTGTGACCCTGGCAGGCAGACA
GGATTCATTCCGGGTGCATGGCTGTTCGTACGAGGTTGTGTCTCCAAGAGATCCGGGATCTGGTTTGCCGACAGGAAAGC
GGATGCACAAGCCTGTGACTGTTGTCAAAGATATCGATGGAGCGAGCCCTTTGTTTATGAGAGCTTTAATCACAAACGAG
AATATTAATGAAGTGGTGCTCCAGTTCTGTCATAAAGATGGCGCAGGCCGGGATATGCCGTATTACACGATACGTCTGTT
GAACGCCGGTTTGTCAGGCATCAGGATGCTGAGGAAATCAGATATACTTCCCGGTGCTGCTTCGTGGCCTTCCGAACGTG
AAGAATTGAGCTTTACCTATCAGCAGATAACCTGGAAATGGGAACAGGGGGGAATAAGTCTAACCGACGATTGGAAAGCG
CCAGTCGTGTGA

Upstream 100 bases:

>100_bases
ACGGTACGGTGATTTATGCCTCTCTATCTACCTTTGGAATTGGGGCTTTGTCAGGTCTTACCGTTGTTTTTTATCATAAA
CCCTTTTACATGAGCTGGTA

Downstream 100 bases:

>100_bases
GCTTTCAGGCGTTGTGATTGTCGATTGAGGCCCAACAGCGAAGCTGTCGGAGCAGGGAATATTCTGTGGTACGTCGGTTG
TTTTCCCGGATTTTCGTTAT

Product: hypothetical protein

Products: NA

Alternate protein names: Secreted protein hcp [H]

Number of amino acids: Translated: 163; Mature: 163

Protein sequence:

>163_residues
MVNNAYMIVIGQIQGKIKGPVTLAGRQDSFRVHGCSYEVVSPRDPGSGLPTGKRMHKPVTVVKDIDGASPLFMRALITNE
NINEVVLQFCHKDGAGRDMPYYTIRLLNAGLSGIRMLRKSDILPGAASWPSEREELSFTYQQITWKWEQGGISLTDDWKA
PVV

Sequences:

>Translated_163_residues
MVNNAYMIVIGQIQGKIKGPVTLAGRQDSFRVHGCSYEVVSPRDPGSGLPTGKRMHKPVTVVKDIDGASPLFMRALITNE
NINEVVLQFCHKDGAGRDMPYYTIRLLNAGLSGIRMLRKSDILPGAASWPSEREELSFTYQQITWKWEQGGISLTDDWKA
PVV
>Mature_163_residues
MVNNAYMIVIGQIQGKIKGPVTLAGRQDSFRVHGCSYEVVSPRDPGSGLPTGKRMHKPVTVVKDIDGASPLFMRALITNE
NINEVVLQFCHKDGAGRDMPYYTIRLLNAGLSGIRMLRKSDILPGAASWPSEREELSFTYQQITWKWEQGGISLTDDWKA
PVV

Specific function: Unknown

COG id: COG3157

COG function: function code S; Hemolysin-coregulated protein (uncharacterized)

Gene ontology:

Cell location: Secreted [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the hcp1 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017728
- InterPro:   IPR008514 [H]

Pfam domain/function: PF05638 DUF796 [H]

EC number: NA

Molecular weight: Translated: 18104; Mature: 18104

Theoretical pI: Translated: 9.11; Mature: 9.11

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVNNAYMIVIGQIQGKIKGPVTLAGRQDSFRVHGCSYEVVSPRDPGSGLPTGKRMHKPVT
CCCCEEEEEEEEECCCCCCCEEEECCCCCEEEECCEEEEECCCCCCCCCCCCCHHCCCEE
VVKDIDGASPLFMRALITNENINEVVLQFCHKDGAGRDMPYYTIRLLNAGLSGIRMLRKS
EEECCCCCCHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCEEEEEECCCHHHHHHHHHH
DILPGAASWPSEREELSFTYQQITWKWEQGGISLTDDWKAPVV
CCCCCCCCCCCCHHHHEEEEEHEEEEECCCCEEECCCCCCCCC
>Mature Secondary Structure
MVNNAYMIVIGQIQGKIKGPVTLAGRQDSFRVHGCSYEVVSPRDPGSGLPTGKRMHKPVT
CCCCEEEEEEEEECCCCCCCEEEECCCCCEEEECCEEEEECCCCCCCCCCCCCHHCCCEE
VVKDIDGASPLFMRALITNENINEVVLQFCHKDGAGRDMPYYTIRLLNAGLSGIRMLRKS
EEECCCCCCHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCEEEEEECCCHHHHHHHHHH
DILPGAASWPSEREELSFTYQQITWKWEQGGISLTDDWKAPVV
CCCCCCCCCCCCHHHHEEEEEHEEEEECCCCEEECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10984043 [H]