| Definition | Chlorobium phaeobacteroides DSM 266 chromosome, complete genome. |
|---|---|
| Accession | NC_008639 |
| Length | 3,133,902 |
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The map label for this gene is 119357389
Identifier: 119357389
GI number: 119357389
Start: 1802730
End: 1803452
Strand: Reverse
Name: 119357389
Synonym: Cpha266_1587
Alternate gene names: NA
Gene position: 1803452-1802730 (Counterclockwise)
Preceding gene: 119357390
Following gene: 119357383
Centisome position: 57.55
GC content: 43.85
Gene sequence:
>723_bases ATGTCAAAGTTCCGAACAATCATAATTGCATTATTTGCCATTCATACGCTTTTTCAAACGTATGTCGCCAAGGCTGATTC CAAACCGATTAATCTTCTGCCCATGTACGGCGGTACTGAGGTTGTCAAAACTGATTTTGAGAAGCATGCCGATGAGAAAT TCATCGCCGTAATGACAAAAAATGGCGTTTCGCGGGATTCTGCAGCGGTTATTAGCTGGATGATGGGCATGAATGCGCTT CAGGATAGGGATTCTGACACCGCAATGAAGCGTTTCAATCAATCGTGGCTTCTTGACCAAGCGTGTTATTTGCCCTATTG GGGCTTCGGCAAAATCATGATGACAAGAATGAATATAAAAGAGTCGCTTGAATATTTTGAGCGGAGTCTTGCAATGTTAC GAGCAAAGCCATTGCCAAGCATGAAAAAAACTCAACCTGTATTGTTTTTTGATGCAGCCATAGCGTACTCTATGGCATCA CTTGTCGATACATTAAAAACTTCGTTACACAGAAAAAGAGCAGATGTCCTTTTCACGCAATCCTTAGAGCAGGATCCGAA ATTCAGGGAGGGGTACATGGCTTGGCTGGCCTTTACCCTTATCAGCAGGGAATATCAAAAAGCCTGGGAAATTGTACATG ACGCTCGCAGGGCAGGTGTGCAGGATTTTTCGAAAGACCTCCTGAAGGAGTTGTCAGAAAAGATGCCCGAACCTCGAAAA TGA
Upstream 100 bases:
>100_bases TTCAGAATCCCCTCAAACGGTTGTTTGATATTAGGTGTATTTATTCGAAATGATTATTTTCGTACTATGGAAGTATCTCT TGAGTTAAATTAAGCCACCC
Downstream 100 bases:
>100_bases GCTTTGGTTGAAAGAATGGAGGTCGAAATAAATGGCACTGAATGTTCTGGACGGCAGCGTCACCATCGTCGTCAGTTTTC TGCTCTTGAGTGAAACCGAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 240; Mature: 239
Protein sequence:
>240_residues MSKFRTIIIALFAIHTLFQTYVAKADSKPINLLPMYGGTEVVKTDFEKHADEKFIAVMTKNGVSRDSAAVISWMMGMNAL QDRDSDTAMKRFNQSWLLDQACYLPYWGFGKIMMTRMNIKESLEYFERSLAMLRAKPLPSMKKTQPVLFFDAAIAYSMAS LVDTLKTSLHRKRADVLFTQSLEQDPKFREGYMAWLAFTLISREYQKAWEIVHDARRAGVQDFSKDLLKELSEKMPEPRK
Sequences:
>Translated_240_residues MSKFRTIIIALFAIHTLFQTYVAKADSKPINLLPMYGGTEVVKTDFEKHADEKFIAVMTKNGVSRDSAAVISWMMGMNAL QDRDSDTAMKRFNQSWLLDQACYLPYWGFGKIMMTRMNIKESLEYFERSLAMLRAKPLPSMKKTQPVLFFDAAIAYSMAS LVDTLKTSLHRKRADVLFTQSLEQDPKFREGYMAWLAFTLISREYQKAWEIVHDARRAGVQDFSKDLLKELSEKMPEPRK >Mature_239_residues SKFRTIIIALFAIHTLFQTYVAKADSKPINLLPMYGGTEVVKTDFEKHADEKFIAVMTKNGVSRDSAAVISWMMGMNALQ DRDSDTAMKRFNQSWLLDQACYLPYWGFGKIMMTRMNIKESLEYFERSLAMLRAKPLPSMKKTQPVLFFDAAIAYSMASL VDTLKTSLHRKRADVLFTQSLEQDPKFREGYMAWLAFTLISREYQKAWEIVHDARRAGVQDFSKDLLKELSEKMPEPRK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27753; Mature: 27621
Theoretical pI: Translated: 9.86; Mature: 9.86
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 6.2 %Met (Translated Protein) 6.7 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 5.9 %Met (Mature Protein) 6.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKFRTIIIALFAIHTLFQTYVAKADSKPINLLPMYGGTEVVKTDFEKHADEKFIAVMTK CCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCHHHHHHHHHHCCCCEEEEEEC NGVSRDSAAVISWMMGMNALQDRDSDTAMKRFNQSWLLDQACYLPYWGFGKIMMTRMNIK CCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH ESLEYFERSLAMLRAKPLPSMKKTQPVLFFDAAIAYSMASLVDTLKTSLHRKRADVLFTQ HHHHHHHHHHHHHHCCCCCCCHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SLEQDPKFREGYMAWLAFTLISREYQKAWEIVHDARRAGVQDFSKDLLKELSEKMPEPRK HHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure SKFRTIIIALFAIHTLFQTYVAKADSKPINLLPMYGGTEVVKTDFEKHADEKFIAVMTK CHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCHHHHHHHHHHCCCCEEEEEEC NGVSRDSAAVISWMMGMNALQDRDSDTAMKRFNQSWLLDQACYLPYWGFGKIMMTRMNIK CCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH ESLEYFERSLAMLRAKPLPSMKKTQPVLFFDAAIAYSMASLVDTLKTSLHRKRADVLFTQ HHHHHHHHHHHHHHCCCCCCCHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SLEQDPKFREGYMAWLAFTLISREYQKAWEIVHDARRAGVQDFSKDLLKELSEKMPEPRK HHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA