| Definition | Chlorobium phaeobacteroides DSM 266 chromosome, complete genome. |
|---|---|
| Accession | NC_008639 |
| Length | 3,133,902 |
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The map label for this gene is 119357380
Identifier: 119357380
GI number: 119357380
Start: 1794072
End: 1795022
Strand: Reverse
Name: 119357380
Synonym: Cpha266_1578
Alternate gene names: NA
Gene position: 1795022-1794072 (Counterclockwise)
Preceding gene: 119357381
Following gene: 119357379
Centisome position: 57.28
GC content: 55.1
Gene sequence:
>951_bases ATGCTTCGAGGACCGAGACTTGACGCTCCGGGAACCCTGCATCACGTGATCATCAGGGGGATCGATCAAGGGAGCATCGT TCGTGACGATACGGACAGGACAGCATTTGTGAGTCGCATGGGATTGCTTGCAAAAGGATCAGGCACGAGCATCTATGCGT TTGCACTTATGAGCAACGAGGTGAATATCCTGCTGAAAAGCGGTACGGACGGGCTCTCCGCCTACATGAGCAAGCTGCTT TCGGGGTATGCGCCGTATTTCAACCGGCGGCACCAGAGGGTCGGGCACCTCTTTCAGAACCGGTACAAGTCTGTCGTCTG CGAAGAAGAGACCTGTTTCGCCAAACTTGTGGCATACATCCATCTCATGCCTTTGCGGGCCAGGATTGTCGAGTCGCTGG AGCAGCTTGCATTGTATCCATGGAGCGGGCATCCCGTGCTGATGAACAAGGTTCGTTATGAGTGGATGGATCGTGACTAT GTTCTTCGGATTTTCGGTGGAAAGGGGAGCGTCGCAAAAAAGGCATATCTTGCATTTCTCGAAGAGGAGTTGAAGATCGA CAGGGAGCATGAGCTGTCGCAGGTTGGCTGGTCGAAGGTTGAGTCCATGCGCAAGAGTGGCTTTAAAGCCAGGGGTGACG AGCGGATTCTCGGCAGCGAGAAGTTTGTCAGGGAGGTGCTGAAAGAGGCCGCGGGAGTGACGGACGTTCTGCCGTTAGAA GAGAGGGTGTTTCTGCTGAGCGAAGCTGTCGAACAGGCATGCGAAGCAGCAGGCGTGACCGCGATGTTCCTCCGATCCGG AAGCAGGAGCGGTGTGCTGCCGTCACTGAGACGACAGATTGCAAGGATGGCTGCATTCGAGTTAGGCCTATCCTTTGCCG AGACGGCTCGACAGCTTGGCGTGACGACAAGCGCCGTGAGCAATATGCTGAAGAGAGAGTCGCCTGAATAA
Upstream 100 bases:
>100_bases AAGATGTTTTTGGACATCGATCGGTAACCTGCTGTTTTTTATAGTCTTGTGTGTCGCGTGTAAGGTAACTTTCCGTTCAG ATTCTAAAAAAGAAAGGCTA
Downstream 100 bases:
>100_bases TATTGGCATATCAGAACGGTTAAGAAGGAAGTTGAAATTTTTCCACAGGTGAAGGAAACGCAGAGAGCTCTTGTTTACAT GGATGATTCGCAGGGGGACT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 316; Mature: 316
Protein sequence:
>316_residues MLRGPRLDAPGTLHHVIIRGIDQGSIVRDDTDRTAFVSRMGLLAKGSGTSIYAFALMSNEVNILLKSGTDGLSAYMSKLL SGYAPYFNRRHQRVGHLFQNRYKSVVCEEETCFAKLVAYIHLMPLRARIVESLEQLALYPWSGHPVLMNKVRYEWMDRDY VLRIFGGKGSVAKKAYLAFLEEELKIDREHELSQVGWSKVESMRKSGFKARGDERILGSEKFVREVLKEAAGVTDVLPLE ERVFLLSEAVEQACEAAGVTAMFLRSGSRSGVLPSLRRQIARMAAFELGLSFAETARQLGVTTSAVSNMLKRESPE
Sequences:
>Translated_316_residues MLRGPRLDAPGTLHHVIIRGIDQGSIVRDDTDRTAFVSRMGLLAKGSGTSIYAFALMSNEVNILLKSGTDGLSAYMSKLL SGYAPYFNRRHQRVGHLFQNRYKSVVCEEETCFAKLVAYIHLMPLRARIVESLEQLALYPWSGHPVLMNKVRYEWMDRDY VLRIFGGKGSVAKKAYLAFLEEELKIDREHELSQVGWSKVESMRKSGFKARGDERILGSEKFVREVLKEAAGVTDVLPLE ERVFLLSEAVEQACEAAGVTAMFLRSGSRSGVLPSLRRQIARMAAFELGLSFAETARQLGVTTSAVSNMLKRESPE >Mature_316_residues MLRGPRLDAPGTLHHVIIRGIDQGSIVRDDTDRTAFVSRMGLLAKGSGTSIYAFALMSNEVNILLKSGTDGLSAYMSKLL SGYAPYFNRRHQRVGHLFQNRYKSVVCEEETCFAKLVAYIHLMPLRARIVESLEQLALYPWSGHPVLMNKVRYEWMDRDY VLRIFGGKGSVAKKAYLAFLEEELKIDREHELSQVGWSKVESMRKSGFKARGDERILGSEKFVREVLKEAAGVTDVLPLE ERVFLLSEAVEQACEAAGVTAMFLRSGSRSGVLPSLRRQIARMAAFELGLSFAETARQLGVTTSAVSNMLKRESPE
Specific function: Unknown
COG id: COG1943
COG function: function code L; Transposase and inactivated derivatives
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35368; Mature: 35368
Theoretical pI: Translated: 9.59; Mature: 9.59
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLRGPRLDAPGTLHHVIIRGIDQGSIVRDDTDRTAFVSRMGLLAKGSGTSIYAFALMSNE CCCCCCCCCCCHHHHHHHHCCCCCCEEECCCHHHHHHHHHHHHCCCCCCEEEEEEEECCC VNILLKSGTDGLSAYMSKLLSGYAPYFNRRHQRVGHLFQNRYKSVVCEEETCFAKLVAYI EEEEEECCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH HLMPLRARIVESLEQLALYPWSGHPVLMNKVRYEWMDRDYVLRIFGGKGSVAKKAYLAFL HHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHH EEELKIDREHELSQVGWSKVESMRKSGFKARGDERILGSEKFVREVLKEAAGVTDVLPLE HHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCHH ERVFLLSEAVEQACEAAGVTAMFLRSGSRSGVLPSLRRQIARMAAFELGLSFAETARQLG HHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHC VTTSAVSNMLKRESPE CHHHHHHHHHHHCCCC >Mature Secondary Structure MLRGPRLDAPGTLHHVIIRGIDQGSIVRDDTDRTAFVSRMGLLAKGSGTSIYAFALMSNE CCCCCCCCCCCHHHHHHHHCCCCCCEEECCCHHHHHHHHHHHHCCCCCCEEEEEEEECCC VNILLKSGTDGLSAYMSKLLSGYAPYFNRRHQRVGHLFQNRYKSVVCEEETCFAKLVAYI EEEEEECCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH HLMPLRARIVESLEQLALYPWSGHPVLMNKVRYEWMDRDYVLRIFGGKGSVAKKAYLAFL HHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHH EEELKIDREHELSQVGWSKVESMRKSGFKARGDERILGSEKFVREVLKEAAGVTDVLPLE HHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCHH ERVFLLSEAVEQACEAAGVTAMFLRSGSRSGVLPSLRRQIARMAAFELGLSFAETARQLG HHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHC VTTSAVSNMLKRESPE CHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA