| Definition | Chlorobium phaeobacteroides DSM 266 chromosome, complete genome. |
|---|---|
| Accession | NC_008639 |
| Length | 3,133,902 |
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The map label for this gene is 119357298
Identifier: 119357298
GI number: 119357298
Start: 1694849
End: 1695961
Strand: Reverse
Name: 119357298
Synonym: Cpha266_1494
Alternate gene names: NA
Gene position: 1695961-1694849 (Counterclockwise)
Preceding gene: 119357299
Following gene: 119357297
Centisome position: 54.12
GC content: 30.64
Gene sequence:
>1113_bases ATGAAAAAAAAGGATTCACAAAAAAACATGTATGCTCATTCCGAAAAGAAAGTTGAGCTCTTGCAAAAATATTTAGAAAT ATATCTAAATGTATTGAGTAATACGTTTGTGAAAAGAATTAATTTATTTGATCTTTTTTGTGGTCCTGGTATATATGAAA ATGAAGGTATTGGAAGCCCTTTCATAATGTTACAAGAAATTAAAAAAGCCTCAACTATTAATAATAAAAAAGCGATTGAA TATAACTGCTTATTCAATGACAATGATCGAGAAGTAATTGAGGTGTTAAAAAGGAATGTTAAAAGTAAGATTGATCATTG TTATGCCAAGATTAATTATTCTTGTCAAGATTACAAAGATGTAATTCGAGCCACAATATTAAGTATGCAGGAGCTTTTGA ATTCAGAAAAAGCTTTTGCCTTTATTGACCCATACCAGTATAAAGACATTAGTATTAGTGAGATAGAATCTATGCTCTGT ACAAAAAAAACAGAAATCTTACTTTTTCTTCCCACGCAATTTATGTTTCGTTTTGAATCAAATGGCACCCCAAAAAGTTT GAAACGTTTTATTGAAGAACTTGTGCCAATGGAAGAGTGGCCAAAAAGTAATACTGGAATTGATTTTATACAAAGTTTGA AAGAACATTTCAAGAATCATCTTGGTAATGATTATTACGTTGATACTTTTATCATTCAAAGAGAGGTGAATCAATATTTT AGCTTATTCTTTTTTACCAGTAATATTTTGGGGTTTGAAAAAATGCTAGAGGCCAAGTGGAAAATAGATAAAGACGAAGG TCGCGGTTGGATTTATGAGCATAGTTATAATTTATTTTCAGGTAATAAATCGTCTATAACGCAAAAATTTGAAAATGAGT TAAAAGAATATCTTTCAAGATCAAGAACAAATAAAGAGGTTTACGAGTTCACATTGCATAACGGCCATTTACCAAAGCAC ACGAATGAAGTCTTGAAGGCTTGGCAAAATGAGGGTATATTGTCAGTTTTAAAAAGTGATGGCGAACAAACGATAAAGGG CTCATTTTACTTGAATTATAAGGATTGGCGTGATCATCCTGGAAAAGTTACGATTCAAACAAAGCTTCAATAA
Upstream 100 bases:
>100_bases TCACACCGTTCGACGCCTATGGGGGTCGCGGCAGGATGTGGCAACTTTTCGGGGATCGTATGGATGGGATTATCGACGAA CTTAACGAAGCGTTGACGGT
Downstream 100 bases:
>100_bases TGGCACAATCACATATAGAGTGGACGGAGATGACCTGGAATCCTGTGACGGGATGCGACAAGGTATCCGATGGGTGCAGG TTCTGCTACGCTGAGGCGTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 370; Mature: 370
Protein sequence:
>370_residues MKKKDSQKNMYAHSEKKVELLQKYLEIYLNVLSNTFVKRINLFDLFCGPGIYENEGIGSPFIMLQEIKKASTINNKKAIE YNCLFNDNDREVIEVLKRNVKSKIDHCYAKINYSCQDYKDVIRATILSMQELLNSEKAFAFIDPYQYKDISISEIESMLC TKKTEILLFLPTQFMFRFESNGTPKSLKRFIEELVPMEEWPKSNTGIDFIQSLKEHFKNHLGNDYYVDTFIIQREVNQYF SLFFFTSNILGFEKMLEAKWKIDKDEGRGWIYEHSYNLFSGNKSSITQKFENELKEYLSRSRTNKEVYEFTLHNGHLPKH TNEVLKAWQNEGILSVLKSDGEQTIKGSFYLNYKDWRDHPGKVTIQTKLQ
Sequences:
>Translated_370_residues MKKKDSQKNMYAHSEKKVELLQKYLEIYLNVLSNTFVKRINLFDLFCGPGIYENEGIGSPFIMLQEIKKASTINNKKAIE YNCLFNDNDREVIEVLKRNVKSKIDHCYAKINYSCQDYKDVIRATILSMQELLNSEKAFAFIDPYQYKDISISEIESMLC TKKTEILLFLPTQFMFRFESNGTPKSLKRFIEELVPMEEWPKSNTGIDFIQSLKEHFKNHLGNDYYVDTFIIQREVNQYF SLFFFTSNILGFEKMLEAKWKIDKDEGRGWIYEHSYNLFSGNKSSITQKFENELKEYLSRSRTNKEVYEFTLHNGHLPKH TNEVLKAWQNEGILSVLKSDGEQTIKGSFYLNYKDWRDHPGKVTIQTKLQ >Mature_370_residues MKKKDSQKNMYAHSEKKVELLQKYLEIYLNVLSNTFVKRINLFDLFCGPGIYENEGIGSPFIMLQEIKKASTINNKKAIE YNCLFNDNDREVIEVLKRNVKSKIDHCYAKINYSCQDYKDVIRATILSMQELLNSEKAFAFIDPYQYKDISISEIESMLC TKKTEILLFLPTQFMFRFESNGTPKSLKRFIEELVPMEEWPKSNTGIDFIQSLKEHFKNHLGNDYYVDTFIIQREVNQYF SLFFFTSNILGFEKMLEAKWKIDKDEGRGWIYEHSYNLFSGNKSSITQKFENELKEYLSRSRTNKEVYEFTLHNGHLPKH TNEVLKAWQNEGILSVLKSDGEQTIKGSFYLNYKDWRDHPGKVTIQTKLQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 43701; Mature: 43701
Theoretical pI: Translated: 8.17; Mature: 8.17
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKKDSQKNMYAHSEKKVELLQKYLEIYLNVLSNTFVKRINLFDLFCGPGIYENEGIGSP CCCCCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCH FIMLQEIKKASTINNKKAIEYNCLFNDNDREVIEVLKRNVKSKIDHCYAKINYSCQDYKD HHHHHHHHHHHCCCCCCEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH VIRATILSMQELLNSEKAFAFIDPYQYKDISISEIESMLCTKKTEILLFLPTQFMFRFES HHHHHHHHHHHHHCCCCCEEEECCCCCCCCCHHHHHHHHHCCCCCEEEEECHHHEEEECC NGTPKSLKRFIEELVPMEEWPKSNTGIDFIQSLKEHFKNHLGNDYYVDTFIIQREVNQYF CCCHHHHHHHHHHHCCHHHCCCCCCCHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHH SLFFFTSNILGFEKMLEAKWKIDKDEGRGWIYEHSYNLFSGNKSSITQKFENELKEYLSR HHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHH SRTNKEVYEFTLHNGHLPKHTNEVLKAWQNEGILSVLKSDGEQTIKGSFYLNYKDWRDHP CCCCCEEEEEEECCCCCCHHHHHHHHHHHCCCHHHHHHCCCCCEEECEEEEEECCCCCCC GKVTIQTKLQ CEEEEEEECC >Mature Secondary Structure MKKKDSQKNMYAHSEKKVELLQKYLEIYLNVLSNTFVKRINLFDLFCGPGIYENEGIGSP CCCCCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCH FIMLQEIKKASTINNKKAIEYNCLFNDNDREVIEVLKRNVKSKIDHCYAKINYSCQDYKD HHHHHHHHHHHCCCCCCEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH VIRATILSMQELLNSEKAFAFIDPYQYKDISISEIESMLCTKKTEILLFLPTQFMFRFES HHHHHHHHHHHHHCCCCCEEEECCCCCCCCCHHHHHHHHHCCCCCEEEEECHHHEEEECC NGTPKSLKRFIEELVPMEEWPKSNTGIDFIQSLKEHFKNHLGNDYYVDTFIIQREVNQYF CCCHHHHHHHHHHHCCHHHCCCCCCCHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHH SLFFFTSNILGFEKMLEAKWKIDKDEGRGWIYEHSYNLFSGNKSSITQKFENELKEYLSR HHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHH SRTNKEVYEFTLHNGHLPKHTNEVLKAWQNEGILSVLKSDGEQTIKGSFYLNYKDWRDHP CCCCCEEEEEEECCCCCCHHHHHHHHHHHCCCHHHHHHCCCCCEEECEEEEEECCCCCCC GKVTIQTKLQ CEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA