| Definition | Chlorobium phaeobacteroides DSM 266 chromosome, complete genome. |
|---|---|
| Accession | NC_008639 |
| Length | 3,133,902 |
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The map label for this gene is pkn1 [H]
Identifier: 119357294
GI number: 119357294
Start: 1688873
End: 1691101
Strand: Reverse
Name: pkn1 [H]
Synonym: Cpha266_1490
Alternate gene names: 119357294
Gene position: 1691101-1688873 (Counterclockwise)
Preceding gene: 119357295
Following gene: 119357292
Centisome position: 53.96
GC content: 42.31
Gene sequence:
>2229_bases ATGGAAAAAATAATTGAAGCTGTTCTGGCATTGATTCCGTTTGGTAAGTGGTTAGAGTTGATCGGATTAAACAAAGAAAC AAGTGCCATTTTATCACTTATTGTAACGGCCACTCTGGGTTATGTTGTTGTAAAAGGATTGAAGAGTTTTCAGAAATGGC GGGATGTTGTTAAAGCAGCAAAAGACTTGAAACCTGAATTTGATTATTTCTCTATAAAAGATTTAAGCAGGATATTTATT CAAACAAAAGCGACAAGAGTATCTCCAAACAGGTTTGATAATCCTGATGAGGCCTATAAGCATGGATGGAATCCTTATGC TCTTATTGACTATATGTTGAAAACCTCGTTTAACGAAAAAGTTGAAAGTGAAAAATTTTATCTTGTCCTTGCTGATTCAG GAATGGGAAAGACTGCTTTTATGGTGAATCTTTATTTAAAAAACTATTCTATATATAATTTTTTCTCCCGAAATAAATAT GCGATGACGCTGCTGCGTTTTCAGAGTCCAGATAAAAATAAGCCGGTTGATATCCTGGAAAGATTGAAAAGTATAAAACA GGAGGATATAAAAAACACAATTCTTTTGCTGGATGGATTGGATGAAGATCCCTTTATAATTTCAAGGGATAGCGCTGTTT CTGACGAAGAGGCATTTAATAAACGGATAGATCAGATCGTATCGGCCACACGAATTTACAAGGATGTGGTTATTACCTGT CGTACACAGTATTTTCCACAGCAGGAAACAGATGCCTATGAGTTGCATGTCAGAAAGCCAGATGGGAAGGGCATGTATAA ACTTCAGAAATACTATATATTTCCCTTTTCAGACAGTGATATTCAGAAATATCTTGACCGAAAATATGGTGTGTTCAGAT TCTGGAACACAGAGAAAAAGAAGAGTGCTCAATTAATAGCAAAAGATAACAAGAGTCTTCTGGCGCGACCAATGCTGATG AACTATATCGATTATCTTGTTGAGGAAAATAATATTTATACGTGTACCTCTCAAGTATATCATGTGCTTATCGAGAAGTG GCTGAAACGAGAGGCTGATAAATGGAAGTCGGAAGCTGAGAAAAAGGCATTCATCGATAATTTAAGAAAGTTATCAATGA GTGTCGCGCTTGAAATTTATCATAACTGGAGGAGTGATGGCAAGCTTTCCATCCCAAAAAATCGCGCAAAAGAGATTGCG GACGAGTATAATATTACGCTCTCCGCTGATGAGGTGCATGGAAAATCATTATTGACCTGTGATGCCTATTTGAACTGGAA GTTCGCCCATAAATCGATACTCGAATATTTCATAGCCAAACAGGCTGCTGAAGATACAGGTTTTGCTGTGAAGTTGCAGT TTGCGGGTATGAATATGACGAGGAAGTTCTGTTCAGAGTTTGGCTTGAGTTCACTGATCGAGTCAAATTATGTTCTGATT CGAGGTGACGAGTTTACCATGGGGAGCCCGAAACACGAAGTTGACAGGTCAGATAATGAAACGGAACATCAGGTAAAACT CTCTGATTATTATCTCTGTAAATATGCCGTTACGGTAGCGGATTTTAAACGGTTTGCCGAAGAGATCGGGTACACTACGG ATGCCGAAACCGCTGGCAGCAGTTCTGTTTTTGATGGCAAAGCGTGGAATAAAAAAGTGGGTATAAACTGGCGGCATGGA GTTTCCGAAAGTTTACGCAGTGCCGGAGAGTACAATCATCCTGTGTTGCATGTCAGTTGGAACGATGCCGTTGCCTATGC CGGGTGGCTCTCCTTGCAAACCGGAAAATCGTTCAGGCTGCCAACAGAGGCAGAGTGGGAGTATGCGTGCCGGGCAGGAA AGGGAGAGCCGTTCAGTACCGGCGAGAACCTCACGACCGACCAGGCAAATTATGACGGAAACTATCCCTATAATGGCAAC AGAAAGGGAGTGTTCAGGGGAACCACGATAGCGTGTGATGCGCTTGAACCAAATGCATTGGGTTTGTACAATATGCACGG TAATGTTTGGGAGTGGTGCAGCGACAGGTATGGGGATAAATATTATGATGAATGCAAAGCCAAAGGTATTGTTGAAAATC CGGTTGGCCCTGAAACCGGTTCGCTCCGTGTGCTTCGTGGAGGTAGCTGGTTCAACTATGCGAGGATCTGTCGGTCGGCT TATCGCGACGGCGACTCCCCCGACTACCGCAGCGACGACGCCGGCTTCCGCCTGGCCTTCGTCCCGTAG
Upstream 100 bases:
>100_bases TTTCGGGAGATTCTGGGTGTGCTGAACAATGGAAAGTGAAATGCAGCTAAACAACGTGAGAAAATAAATCAGGTTCCCTC AATAACATCCCTGTTGTTTT
Downstream 100 bases:
>100_bases TCAGTTGGCAGCTCATTCCGACTTTACTTTGAGCAAGAGGGCTGTTACAAAAAATTGGTGAGCGGCAGCAAGGGACGCAG CGCCGCACGCCAATTTTTTC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 742; Mature: 742
Protein sequence:
>742_residues MEKIIEAVLALIPFGKWLELIGLNKETSAILSLIVTATLGYVVVKGLKSFQKWRDVVKAAKDLKPEFDYFSIKDLSRIFI QTKATRVSPNRFDNPDEAYKHGWNPYALIDYMLKTSFNEKVESEKFYLVLADSGMGKTAFMVNLYLKNYSIYNFFSRNKY AMTLLRFQSPDKNKPVDILERLKSIKQEDIKNTILLLDGLDEDPFIISRDSAVSDEEAFNKRIDQIVSATRIYKDVVITC RTQYFPQQETDAYELHVRKPDGKGMYKLQKYYIFPFSDSDIQKYLDRKYGVFRFWNTEKKKSAQLIAKDNKSLLARPMLM NYIDYLVEENNIYTCTSQVYHVLIEKWLKREADKWKSEAEKKAFIDNLRKLSMSVALEIYHNWRSDGKLSIPKNRAKEIA DEYNITLSADEVHGKSLLTCDAYLNWKFAHKSILEYFIAKQAAEDTGFAVKLQFAGMNMTRKFCSEFGLSSLIESNYVLI RGDEFTMGSPKHEVDRSDNETEHQVKLSDYYLCKYAVTVADFKRFAEEIGYTTDAETAGSSSVFDGKAWNKKVGINWRHG VSESLRSAGEYNHPVLHVSWNDAVAYAGWLSLQTGKSFRLPTEAEWEYACRAGKGEPFSTGENLTTDQANYDGNYPYNGN RKGVFRGTTIACDALEPNALGLYNMHGNVWEWCSDRYGDKYYDECKAKGIVENPVGPETGSLRVLRGGSWFNYARICRSA YRDGDSPDYRSDDAGFRLAFVP
Sequences:
>Translated_742_residues MEKIIEAVLALIPFGKWLELIGLNKETSAILSLIVTATLGYVVVKGLKSFQKWRDVVKAAKDLKPEFDYFSIKDLSRIFI QTKATRVSPNRFDNPDEAYKHGWNPYALIDYMLKTSFNEKVESEKFYLVLADSGMGKTAFMVNLYLKNYSIYNFFSRNKY AMTLLRFQSPDKNKPVDILERLKSIKQEDIKNTILLLDGLDEDPFIISRDSAVSDEEAFNKRIDQIVSATRIYKDVVITC RTQYFPQQETDAYELHVRKPDGKGMYKLQKYYIFPFSDSDIQKYLDRKYGVFRFWNTEKKKSAQLIAKDNKSLLARPMLM NYIDYLVEENNIYTCTSQVYHVLIEKWLKREADKWKSEAEKKAFIDNLRKLSMSVALEIYHNWRSDGKLSIPKNRAKEIA DEYNITLSADEVHGKSLLTCDAYLNWKFAHKSILEYFIAKQAAEDTGFAVKLQFAGMNMTRKFCSEFGLSSLIESNYVLI RGDEFTMGSPKHEVDRSDNETEHQVKLSDYYLCKYAVTVADFKRFAEEIGYTTDAETAGSSSVFDGKAWNKKVGINWRHG VSESLRSAGEYNHPVLHVSWNDAVAYAGWLSLQTGKSFRLPTEAEWEYACRAGKGEPFSTGENLTTDQANYDGNYPYNGN RKGVFRGTTIACDALEPNALGLYNMHGNVWEWCSDRYGDKYYDECKAKGIVENPVGPETGSLRVLRGGSWFNYARICRSA YRDGDSPDYRSDDAGFRLAFVP >Mature_742_residues MEKIIEAVLALIPFGKWLELIGLNKETSAILSLIVTATLGYVVVKGLKSFQKWRDVVKAAKDLKPEFDYFSIKDLSRIFI QTKATRVSPNRFDNPDEAYKHGWNPYALIDYMLKTSFNEKVESEKFYLVLADSGMGKTAFMVNLYLKNYSIYNFFSRNKY AMTLLRFQSPDKNKPVDILERLKSIKQEDIKNTILLLDGLDEDPFIISRDSAVSDEEAFNKRIDQIVSATRIYKDVVITC RTQYFPQQETDAYELHVRKPDGKGMYKLQKYYIFPFSDSDIQKYLDRKYGVFRFWNTEKKKSAQLIAKDNKSLLARPMLM NYIDYLVEENNIYTCTSQVYHVLIEKWLKREADKWKSEAEKKAFIDNLRKLSMSVALEIYHNWRSDGKLSIPKNRAKEIA DEYNITLSADEVHGKSLLTCDAYLNWKFAHKSILEYFIAKQAAEDTGFAVKLQFAGMNMTRKFCSEFGLSSLIESNYVLI RGDEFTMGSPKHEVDRSDNETEHQVKLSDYYLCKYAVTVADFKRFAEEIGYTTDAETAGSSSVFDGKAWNKKVGINWRHG VSESLRSAGEYNHPVLHVSWNDAVAYAGWLSLQTGKSFRLPTEAEWEYACRAGKGEPFSTGENLTTDQANYDGNYPYNGN RKGVFRGTTIACDALEPNALGLYNMHGNVWEWCSDRYGDKYYDECKAKGIVENPVGPETGSLRVLRGGSWFNYARICRSA YRDGDSPDYRSDDAGFRLAFVP
Specific function: Together with the serine/threonine kinase pknD, may play a role in the specific interactions with host proteins during intracellular growth [H]
COG id: COG1262
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 protein kinase domain [H]
Homologues:
Organism=Homo sapiens, GI38202250, Length=297, Percent_Identity=35.6902356902357, Blast_Score=153, Evalue=7e-37, Organism=Homo sapiens, GI257470975, Length=280, Percent_Identity=35.7142857142857, Blast_Score=145, Evalue=1e-34, Organism=Homo sapiens, GI257470977, Length=294, Percent_Identity=33.3333333333333, Blast_Score=131, Evalue=2e-30, Organism=Homo sapiens, GI194248087, Length=286, Percent_Identity=31.8181818181818, Blast_Score=117, Evalue=4e-26, Organism=Homo sapiens, GI194248088, Length=296, Percent_Identity=31.4189189189189, Blast_Score=112, Evalue=1e-24, Organism=Homo sapiens, GI226437577, Length=192, Percent_Identity=35.9375, Blast_Score=101, Evalue=2e-21, Organism=Homo sapiens, GI194248090, Length=195, Percent_Identity=31.2820512820513, Blast_Score=75, Evalue=2e-13, Organism=Drosophila melanogaster, GI20130397, Length=289, Percent_Identity=34.2560553633218, Blast_Score=126, Evalue=4e-29,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016187 - InterPro: IPR011009 - InterPro: IPR000719 - InterPro: IPR017442 - InterPro: IPR005532 [H]
Pfam domain/function: PF03781 DUF323; PF00069 Pkinase [H]
EC number: =2.7.11.1 [H]
Molecular weight: Translated: 85291; Mature: 85291
Theoretical pI: Translated: 7.70; Mature: 7.70
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEKIIEAVLALIPFGKWLELIGLNKETSAILSLIVTATLGYVVVKGLKSFQKWRDVVKAA CHHHHHHHHHHHCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KDLKPEFDYFSIKDLSRIFIQTKATRVSPNRFDNPDEAYKHGWNPYALIDYMLKTSFNEK HHCCCCCCEECHHHHHHHHHHHCCCCCCCCCCCCHHHHHHCCCCHHHHHHHHHHHCHHHH VESEKFYLVLADSGMGKTAFMVNLYLKNYSIYNFFSRNKYAMTLLRFQSPDKNKPVDILE CCCCEEEEEEECCCCCCEEEEEEEEEECCEEEEHHCCCCEEEEEEEECCCCCCCCHHHHH RLKSIKQEDIKNTILLLDGLDEDPFIISRDSAVSDEEAFNKRIDQIVSATRIYKDVVITC HHHHHHHHHCCCEEEEEECCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHEEE RTQYFPQQETDAYELHVRKPDGKGMYKLQKYYIFPFSDSDIQKYLDRKYGVFRFWNTEKK ECCCCCCCCCCCEEEEEECCCCCCCEEEEEEEEEECCCHHHHHHHHHCCCEEEEECCCCH KSAQLIAKDNKSLLARPMLMNYIDYLVEENNIYTCTSQVYHVLIEKWLKREADKWKSEAE HHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHH KKAFIDNLRKLSMSVALEIYHNWRSDGKLSIPKNRAKEIADEYNITLSADEVHGKSLLTC HHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCHHHHHHHHHHCCEEEEECCCCCCEEEEE DAYLNWKFAHKSILEYFIAKQAAEDTGFAVKLQFAGMNMTRKFCSEFGLSSLIESNYVLI EHHEEEHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCHHHHHHHHHCHHHHHHCCEEEE RGDEFTMGSPKHEVDRSDNETEHQVKLSDYYLCKYAVTVADFKRFAEEIGYTTDAETAGS ECCCCCCCCCCHHCCCCCCCCHHEEEECCEEEEHHHHHHHHHHHHHHHCCCCCCCCCCCC SSVFDGKAWNKKVGINWRHGVSESLRSAGEYNHPVLHVSWNDAVAYAGWLSLQTGKSFRL CCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCEEEEECCCCEEEEEEEEEECCCCCCC PTEAEWEYACRAGKGEPFSTGENLTTDQANYDGNYPYNGNRKGVFRGTTIACDALEPNAL CCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCEEEEECCCCCCE GLYNMHGNVWEWCSDRYGDKYYDECKAKGIVENPVGPETGSLRVLRGGSWFNYARICRSA EEEECCCCHHHHHHHHCCCHHHHHHHCCCCCCCCCCCCCCCEEEEECCCCHHHHHHHHHH YRDGDSPDYRSDDAGFRLAFVP HCCCCCCCCCCCCCCEEEEECC >Mature Secondary Structure MEKIIEAVLALIPFGKWLELIGLNKETSAILSLIVTATLGYVVVKGLKSFQKWRDVVKAA CHHHHHHHHHHHCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KDLKPEFDYFSIKDLSRIFIQTKATRVSPNRFDNPDEAYKHGWNPYALIDYMLKTSFNEK HHCCCCCCEECHHHHHHHHHHHCCCCCCCCCCCCHHHHHHCCCCHHHHHHHHHHHCHHHH VESEKFYLVLADSGMGKTAFMVNLYLKNYSIYNFFSRNKYAMTLLRFQSPDKNKPVDILE CCCCEEEEEEECCCCCCEEEEEEEEEECCEEEEHHCCCCEEEEEEEECCCCCCCCHHHHH RLKSIKQEDIKNTILLLDGLDEDPFIISRDSAVSDEEAFNKRIDQIVSATRIYKDVVITC HHHHHHHHHCCCEEEEEECCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHEEE RTQYFPQQETDAYELHVRKPDGKGMYKLQKYYIFPFSDSDIQKYLDRKYGVFRFWNTEKK ECCCCCCCCCCCEEEEEECCCCCCCEEEEEEEEEECCCHHHHHHHHHCCCEEEEECCCCH KSAQLIAKDNKSLLARPMLMNYIDYLVEENNIYTCTSQVYHVLIEKWLKREADKWKSEAE HHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHH KKAFIDNLRKLSMSVALEIYHNWRSDGKLSIPKNRAKEIADEYNITLSADEVHGKSLLTC HHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCHHHHHHHHHHCCEEEEECCCCCCEEEEE DAYLNWKFAHKSILEYFIAKQAAEDTGFAVKLQFAGMNMTRKFCSEFGLSSLIESNYVLI EHHEEEHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCHHHHHHHHHCHHHHHHCCEEEE RGDEFTMGSPKHEVDRSDNETEHQVKLSDYYLCKYAVTVADFKRFAEEIGYTTDAETAGS ECCCCCCCCCCHHCCCCCCCCHHEEEECCEEEEHHHHHHHHHHHHHHHCCCCCCCCCCCC SSVFDGKAWNKKVGINWRHGVSESLRSAGEYNHPVLHVSWNDAVAYAGWLSLQTGKSFRL CCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCEEEEECCCCEEEEEEEEEECCCCCCC PTEAEWEYACRAGKGEPFSTGENLTTDQANYDGNYPYNGNRKGVFRGTTIACDALEPNAL CCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCEEEEECCCCCCE GLYNMHGNVWEWCSDRYGDKYYDECKAKGIVENPVGPETGSLRVLRGGSWFNYARICRSA EEEECCCCHHHHHHHHCCCHHHHHHHCCCCCCCCCCCCCCCEEEEECCCCHHHHHHHHHH YRDGDSPDYRSDDAGFRLAFVP HCCCCCCCCCCCCCCEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 10192388; 10684935; 10871362 [H]