| Definition | Chlorobium phaeobacteroides DSM 266 chromosome, complete genome. |
|---|---|
| Accession | NC_008639 |
| Length | 3,133,902 |
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The map label for this gene is 119357292
Identifier: 119357292
GI number: 119357292
Start: 1685483
End: 1686454
Strand: Reverse
Name: 119357292
Synonym: Cpha266_1487
Alternate gene names: NA
Gene position: 1686454-1685483 (Counterclockwise)
Preceding gene: 119357294
Following gene: 119357291
Centisome position: 53.81
GC content: 57.3
Gene sequence:
>972_bases ATGCCGAGAGGAGCAAGACTGGACTCGCCGGGTACGCTGCATCATGTGATGGTGCGGGGCATCGAAGGCAACAGCATTGT TGCCGATGACGAAGACCGGATGTATTTCGTTTCGCGGATGGGGAAGGTCGCGGCGGCAACCGGCACGAGCATCTATGCCT GGGCGCTCTTGACCAACCATGCGCATATCCTGCTGAAGAGCGGAGCTTCCGGCCTGTCGACATTCATGCGCAAACTGCTG ACAGGATATGCCACAGGGTACAACCTCAGACACAAGCGTCACGGCCATCTTTTCCAGAACCGGTACAAGTCGATTGTCTG CGAGGAAGAGCCCTATTTTCTCAGGCTGGTCAGCTACATCCATCTCAACCCCCTTCGAGCAGGTCTTGCTGAATCGCTTG AAGATCTGGAACGTTATCCGTCGAGCGGTCATGCGGTGGTGATGAACCGGATACGGCATAAGTGGCAGGACCGGAACTAT GTGCTCGGATACTTCGGCAAGAGGGAATCGTCTGCCCTGCAAGCGTATCGGGAGTTCGTTGCAGAAGAGAGTGGACGCGG TCGTCAGCCGGAACTGACAGGAGGCGGACTTATCCGGTCGATAGGCGGCTGGTCGGAAGTGAAGTCGCTGAGGAAGCGGC AAGAGAAGCAGTTCAGCGACGAGCGGATTCTCGGAAGCGGCGAGTTCGTCAAAGAGATTCTCGACGATGTTGAAGAATCC GTGAAGGAGAGGCTGCCGGCAACAGCAGCAGCGATGGAAGCCGGGGAACGGCTGGTGAGCGCATGCGAAGAGGCGGGAAT AAGTGTTCTTGCGCTGCAGGGCGGAAGCCGGAAGCGGGAGTGTACGGAGTTGCGAAAACGGCTTGCACTGGAATATGTGC TCGAGCTCGGGATGACCTATGCCGGATCGGCGCGTCTGCTGGGGATTTCAGCAGTTGCGGTCAATCAGATCGTGAAACGT TGCGGGTTGTAA
Upstream 100 bases:
>100_bases GGGGACGCTCACAACTACGTAAACTAATGCGATAAAATTCTTACTTTTCAGAAGTAACGCTTTGCTGCAGACAGGATCAA AACCATAACAACGAACACCA
Downstream 100 bases:
>100_bases GTTTACGTAGTTGTGAGCGTCCCCTCCTACCCCTGTTACTTCCCGCCGCCGGTGCGTGGCGTGGACATTCCGAAGAAATC CGGAGGGATGAGAACGCTTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 323; Mature: 322
Protein sequence:
>323_residues MPRGARLDSPGTLHHVMVRGIEGNSIVADDEDRMYFVSRMGKVAAATGTSIYAWALLTNHAHILLKSGASGLSTFMRKLL TGYATGYNLRHKRHGHLFQNRYKSIVCEEEPYFLRLVSYIHLNPLRAGLAESLEDLERYPSSGHAVVMNRIRHKWQDRNY VLGYFGKRESSALQAYREFVAEESGRGRQPELTGGGLIRSIGGWSEVKSLRKRQEKQFSDERILGSGEFVKEILDDVEES VKERLPATAAAMEAGERLVSACEEAGISVLALQGGSRKRECTELRKRLALEYVLELGMTYAGSARLLGISAVAVNQIVKR CGL
Sequences:
>Translated_323_residues MPRGARLDSPGTLHHVMVRGIEGNSIVADDEDRMYFVSRMGKVAAATGTSIYAWALLTNHAHILLKSGASGLSTFMRKLL TGYATGYNLRHKRHGHLFQNRYKSIVCEEEPYFLRLVSYIHLNPLRAGLAESLEDLERYPSSGHAVVMNRIRHKWQDRNY VLGYFGKRESSALQAYREFVAEESGRGRQPELTGGGLIRSIGGWSEVKSLRKRQEKQFSDERILGSGEFVKEILDDVEES VKERLPATAAAMEAGERLVSACEEAGISVLALQGGSRKRECTELRKRLALEYVLELGMTYAGSARLLGISAVAVNQIVKR CGL >Mature_322_residues PRGARLDSPGTLHHVMVRGIEGNSIVADDEDRMYFVSRMGKVAAATGTSIYAWALLTNHAHILLKSGASGLSTFMRKLLT GYATGYNLRHKRHGHLFQNRYKSIVCEEEPYFLRLVSYIHLNPLRAGLAESLEDLERYPSSGHAVVMNRIRHKWQDRNYV LGYFGKRESSALQAYREFVAEESGRGRQPELTGGGLIRSIGGWSEVKSLRKRQEKQFSDERILGSGEFVKEILDDVEESV KERLPATAAAMEAGERLVSACEEAGISVLALQGGSRKRECTELRKRLALEYVLELGMTYAGSARLLGISAVAVNQIVKRC GL
Specific function: Unknown
COG id: COG1943
COG function: function code L; Transposase and inactivated derivatives
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35988; Mature: 35857
Theoretical pI: Translated: 9.52; Mature: 9.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPRGARLDSPGTLHHVMVRGIEGNSIVADDEDRMYFVSRMGKVAAATGTSIYAWALLTNH CCCCCCCCCCCHHHHHHHCCCCCCEEEECCCCHHHHHHHHCHHHHHCCCHHHHHHHHHCC AHILLKSGASGLSTFMRKLLTGYATGYNLRHKRHGHLFQNRYKSIVCEEEPYFLRLVSYI CEEEEECCCHHHHHHHHHHHHHHHCCCCCCHHHCCHHHHHHHHHHCCCCCCHHHHHHHHH HLNPLRAGLAESLEDLERYPSSGHAVVMNRIRHKWQDRNYVLGYFGKRESSALQAYREFV HCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHH AEESGRGRQPELTGGGLIRSIGGWSEVKSLRKRQEKQFSDERILGSGEFVKEILDDVEES HHCCCCCCCCCCCCCCHHHHCCCHHHHHHHHHHHHHHCCHHHCCCCHHHHHHHHHHHHHH VKERLPATAAAMEAGERLVSACEEAGISVLALQGGSRKRECTELRKRLALEYVLELGMTY HHHHCCHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCC AGSARLLGISAVAVNQIVKRCGL CCCCHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure PRGARLDSPGTLHHVMVRGIEGNSIVADDEDRMYFVSRMGKVAAATGTSIYAWALLTNH CCCCCCCCCCHHHHHHHCCCCCCEEEECCCCHHHHHHHHCHHHHHCCCHHHHHHHHHCC AHILLKSGASGLSTFMRKLLTGYATGYNLRHKRHGHLFQNRYKSIVCEEEPYFLRLVSYI CEEEEECCCHHHHHHHHHHHHHHHCCCCCCHHHCCHHHHHHHHHHCCCCCCHHHHHHHHH HLNPLRAGLAESLEDLERYPSSGHAVVMNRIRHKWQDRNYVLGYFGKRESSALQAYREFV HCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHH AEESGRGRQPELTGGGLIRSIGGWSEVKSLRKRQEKQFSDERILGSGEFVKEILDDVEES HHCCCCCCCCCCCCCCHHHHCCCHHHHHHHHHHHHHHCCHHHCCCCHHHHHHHHHHHHHH VKERLPATAAAMEAGERLVSACEEAGISVLALQGGSRKRECTELRKRLALEYVLELGMTY HHHHCCHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCC AGSARLLGISAVAVNQIVKRCGL CCCCHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA