| Definition | Chlorobium phaeobacteroides DSM 266 chromosome, complete genome. |
|---|---|
| Accession | NC_008639 |
| Length | 3,133,902 |
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The map label for this gene is 119357278
Identifier: 119357278
GI number: 119357278
Start: 1669238
End: 1670038
Strand: Reverse
Name: 119357278
Synonym: Cpha266_1471
Alternate gene names: NA
Gene position: 1670038-1669238 (Counterclockwise)
Preceding gene: 119357280
Following gene: 119357277
Centisome position: 53.29
GC content: 46.19
Gene sequence:
>801_bases ATGTCATCATGGGGAAGAATTGAAAAAAATGCCCGGATAGCGATAGCCATCATACTTTCCTTGATGTTCGCGATATCTGC ATTTGGAGATTGCAGAGGAGATAGGGATAGCCATCTGCTGAGAAACTATGACGGAACTATTGGCGATAATGCTCATGTCC GGATGACGATCACGGTTAACGATGATGCGATAAGGGGTGAGTATTGCTATGCTTCGCAATTAATGAATATCAGCCTCCGA GGCAGGGTTGTTGACGGCTCCAGGTTTGTGATCGATGCATTTGATTCTTCAGGAAGGATTATCGGACGTTTCGATGGAGA GTTTCCGACAAAAGATCCTCGCGGCAAGTTCGGCGACAGCGAACTGCAGTGTGAAGTTATGGTTGGCACCTGGTCTGCCG GAGGCAATTCTTTCGAAAAACTGCCGTTCTATCTGACATTGGAAAGCCAGACTGGCGGAACATTGGAACACCGGTATTCC GTAGCGGGTGCTGCCGATGACAAGCTTATTGACCGAACCGCTCAACGCTTTTGGGAGGCAGTGAAACGAGGAGATAAACA GACGGTGGCATCTCTTGTCAAATACCCGATAACGATTTATACGAAAAAAGGTTATAAGAAGATTCGTCATGCGGAATCTT TGGTGCGGAATTATGATGTCATATTCACACCGGGTTATGTTGATGCGATTTCAAAAGCAATACCGAAAAATATGTTCGTC CGGGATCAGGGAATAATGCTTGGAGCCGGGGATGTGTGGTTTGGTCCGGATGGCAAGGTTATAGCGCTTAATAATTTTTA A
Upstream 100 bases:
>100_bases TCGGGCGGGTGCTTCACTGATCCGTAATCTGAAAAGAAAGGCGATTTCACGTATATTGCAAGAGAATAGATTGTTATAAA TACGCAAACGATCATGCGGT
Downstream 100 bases:
>100_bases CTTAGGTTTTGTTGTATTCGGAACGGATTGACAGGCATGCAGTAAGATTTAGCGTAAGGGGATGGGATGCTCGCGACTAC GTTTGTTTTTCGTCATAACG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 266; Mature: 265
Protein sequence:
>266_residues MSSWGRIEKNARIAIAIILSLMFAISAFGDCRGDRDSHLLRNYDGTIGDNAHVRMTITVNDDAIRGEYCYASQLMNISLR GRVVDGSRFVIDAFDSSGRIIGRFDGEFPTKDPRGKFGDSELQCEVMVGTWSAGGNSFEKLPFYLTLESQTGGTLEHRYS VAGAADDKLIDRTAQRFWEAVKRGDKQTVASLVKYPITIYTKKGYKKIRHAESLVRNYDVIFTPGYVDAISKAIPKNMFV RDQGIMLGAGDVWFGPDGKVIALNNF
Sequences:
>Translated_266_residues MSSWGRIEKNARIAIAIILSLMFAISAFGDCRGDRDSHLLRNYDGTIGDNAHVRMTITVNDDAIRGEYCYASQLMNISLR GRVVDGSRFVIDAFDSSGRIIGRFDGEFPTKDPRGKFGDSELQCEVMVGTWSAGGNSFEKLPFYLTLESQTGGTLEHRYS VAGAADDKLIDRTAQRFWEAVKRGDKQTVASLVKYPITIYTKKGYKKIRHAESLVRNYDVIFTPGYVDAISKAIPKNMFV RDQGIMLGAGDVWFGPDGKVIALNNF >Mature_265_residues SSWGRIEKNARIAIAIILSLMFAISAFGDCRGDRDSHLLRNYDGTIGDNAHVRMTITVNDDAIRGEYCYASQLMNISLRG RVVDGSRFVIDAFDSSGRIIGRFDGEFPTKDPRGKFGDSELQCEVMVGTWSAGGNSFEKLPFYLTLESQTGGTLEHRYSV AGAADDKLIDRTAQRFWEAVKRGDKQTVASLVKYPITIYTKKGYKKIRHAESLVRNYDVIFTPGYVDAISKAIPKNMFVR DQGIMLGAGDVWFGPDGKVIALNNF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29591; Mature: 29460
Theoretical pI: Translated: 8.74; Mature: 8.74
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSWGRIEKNARIAIAIILSLMFAISAFGDCRGDRDSHLLRNYDGTIGDNAHVRMTITVN CCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHCCCCCCCCCCEEEEEEEEC DDAIRGEYCYASQLMNISLRGRVVDGSRFVIDAFDSSGRIIGRFDGEFPTKDPRGKFGDS CCCCCCCCEEHHHHEEEEEEEEEECCCEEEEEEECCCCCEEEEECCCCCCCCCCCCCCCC ELQCEVMVGTWSAGGNSFEKLPFYLTLESQTGGTLEHRYSVAGAADDKLIDRTAQRFWEA CEEEEEEEEEECCCCCCCCCCEEEEEEECCCCCCCCEEEEECCCCCHHHHHHHHHHHHHH VKRGDKQTVASLVKYPITIYTKKGYKKIRHAESLVRNYDVIFTPGYVDAISKAIPKNMFV HHCCCHHHHHHHHHCCEEEEECCHHHHHHHHHHHHHCCCEEEECCHHHHHHHHCCCCEEE RDQGIMLGAGDVWFGPDGKVIALNNF ECCCEEEECCCEEECCCCCEEEECCC >Mature Secondary Structure SSWGRIEKNARIAIAIILSLMFAISAFGDCRGDRDSHLLRNYDGTIGDNAHVRMTITVN CCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHCCCCCCCCCCEEEEEEEEC DDAIRGEYCYASQLMNISLRGRVVDGSRFVIDAFDSSGRIIGRFDGEFPTKDPRGKFGDS CCCCCCCCEEHHHHEEEEEEEEEECCCEEEEEEECCCCCEEEEECCCCCCCCCCCCCCCC ELQCEVMVGTWSAGGNSFEKLPFYLTLESQTGGTLEHRYSVAGAADDKLIDRTAQRFWEA CEEEEEEEEEECCCCCCCCCCEEEEEEECCCCCCCCEEEEECCCCCHHHHHHHHHHHHHH VKRGDKQTVASLVKYPITIYTKKGYKKIRHAESLVRNYDVIFTPGYVDAISKAIPKNMFV HHCCCHHHHHHHHHCCEEEEECCHHHHHHHHHHHHHCCCEEEECCHHHHHHHHCCCCEEE RDQGIMLGAGDVWFGPDGKVIALNNF ECCCEEEECCCEEECCCCCEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA