| Definition | Chlorobium phaeobacteroides DSM 266 chromosome, complete genome. |
|---|---|
| Accession | NC_008639 |
| Length | 3,133,902 |
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The map label for this gene is paaI [C]
Identifier: 119357277
GI number: 119357277
Start: 1668614
End: 1669015
Strand: Reverse
Name: paaI [C]
Synonym: Cpha266_1470
Alternate gene names: 119357277
Gene position: 1669015-1668614 (Counterclockwise)
Preceding gene: 119357278
Following gene: 119357276
Centisome position: 53.26
GC content: 45.52
Gene sequence:
>402_bases ATGAATGACGAATACATTAAAAATGTGAAAAACGACAGGTTTGCACAACTGTTGGGTATCGAGATCATTGAAGCGTATCC GGGATATGCGCTGGTTGAGTTGGTGATTGAGGAGAAGCATAAAAACGGGATAGATATTGTTCAGGGCGGCGTGATATTTA CGCTCGCCGATTATGCGTTTGCCGTGGCGTGTAATGCCGACGGAACTGCTACGGTAGGGATAAATGCTTCGATTTCTTAT TTCAACGCGCCAAAGGGATCCCGTATCAGAGCGGAAGCAAAAGAAGAGAGCAAACAGAAAAAGATATGCGGGTATAAAGT GGAAATAAAAGATGAAGACGGAACGCTGATAGCGTCGTTCTCGGGGTTGGGATACAGGAAGAGAACGAAAGAAGGCGGGT AA
Upstream 100 bases:
>100_bases TTGCTGCCGGCAGGAACAAATCCATAATTATAAAGGGCAATCTCGACAGGAGCAGGAGTGGTCGCGCCAGGTACGCGTTA ACAATTAATCAGGGATGCCG
Downstream 100 bases:
>100_bases GTTTCCCGGAGTTCTCATTGCCGTACCTGCCGCATATTTCCTTTACGGAACAGAAGCAATCGCGAAACAAAATCAGGGAA ACCATGAACGAGACCATATC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 133; Mature: 133
Protein sequence:
>133_residues MNDEYIKNVKNDRFAQLLGIEIIEAYPGYALVELVIEEKHKNGIDIVQGGVIFTLADYAFAVACNADGTATVGINASISY FNAPKGSRIRAEAKEESKQKKICGYKVEIKDEDGTLIASFSGLGYRKRTKEGG
Sequences:
>Translated_133_residues MNDEYIKNVKNDRFAQLLGIEIIEAYPGYALVELVIEEKHKNGIDIVQGGVIFTLADYAFAVACNADGTATVGINASISY FNAPKGSRIRAEAKEESKQKKICGYKVEIKDEDGTLIASFSGLGYRKRTKEGG >Mature_133_residues MNDEYIKNVKNDRFAQLLGIEIIEAYPGYALVELVIEEKHKNGIDIVQGGVIFTLADYAFAVACNADGTATVGINASISY FNAPKGSRIRAEAKEESKQKKICGYKVEIKDEDGTLIASFSGLGYRKRTKEGG
Specific function: Phenylacetic acid aerobic catabolism. [C]
COG id: COG2050
COG function: function code Q; Uncharacterized protein, possibly involved in aromatic compounds catabolism
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the thioesterase PaaI family [H]
Homologues:
Organism=Escherichia coli, GI1787662, Length=118, Percent_Identity=33.8983050847458, Blast_Score=70, Evalue=6e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003736 - InterPro: IPR006683 [H]
Pfam domain/function: PF03061 4HBT [H]
EC number: NA
Molecular weight: Translated: 14542; Mature: 14542
Theoretical pI: Translated: 5.96; Mature: 5.96
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNDEYIKNVKNDRFAQLLGIEIIEAYPGYALVELVIEEKHKNGIDIVQGGVIFTLADYAF CCCHHHHHCCCCHHHHHHHHHEEECCCCHHHHHHHHHHCCCCCCEEEECCEEEEEECCEE AVACNADGTATVGINASISYFNAPKGSRIRAEAKEESKQKKICGYKVEIKDEDGTLIASF EEEECCCCEEEEEECCEEEEEECCCCCEEECHHHHHHHHHHHCCEEEEEECCCCEEEEEE SGLGYRKRTKEGG CCCCCCCCCCCCC >Mature Secondary Structure MNDEYIKNVKNDRFAQLLGIEIIEAYPGYALVELVIEEKHKNGIDIVQGGVIFTLADYAF CCCHHHHHCCCCHHHHHHHHHEEECCCCHHHHHHHHHHCCCCCCEEEECCEEEEEECCEE AVACNADGTATVGINASISYFNAPKGSRIRAEAKEESKQKKICGYKVEIKDEDGTLIASF EEEECCCCEEEEEECCEEEEEECCCCCEEECHHHHHHHHHHHCCEEEEEECCCCEEEEEE SGLGYRKRTKEGG CCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9389475 [H]