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The map label for this gene is 119357242

Identifier: 119357242

GI number: 119357242

Start: 1636337

End: 1638061

Strand: Reverse

Name: 119357242

Synonym: Cpha266_1434

Alternate gene names: NA

Gene position: 1638061-1636337 (Counterclockwise)

Preceding gene: 119357243

Following gene: 119357241

Centisome position: 52.27

GC content: 43.13

Gene sequence:

>1725_bases
ATGATTCTGCATGCACTGTACGACTATTATCAGCGAAAAGCTGCCGATCCGGAAAGCGGTATTGCTCCGGAGGGGTTTGA
ATGGAAGGAAATTCCGTTTGTGATAGTGATCGATCAGGTGGGCAATTTTATCACTTTTGAAGATACCCGCGAAGGTGATG
GAAAGAAGAAATGGGCAAAAAAATATTTGTTACCAAAGTCTATTCATCGTCCCGGATCAAATTCATGGATGACAAGTTTT
TTGCTCTGGGATCATTACGGTTATGTTCTTGGTCATGCAAGAGGCGAGAGTGACAAAGATCAGAAAATGGCTCATAAGCA
GATGCCAACTTTTATAAAAAAGATTCAAGCGTTGCCATCAGAAGTAAAAGAGGATGAAGGAGTGATTGCTGTGATACGAT
TTTATGAAAATGGCGGATATGAAAAGGTCAAGAGTGCGCACAACTGGAGTGAATGCGCCAAAATCGTTGGTTGTAATTTG
AGTTTCAGGATTGATGGTGAAAGCGATCTTGTTCCTTGCAGGGATGCAGTGAGGAAGTATGTTGCATCTCAGTGCAGCGA
TAATACTGATGGTGTTTCAGGATTATGTCTTATTACAGGAGAAAATGCAGCAATAGCCAGGATTCACAGCGATACTCCGA
TAAATAAGGATTCAAAGAAATTTGTGTCGTTTCAGAAGAGTTCTGGGTATGACTCTTATGGAAAAGAACAGGCATTCAAT
GCGCCAATCAGTAAGTCAGCTGAGTTCGCCTATACTACTACCATGAACATGTTGTTGGGCAAGGAGTCCAAGAATAAAGT
ACAGGTCGGAGATGCGACGACCGTTTTCTGGTCGCAAAAGCAAGAGGCCTTTGAAGAGGTATTTCCAGCATTGTTCGGTT
ACCCGAAAGATGATCCTGATGCGGATGTTAAAGCAGTTAGGGCGCTGTATGAAGGAGTCAATACAGGCCATGCAAACATG
GATTCAGACACGCGATTCTACGTGCTTGGACTCGCACCGAACTCAGCTCGTATTTCTGTTCGTTTCTGGCATACCGGAAC
CATTGCGGAATTTGCCGGGAACATCCGACAGCATTTCGATGATCTTGCCATTATACGTAGCCAGAAAGATAGCGACCATT
TTTCGATGTTCTGGTTGTTATCGGCAATGGCTCACGAAGGTAAGGTCGATAATGTTCCACCAAATCTTTCGGGGCAGATT
TTTCAATCGGTCATCACTGGTGGTTTGTATCCAGCAACGATGCTTCAGCAGGCAATCCGGCGAATCCGTGCTACGCAAGC
TAAAGATCTAAAGAATAGGAGTACTCAAGCAAGTATTCTGAAAGCATATCTTAACCGTTTTTCCAGAATTTATAAAACCA
AAGAAAAGGAGATAAACGTGGCTCTTGATCCAACTAATGACAATCCCGGTTATCGGCTTGGACGCCTATTTGCTGTTCTT
GAAAAAATTCAGGAAGAAGCAAGTCCCGGTATCAATGCAACGATTCGTGATCGCTTTTATGGAGCGGCATCTTCGACCCC
GGTGACTGTTTTTCCGCAATTGCTAAAACTGAAAAATCACCATCTCTCAAAACTTAAAAATGTCGGTCGGCGGGTGAACT
TTGAAAGGATACTTGCCTCTATTTTTGATGGCATTGGTAACGATATGCCATCGCATCTATCAATGGAAGATCAGGCTCGT
TTTGCGATTGGTTATTACCACCAGCGACAAGATTTTAAAAAATGA

Upstream 100 bases:

>100_bases
TTCAAAAGAACGTGAAGGAGCCTCCGCCAGCATTTTTCAGGGTCAGTATGGAAAACGGGGTAATCAATGTTCCGGCATGG
GATAGTGAGGAGGTGAGAAA

Downstream 100 bases:

>100_bases
AAGATTTCAATAACAGTAATGAAAACAAGGGAGAATAATTATGACTACTGTAGATAAACGCTATGATTTTGTTCTACTTT
TCGATGTTCAGGACGGAAAC

Product: CRISPR-associated RAMP Csd1 family protein

Products: NA

Alternate protein names: CRISPR-Associated Csd1 Family Protein; CRISPR-Associated RAMP Csd1 Family Protein; Csd1 Family CRISPR-Associated Protein; Crispr-Protein; CRISPR-Associated Protein; CRISPR-Associated Protein Csd2 Family; Crispr-Associated Protein Csd1 Family

Number of amino acids: Translated: 574; Mature: 574

Protein sequence:

>574_residues
MILHALYDYYQRKAADPESGIAPEGFEWKEIPFVIVIDQVGNFITFEDTREGDGKKKWAKKYLLPKSIHRPGSNSWMTSF
LLWDHYGYVLGHARGESDKDQKMAHKQMPTFIKKIQALPSEVKEDEGVIAVIRFYENGGYEKVKSAHNWSECAKIVGCNL
SFRIDGESDLVPCRDAVRKYVASQCSDNTDGVSGLCLITGENAAIARIHSDTPINKDSKKFVSFQKSSGYDSYGKEQAFN
APISKSAEFAYTTTMNMLLGKESKNKVQVGDATTVFWSQKQEAFEEVFPALFGYPKDDPDADVKAVRALYEGVNTGHANM
DSDTRFYVLGLAPNSARISVRFWHTGTIAEFAGNIRQHFDDLAIIRSQKDSDHFSMFWLLSAMAHEGKVDNVPPNLSGQI
FQSVITGGLYPATMLQQAIRRIRATQAKDLKNRSTQASILKAYLNRFSRIYKTKEKEINVALDPTNDNPGYRLGRLFAVL
EKIQEEASPGINATIRDRFYGAASSTPVTVFPQLLKLKNHHLSKLKNVGRRVNFERILASIFDGIGNDMPSHLSMEDQAR
FAIGYYHQRQDFKK

Sequences:

>Translated_574_residues
MILHALYDYYQRKAADPESGIAPEGFEWKEIPFVIVIDQVGNFITFEDTREGDGKKKWAKKYLLPKSIHRPGSNSWMTSF
LLWDHYGYVLGHARGESDKDQKMAHKQMPTFIKKIQALPSEVKEDEGVIAVIRFYENGGYEKVKSAHNWSECAKIVGCNL
SFRIDGESDLVPCRDAVRKYVASQCSDNTDGVSGLCLITGENAAIARIHSDTPINKDSKKFVSFQKSSGYDSYGKEQAFN
APISKSAEFAYTTTMNMLLGKESKNKVQVGDATTVFWSQKQEAFEEVFPALFGYPKDDPDADVKAVRALYEGVNTGHANM
DSDTRFYVLGLAPNSARISVRFWHTGTIAEFAGNIRQHFDDLAIIRSQKDSDHFSMFWLLSAMAHEGKVDNVPPNLSGQI
FQSVITGGLYPATMLQQAIRRIRATQAKDLKNRSTQASILKAYLNRFSRIYKTKEKEINVALDPTNDNPGYRLGRLFAVL
EKIQEEASPGINATIRDRFYGAASSTPVTVFPQLLKLKNHHLSKLKNVGRRVNFERILASIFDGIGNDMPSHLSMEDQAR
FAIGYYHQRQDFKK
>Mature_574_residues
MILHALYDYYQRKAADPESGIAPEGFEWKEIPFVIVIDQVGNFITFEDTREGDGKKKWAKKYLLPKSIHRPGSNSWMTSF
LLWDHYGYVLGHARGESDKDQKMAHKQMPTFIKKIQALPSEVKEDEGVIAVIRFYENGGYEKVKSAHNWSECAKIVGCNL
SFRIDGESDLVPCRDAVRKYVASQCSDNTDGVSGLCLITGENAAIARIHSDTPINKDSKKFVSFQKSSGYDSYGKEQAFN
APISKSAEFAYTTTMNMLLGKESKNKVQVGDATTVFWSQKQEAFEEVFPALFGYPKDDPDADVKAVRALYEGVNTGHANM
DSDTRFYVLGLAPNSARISVRFWHTGTIAEFAGNIRQHFDDLAIIRSQKDSDHFSMFWLLSAMAHEGKVDNVPPNLSGQI
FQSVITGGLYPATMLQQAIRRIRATQAKDLKNRSTQASILKAYLNRFSRIYKTKEKEINVALDPTNDNPGYRLGRLFAVL
EKIQEEASPGINATIRDRFYGAASSTPVTVFPQLLKLKNHHLSKLKNVGRRVNFERILASIFDGIGNDMPSHLSMEDQAR
FAIGYYHQRQDFKK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 64688; Mature: 64688

Theoretical pI: Translated: 9.03; Mature: 9.03

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MILHALYDYYQRKAADPESGIAPEGFEWKEIPFVIVIDQVGNFITFEDTREGDGKKKWAK
CHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEECCCCEEEECCCCCCCCHHHHHH
KYLLPKSIHRPGSNSWMTSFLLWDHYGYVLGHARGESDKDQKMAHKQMPTFIKKIQALPS
HHCCCHHHCCCCCCHHHHHHHHHHHHHHHEEECCCCCCHHHHHHHHHHHHHHHHHHHHHH
EVKEDEGVIAVIRFYENGGYEKVKSAHNWSECAKIVGCNLSFRIDGESDLVPCRDAVRKY
HHCCCCCEEEEEEEECCCCHHHHHHCCCHHHHHHHHCCCEEEEECCCCCCCCHHHHHHHH
VASQCSDNTDGVSGLCLITGENAAIARIHSDTPINKDSKKFVSFQKSSGYDSYGKEQAFN
HHHHCCCCCCCCCEEEEEECCCCEEEEEECCCCCCCCHHHHHHHHCCCCCCCCCCHHHCC
APISKSAEFAYTTTMNMLLGKESKNKVQVGDATTVFWSQKQEAFEEVFPALFGYPKDDPD
CCCCCCCCEEHHHHHHHHHCCCCCCEEEECCCEEEEHHHHHHHHHHHHHHHHCCCCCCCC
ADVKAVRALYEGVNTGHANMDSDTRFYVLGLAPNSARISVRFWHTGTIAEFAGNIRQHFD
HHHHHHHHHHHCCCCCCCCCCCCCEEEEEEECCCCCEEEEEEEECCCHHHHHHHHHHHHH
DLAIIRSQKDSDHFSMFWLLSAMAHEGKVDNVPPNLSGQIFQSVITGGLYPATMLQQAIR
HHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHH
RIRATQAKDLKNRSTQASILKAYLNRFSRIYKTKEKEINVALDPTNDNPGYRLGRLFAVL
HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCHHHHHHHHHH
EKIQEEASPGINATIRDRFYGAASSTPVTVFPQLLKLKNHHLSKLKNVGRRVNFERILAS
HHHHHHHCCCCCEEHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH
IFDGIGNDMPSHLSMEDQARFAIGYYHQRQDFKK
HHHHHCCCCCCCCCCCCCHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MILHALYDYYQRKAADPESGIAPEGFEWKEIPFVIVIDQVGNFITFEDTREGDGKKKWAK
CHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEECCCCEEEECCCCCCCCHHHHHH
KYLLPKSIHRPGSNSWMTSFLLWDHYGYVLGHARGESDKDQKMAHKQMPTFIKKIQALPS
HHCCCHHHCCCCCCHHHHHHHHHHHHHHHEEECCCCCCHHHHHHHHHHHHHHHHHHHHHH
EVKEDEGVIAVIRFYENGGYEKVKSAHNWSECAKIVGCNLSFRIDGESDLVPCRDAVRKY
HHCCCCCEEEEEEEECCCCHHHHHHCCCHHHHHHHHCCCEEEEECCCCCCCCHHHHHHHH
VASQCSDNTDGVSGLCLITGENAAIARIHSDTPINKDSKKFVSFQKSSGYDSYGKEQAFN
HHHHCCCCCCCCCEEEEEECCCCEEEEEECCCCCCCCHHHHHHHHCCCCCCCCCCHHHCC
APISKSAEFAYTTTMNMLLGKESKNKVQVGDATTVFWSQKQEAFEEVFPALFGYPKDDPD
CCCCCCCCEEHHHHHHHHHCCCCCCEEEECCCEEEEHHHHHHHHHHHHHHHHCCCCCCCC
ADVKAVRALYEGVNTGHANMDSDTRFYVLGLAPNSARISVRFWHTGTIAEFAGNIRQHFD
HHHHHHHHHHHCCCCCCCCCCCCCEEEEEEECCCCCEEEEEEEECCCHHHHHHHHHHHHH
DLAIIRSQKDSDHFSMFWLLSAMAHEGKVDNVPPNLSGQIFQSVITGGLYPATMLQQAIR
HHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHH
RIRATQAKDLKNRSTQASILKAYLNRFSRIYKTKEKEINVALDPTNDNPGYRLGRLFAVL
HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCHHHHHHHHHH
EKIQEEASPGINATIRDRFYGAASSTPVTVFPQLLKLKNHHLSKLKNVGRRVNFERILAS
HHHHHHHCCCCCEEHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH
IFDGIGNDMPSHLSMEDQARFAIGYYHQRQDFKK
HHHHHCCCCCCCCCCCCCHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA