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The map label for this gene is rutD [H]

Identifier: 119357219

GI number: 119357219

Start: 1606437

End: 1607276

Strand: Reverse

Name: rutD [H]

Synonym: Cpha266_1410

Alternate gene names: 119357219

Gene position: 1607276-1606437 (Counterclockwise)

Preceding gene: 119357220

Following gene: 119357217

Centisome position: 51.29

GC content: 43.93

Gene sequence:

>840_bases
ATGCTTCACTATAAAACATATGAACTGGCCGATACAGAAGCTCCCTGGGTTGTTTTTGTGCATGGCGCGGGGGGAAGTTC
CTCGATATGGTTTTTGCAGATAAAAGAGTTTATAAAGCATTTCAACGTACTGCTTGTCGATCTCAGAGGTCATGGCAAAT
CAAAGAATATCATTGCAGTCAAGGAAGATCATAATTATAATTTCGAGGATATAACGCTTGATATTATTGAGGTTCTTGAC
AAGCTCAGAATTCAAAAGGCACATTTTATTGGGATTTCACTTGGTACGATTCTTATCCGCAACATCAGCGAACTTGTTCC
TGACCGCGTCAGCTCAATGATAATGGGCGGAGCGATAATCCGTCTTAACATCAGGGCCAAAGTGCTTGTGACGCTTGGCA
ATATGTTCAAACGGGTTGTACCCTATATGTGGCTCTACAGTTTTTTTGCCTGGATCATCATGCCGAGGGAGCGTCACAAG
AAGTCACGCCTGCTGTTTGTCAATGAAGCAAAAAAGGTTGCACAAAAGGAGTTCATGCGGTGGTTCAGGCTTACCTATGA
GCTGACTCCGCTACTGAAATATTTTGAAGAGAAGGATACCGCTATTCCTACGCTCTATCTCATGGGGGAAGAGGATCATA
TGTTTCTTCCCGCAGTTGAGTATATCATTACCAAGCACACCAACTCATGGCTTCAGGTTATCGGTAATTCCGGGCACGTA
TGCAATGTCGATCAGCCAAAGGAGTTCAACGAGCGTGCCATTGCATTTCTCAAGAAAATGTCGTCTGTGCAGCAGAGAAC
TTTCGAGATGGAAGAGTATGCCGCTTATGCCGTTGTTTAA

Upstream 100 bases:

>100_bases
TCGAGTTTATCAGGGTGATTCGCGCAACCCTGTAACTTTTTGTTCGCGCGGCTTGTTTATACATCATATAGTTTAACAGC
AATTAAAAAAGTGTTCTTCA

Downstream 100 bases:

>100_bases
ATGATCGGTTTGTTGTAATTGTTCATGGCATGTTCAATCCCGTTAACGACGACATCAAGCGCTGCTTCTCTGCATACGGG
AATTACTTTTTCCATCACTA

Product: alpha/beta hydrolase fold

Products: NA

Alternate protein names: Aminohydrolase [H]

Number of amino acids: Translated: 279; Mature: 279

Protein sequence:

>279_residues
MLHYKTYELADTEAPWVVFVHGAGGSSSIWFLQIKEFIKHFNVLLVDLRGHGKSKNIIAVKEDHNYNFEDITLDIIEVLD
KLRIQKAHFIGISLGTILIRNISELVPDRVSSMIMGGAIIRLNIRAKVLVTLGNMFKRVVPYMWLYSFFAWIIMPRERHK
KSRLLFVNEAKKVAQKEFMRWFRLTYELTPLLKYFEEKDTAIPTLYLMGEEDHMFLPAVEYIITKHTNSWLQVIGNSGHV
CNVDQPKEFNERAIAFLKKMSSVQQRTFEMEEYAAYAVV

Sequences:

>Translated_279_residues
MLHYKTYELADTEAPWVVFVHGAGGSSSIWFLQIKEFIKHFNVLLVDLRGHGKSKNIIAVKEDHNYNFEDITLDIIEVLD
KLRIQKAHFIGISLGTILIRNISELVPDRVSSMIMGGAIIRLNIRAKVLVTLGNMFKRVVPYMWLYSFFAWIIMPRERHK
KSRLLFVNEAKKVAQKEFMRWFRLTYELTPLLKYFEEKDTAIPTLYLMGEEDHMFLPAVEYIITKHTNSWLQVIGNSGHV
CNVDQPKEFNERAIAFLKKMSSVQQRTFEMEEYAAYAVV
>Mature_279_residues
MLHYKTYELADTEAPWVVFVHGAGGSSSIWFLQIKEFIKHFNVLLVDLRGHGKSKNIIAVKEDHNYNFEDITLDIIEVLD
KLRIQKAHFIGISLGTILIRNISELVPDRVSSMIMGGAIIRLNIRAKVLVTLGNMFKRVVPYMWLYSFFAWIIMPRERHK
KSRLLFVNEAKKVAQKEFMRWFRLTYELTPLLKYFEEKDTAIPTLYLMGEEDHMFLPAVEYIITKHTNSWLQVIGNSGHV
CNVDQPKEFNERAIAFLKKMSSVQQRTFEMEEYAAYAVV

Specific function: May increase the rate of spontaneous hydrolysis of aminoacrylate to malonic semialdehyde. Required to remove a toxic intermediate produce in the pyrimidine nitrogen degradation [H]

COG id: COG0596

COG function: function code R; Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the AB hydrolase superfamily. Hydrolase RutD family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000073
- InterPro:   IPR019913 [H]

Pfam domain/function: PF00561 Abhydrolase_1 [H]

EC number: NA

Molecular weight: Translated: 32582; Mature: 32582

Theoretical pI: Translated: 9.33; Mature: 9.33

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLHYKTYELADTEAPWVVFVHGAGGSSSIWFLQIKEFIKHFNVLLVDLRGHGKSKNIIAV
CCCEEEEECCCCCCCEEEEEECCCCCCCEEHHHHHHHHHHHCEEEEEEECCCCCCCEEEE
KEDHNYNFEDITLDIIEVLDKLRIQKAHFIGISLGTILIRNISELVPDRVSSMIMGGAII
ECCCCCCHHHHHHHHHHHHHHHHHHHHHEEEHHHHHHHHHHHHHHHHHHHHHHHHCCEEE
RLNIRAKVLVTLGNMFKRVVPYMWLYSFFAWIIMPRERHKKSRLLFVNEAKKVAQKEFMR
EEEEHEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCEEEEHHHHHHHHHHHHH
WFRLTYELTPLLKYFEEKDTAIPTLYLMGEEDHMFLPAVEYIITKHTNSWLQVIGNSGHV
HHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCEEHHHHHHHHHHCCCHHHHEECCCCCE
CNVDQPKEFNERAIAFLKKMSSVQQRTFEMEEYAAYAVV
ECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECC
>Mature Secondary Structure
MLHYKTYELADTEAPWVVFVHGAGGSSSIWFLQIKEFIKHFNVLLVDLRGHGKSKNIIAV
CCCEEEEECCCCCCCEEEEEECCCCCCCEEHHHHHHHHHHHCEEEEEEECCCCCCCEEEE
KEDHNYNFEDITLDIIEVLDKLRIQKAHFIGISLGTILIRNISELVPDRVSSMIMGGAII
ECCCCCCHHHHHHHHHHHHHHHHHHHHHEEEHHHHHHHHHHHHHHHHHHHHHHHHCCEEE
RLNIRAKVLVTLGNMFKRVVPYMWLYSFFAWIIMPRERHKKSRLLFVNEAKKVAQKEFMR
EEEEHEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCEEEEHHHHHHHHHHHHH
WFRLTYELTPLLKYFEEKDTAIPTLYLMGEEDHMFLPAVEYIITKHTNSWLQVIGNSGHV
HHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCEEHHHHHHHHHHCCCHHHHEECCCCCE
CNVDQPKEFNERAIAFLKKMSSVQQRTFEMEEYAAYAVV
ECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA