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The map label for this gene is 119357168

Identifier: 119357168

GI number: 119357168

Start: 1554210

End: 1554650

Strand: Reverse

Name: 119357168

Synonym: Cpha266_1357

Alternate gene names: NA

Gene position: 1554650-1554210 (Counterclockwise)

Preceding gene: 119357169

Following gene: 119357167

Centisome position: 49.61

GC content: 42.86

Gene sequence:

>441_bases
ATGGTCAAGGAAATAAAAACAGCTACCGATGTATTGGACGATATTTTCAGCCTTGCATACTGGATGACCGGAGGTGAGAG
AAAGGCAAAAGAGCTGGTATGTTGCACCTATATGAGTGCAGGTATTGATTCGTGTCTTACTGAACTGTTCAAGACGTTCA
GAGCCTGTTATTTTGAGCGTTATGGTAATGATTCATGTGGGTTTTTTTGCGGCAAACGCATCAATTCAAGGGTTAACGCT
GCGGATTTGCTTCGACAACGCTTCGCTGACATGAAGCTCTCGGTATTGTTGTCAGAAATTGCCGGATTAAAACATCGCGA
AATATCGGAAATAACCGAAACGTCACTTGAAACCGTTGGGTCGTGGTTATCCCGTGGCCGTAAATTATTTGTCAACGGAA
CCCTTTTCAGAGTATTTCCTTTGAGAGGTATATCCAGTTAA

Upstream 100 bases:

>100_bases
TATAATCGAGGGGCTTTGCGCGAAACGAGGGTTGAGGTCACTCGACTCGATCTGTTCCTGTGTTGATTACAATCAATGTT
AAAGGTATTTACAGAAACAC

Downstream 100 bases:

>100_bases
AATCGAGGAGTTGGTTCAATGAAAAAGCTTCGTATTGCTCAGATAGCCCCATTAGTAGAACGAGTTCCGCCAAAAAAATA
CGGGGGAACAGAAAGAGTCG

Product: ECF subfamily RNA polymerase sigma-24 factor

Products: NA

Alternate protein names: ECF Subfamily RNA Polymerase Sigma-24 Factor; ECF Subfamily RNA Polymerase Sigma-24 Subunit; Sigma-

Number of amino acids: Translated: 146; Mature: 146

Protein sequence:

>146_residues
MVKEIKTATDVLDDIFSLAYWMTGGERKAKELVCCTYMSAGIDSCLTELFKTFRACYFERYGNDSCGFFCGKRINSRVNA
ADLLRQRFADMKLSVLLSEIAGLKHREISEITETSLETVGSWLSRGRKLFVNGTLFRVFPLRGISS

Sequences:

>Translated_146_residues
MVKEIKTATDVLDDIFSLAYWMTGGERKAKELVCCTYMSAGIDSCLTELFKTFRACYFERYGNDSCGFFCGKRINSRVNA
ADLLRQRFADMKLSVLLSEIAGLKHREISEITETSLETVGSWLSRGRKLFVNGTLFRVFPLRGISS
>Mature_146_residues
MVKEIKTATDVLDDIFSLAYWMTGGERKAKELVCCTYMSAGIDSCLTELFKTFRACYFERYGNDSCGFFCGKRINSRVNA
ADLLRQRFADMKLSVLLSEIAGLKHREISEITETSLETVGSWLSRGRKLFVNGTLFRVFPLRGISS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16521; Mature: 16521

Theoretical pI: Translated: 8.60; Mature: 8.60

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.1 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
6.8 %Cys+Met (Translated Protein)
4.1 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
6.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVKEIKTATDVLDDIFSLAYWMTGGERKAKELVCCTYMSAGIDSCLTELFKTFRACYFER
CCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YGNDSCGFFCGKRINSRVNAADLLRQRFADMKLSVLLSEIAGLKHREISEITETSLETVG
HCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
SWLSRGRKLFVNGTLFRVFPLRGISS
HHHHCCCEEEECCCEEEEECCCCCCC
>Mature Secondary Structure
MVKEIKTATDVLDDIFSLAYWMTGGERKAKELVCCTYMSAGIDSCLTELFKTFRACYFER
CCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YGNDSCGFFCGKRINSRVNAADLLRQRFADMKLSVLLSEIAGLKHREISEITETSLETVG
HCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
SWLSRGRKLFVNGTLFRVFPLRGISS
HHHHCCCEEEECCCEEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA