| Definition | Chlorobium phaeobacteroides DSM 266 chromosome, complete genome. |
|---|---|
| Accession | NC_008639 |
| Length | 3,133,902 |
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The map label for this gene is 119357167
Identifier: 119357167
GI number: 119357167
Start: 1553070
End: 1554191
Strand: Reverse
Name: 119357167
Synonym: Cpha266_1356
Alternate gene names: NA
Gene position: 1554191-1553070 (Counterclockwise)
Preceding gene: 119357168
Following gene: 119357165
Centisome position: 49.59
GC content: 46.7
Gene sequence:
>1122_bases ATGAAAAAGCTTCGTATTGCTCAGATAGCCCCATTAGTAGAACGAGTTCCGCCAAAAAAATACGGGGGAACAGAAAGAGT CGTCTACCATCTGACTGAAGGGCTGGTACAAAAAGGTCACGACGTAACGCTGTTTGCATCAGGTGATTCCATAACCAGCG CAAGACTCATAGCACCGATCAGCGAAAGCCTTCGACTGGGAAGAAAAGTTCACACACCGGCCATCGTATCGATGATGATG TTGGGAACGGTTTATGAAAAAATGCTGCATGAATTCGATATTATTCACTCCCATCTTGAATACCTGACCCTGCCGTATGC CTACAAGACGCGAGTACCTACCGTTCTGACCATGCACGGGAGGCTCGATATAGGAGATTACGGGAAGTTGCTTGAGAGTT ATCCGGATATGGCGTATGTGTCTATCAGCGATTCCCAGAGGCGACCGGTGGAGGATATCAACTGGGTAAAGACGATTTAT CACGGATATCCGCCAGCGAGTTTCGAGTATAACGAGAATCCTGAAGATTATTTTCTTTATCTAGGTCGTTTTTCCGAAGA GAAAAAACCGGAACAGGCTATCATGCTGGCCAGGGCCTGTAATATCCGTTTGAAAATCGCTGCAAAAGTCGATCCGAGCG ACAAGGGTTACTTTGAGAAAAAAATCAGGCCCCTTCTTGATCATCCGCTGATCGAGTATGTCGGAGAAGTGGACGACTGC CGCAAAGTTGAGTTGCTGAAAAATGCAAAAGCGCTGCTCAATACCATAGACTGGCCGGAACCATTCGGACTTGTGATGAT CGAGGCTCTGGCGTGCGGAACCCCGGTTATTGTTCGCGGATGCGGATCGGCACCCGAGGTTATTGAACATGGTAAAACAG GATTCATTTGTGAAACCCGGCTCGACTTTATCAACGCCATTCATAATATTGAACAGCTATCCAGAAAGGTCTGTCGAGAG GAATTTGAACGACGTTTTTCGCTTGACTGTATGGTGGAAAGTTATGAAGAACTCTATTACAATCTGCTTCAGAAGAAGTC GCCTGTTGAAACGAGGCAAAGCAAGGCATTGCAGCTTTGGTCGGCTCCTTTAAAACAGAACAGAGTAACTGTTTCAGGGT GA
Upstream 100 bases:
>100_bases GTCGTGGTTATCCCGTGGCCGTAAATTATTTGTCAACGGAACCCTTTTCAGAGTATTTCCTTTGAGAGGTATATCCAGTT AAAATCGAGGAGTTGGTTCA
Downstream 100 bases:
>100_bases TAGTGAGCGTCGTTTTGAGATGATGCATAAAATATCCGGAATCAGCAGAACTTGTTTTCTGGTTCCGGGCTTGTTCAGGT TTCCCGAGTCGGGTGAAGCG
Product: glycosyl transferase, group 1
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 373; Mature: 373
Protein sequence:
>373_residues MKKLRIAQIAPLVERVPPKKYGGTERVVYHLTEGLVQKGHDVTLFASGDSITSARLIAPISESLRLGRKVHTPAIVSMMM LGTVYEKMLHEFDIIHSHLEYLTLPYAYKTRVPTVLTMHGRLDIGDYGKLLESYPDMAYVSISDSQRRPVEDINWVKTIY HGYPPASFEYNENPEDYFLYLGRFSEEKKPEQAIMLARACNIRLKIAAKVDPSDKGYFEKKIRPLLDHPLIEYVGEVDDC RKVELLKNAKALLNTIDWPEPFGLVMIEALACGTPVIVRGCGSAPEVIEHGKTGFICETRLDFINAIHNIEQLSRKVCRE EFERRFSLDCMVESYEELYYNLLQKKSPVETRQSKALQLWSAPLKQNRVTVSG
Sequences:
>Translated_373_residues MKKLRIAQIAPLVERVPPKKYGGTERVVYHLTEGLVQKGHDVTLFASGDSITSARLIAPISESLRLGRKVHTPAIVSMMM LGTVYEKMLHEFDIIHSHLEYLTLPYAYKTRVPTVLTMHGRLDIGDYGKLLESYPDMAYVSISDSQRRPVEDINWVKTIY HGYPPASFEYNENPEDYFLYLGRFSEEKKPEQAIMLARACNIRLKIAAKVDPSDKGYFEKKIRPLLDHPLIEYVGEVDDC RKVELLKNAKALLNTIDWPEPFGLVMIEALACGTPVIVRGCGSAPEVIEHGKTGFICETRLDFINAIHNIEQLSRKVCRE EFERRFSLDCMVESYEELYYNLLQKKSPVETRQSKALQLWSAPLKQNRVTVSG >Mature_373_residues MKKLRIAQIAPLVERVPPKKYGGTERVVYHLTEGLVQKGHDVTLFASGDSITSARLIAPISESLRLGRKVHTPAIVSMMM LGTVYEKMLHEFDIIHSHLEYLTLPYAYKTRVPTVLTMHGRLDIGDYGKLLESYPDMAYVSISDSQRRPVEDINWVKTIY HGYPPASFEYNENPEDYFLYLGRFSEEKKPEQAIMLARACNIRLKIAAKVDPSDKGYFEKKIRPLLDHPLIEYVGEVDDC RKVELLKNAKALLNTIDWPEPFGLVMIEALACGTPVIVRGCGSAPEVIEHGKTGFICETRLDFINAIHNIEQLSRKVCRE EFERRFSLDCMVESYEELYYNLLQKKSPVETRQSKALQLWSAPLKQNRVTVSG
Specific function: Unknown
COG id: COG0438
COG function: function code M; Glycosyltransferase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyltransferase 1 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001296 - InterPro: IPR013534 [H]
Pfam domain/function: PF08323 Glyco_transf_5; PF00534 Glycos_transf_1 [H]
EC number: NA
Molecular weight: Translated: 42598; Mature: 42598
Theoretical pI: Translated: 7.57; Mature: 7.57
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKLRIAQIAPLVERVPPKKYGGTERVVYHLTEGLVQKGHDVTLFASGDSITSARLIAPI CCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHH SESLRLGRKVHTPAIVSMMMLGTVYEKMLHEFDIIHSHLEYLTLPYAYKTRVPTVLTMHG HHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCEEEEECC RLDIGDYGKLLESYPDMAYVSISDSQRRPVEDINWVKTIYHGYPPASFEYNENPEDYFLY CCCCCHHHHHHHHCCCEEEEEECCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEE LGRFSEEKKPEQAIMLARACNIRLKIAAKVDPSDKGYFEKKIRPLLDHPLIEYVGEVDDC EECCCCCCCHHHHHHHHHHCCEEEEEEEECCCCCCCHHHHHHHHHHCCHHHHHHCCCCHH RKVELLKNAKALLNTIDWPEPFGLVMIEALACGTPVIVRGCGSAPEVIEHGKTGFICETR HHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCEEEECCCCCHHHHHCCCCCEEEHHH LDFINAIHNIEQLSRKVCREEFERRFSLDCMVESYEELYYNLLQKKSPVETRQSKALQLW HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH SAPLKQNRVTVSG HCHHHCCCEEECC >Mature Secondary Structure MKKLRIAQIAPLVERVPPKKYGGTERVVYHLTEGLVQKGHDVTLFASGDSITSARLIAPI CCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHH SESLRLGRKVHTPAIVSMMMLGTVYEKMLHEFDIIHSHLEYLTLPYAYKTRVPTVLTMHG HHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCEEEEECC RLDIGDYGKLLESYPDMAYVSISDSQRRPVEDINWVKTIYHGYPPASFEYNENPEDYFLY CCCCCHHHHHHHHCCCEEEEEECCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEE LGRFSEEKKPEQAIMLARACNIRLKIAAKVDPSDKGYFEKKIRPLLDHPLIEYVGEVDDC EECCCCCCCHHHHHHHHHHCCEEEEEEEECCCCCCCHHHHHHHHHHCCHHHHHHCCCCHH RKVELLKNAKALLNTIDWPEPFGLVMIEALACGTPVIVRGCGSAPEVIEHGKTGFICETR HHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCEEEECCCCCHHHHHCCCCCEEEHHH LDFINAIHNIEQLSRKVCREEFERRFSLDCMVESYEELYYNLLQKKSPVETRQSKALQLW HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH SAPLKQNRVTVSG HCHHHCCCEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]