| Definition | Chlorobium phaeobacteroides DSM 266 chromosome, complete genome. |
|---|---|
| Accession | NC_008639 |
| Length | 3,133,902 |
Click here to switch to the map view.
The map label for this gene is 119357044
Identifier: 119357044
GI number: 119357044
Start: 1397016
End: 1398449
Strand: Reverse
Name: 119357044
Synonym: Cpha266_1230
Alternate gene names: NA
Gene position: 1398449-1397016 (Counterclockwise)
Preceding gene: 119357045
Following gene: 119357043
Centisome position: 44.62
GC content: 54.46
Gene sequence:
>1434_bases ATGGGCAGCGAAATAGCAAAAACAGAGTTCAGCGAGGAGGATTTCCGGCAGTTTCACCAGAATCTGAGAAAGGAAACCCG GATTCTGATGGAATGGTTTTCCTCGGATCTCTTTGACAAACAGCAGGAGATGTGCGGCTTCGAACTCGAAGCATGGCTCG TCGATCAGCACTGTACTCCGACTGCCAGAAACGAGGAGTTCCTCCAGCGGGTCAACAATCCCCTGGTTGTGCCCGAGCTG TCGAAATACAACTTCGAACTCAATATTGCACCGCATCCGCTGGATAGCCATCTCCCGGAATTCCTGGACAAGGAACTCCG AAAACTCTGGAATATCTGCATCGTCAATGCACGTGACATGGGGTGCAATACCCTTATGATCGGCATCCCGCCGACGTTGC AGGACAGGATGCTGACGCTTCAGAACATCTCTTCGCTCCAAAGGTTTCATGCGCTGAACCGTGAAATCCTGCGATCGAGA TCTCGTCACCCGCTCAAAATACACATCGAAGGAACCCGTGATTCGCTGGAGGTCGTCCATCATGACGTAATGGCAGAGGC GGCCACAACATCGCTGCAGATCCACTTTCAGGTACCGATGAGCAAGGCGGCTTCCGTTTACAACATTGCCCATGTGCTAT CGGCACCGATGGTCGCACTCACCGCCAACTCTCCGTTCCTCTTCGGAAGGGAGCTGTGGGATGAGACACGCATTCCCCTG TTCGAGCAGGCCGTGAAAACCCCTGCATTTGTTGACCTCTCCGGAAGAGTAGTTTCGCGCGTCACATTCGGACGGGATTA CGTCCGTGAATCGCTCAAAGAGGTCTTCCTCGAAAATCTCGACGGATTTCCGGCGCTCCTGCCGGTCACCTTCGATCAGG ATTTCAACCAGCTTAACCATCTGCGGTTGCACAACGGAACCATCTGGCGCTGGAACCGCCCCCTGATAGGATTCGGTGAG GATGGTCGCCCTCATTTGCGGATCGAACATCGCGTCCCCCCTGCAGGACCATCGATTCCGGACATCGTAGCCAATATCCT CTTTTTTTATGGCGCGATCCTTCACCTGCAACCCGAAGTTCCGCAGGCTGCGATATCGTTCGAACAGGCTCGCTCCAACT TTTACGACGCTGCACGCTTCGGGCTTGACGCCAGGGTCAACTGGAGCTCAGGAAATGCCCTACCAGTGGCTACGCTTCTG CTGCAACAGTTGATCCCCGGAGCCATTCTGGCTCTTGCCGAACGTGGTTTCGACAGTCATGACCTCAGATACTACCTTGG CGATATTCTGGCAAGACGCGTAGCGACACGCCGGAACGGCGCCTGGTGGCAAAAAACTTTCATCAAGCGGCATGGCCCTG ATTTCAGGGCGATGACCCAGGCGTACCTCGAAAACCAGAGCCGAAACATTCCCGTACACGAATGGAGCATCTGA
Upstream 100 bases:
>100_bases ATCTTTTTACAACTGCATACAAATCATTTGCATCTGATCCTGCTATTATCCAGATTGTTCCTTATACCCTATACGTCAGA CCGACCATAACCAGTCATCG
Downstream 100 bases:
>100_bases ACCACAATCATCCGCCCGATCTTCACCTGTTCGATCGACTGCCCGACGGTTTCACCAGAATCGCGATCGAAAAACTCGGA TCGATCTTTCCTGGCCCGTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 477; Mature: 476
Protein sequence:
>477_residues MGSEIAKTEFSEEDFRQFHQNLRKETRILMEWFSSDLFDKQQEMCGFELEAWLVDQHCTPTARNEEFLQRVNNPLVVPEL SKYNFELNIAPHPLDSHLPEFLDKELRKLWNICIVNARDMGCNTLMIGIPPTLQDRMLTLQNISSLQRFHALNREILRSR SRHPLKIHIEGTRDSLEVVHHDVMAEAATTSLQIHFQVPMSKAASVYNIAHVLSAPMVALTANSPFLFGRELWDETRIPL FEQAVKTPAFVDLSGRVVSRVTFGRDYVRESLKEVFLENLDGFPALLPVTFDQDFNQLNHLRLHNGTIWRWNRPLIGFGE DGRPHLRIEHRVPPAGPSIPDIVANILFFYGAILHLQPEVPQAAISFEQARSNFYDAARFGLDARVNWSSGNALPVATLL LQQLIPGAILALAERGFDSHDLRYYLGDILARRVATRRNGAWWQKTFIKRHGPDFRAMTQAYLENQSRNIPVHEWSI
Sequences:
>Translated_477_residues MGSEIAKTEFSEEDFRQFHQNLRKETRILMEWFSSDLFDKQQEMCGFELEAWLVDQHCTPTARNEEFLQRVNNPLVVPEL SKYNFELNIAPHPLDSHLPEFLDKELRKLWNICIVNARDMGCNTLMIGIPPTLQDRMLTLQNISSLQRFHALNREILRSR SRHPLKIHIEGTRDSLEVVHHDVMAEAATTSLQIHFQVPMSKAASVYNIAHVLSAPMVALTANSPFLFGRELWDETRIPL FEQAVKTPAFVDLSGRVVSRVTFGRDYVRESLKEVFLENLDGFPALLPVTFDQDFNQLNHLRLHNGTIWRWNRPLIGFGE DGRPHLRIEHRVPPAGPSIPDIVANILFFYGAILHLQPEVPQAAISFEQARSNFYDAARFGLDARVNWSSGNALPVATLL LQQLIPGAILALAERGFDSHDLRYYLGDILARRVATRRNGAWWQKTFIKRHGPDFRAMTQAYLENQSRNIPVHEWSI >Mature_476_residues GSEIAKTEFSEEDFRQFHQNLRKETRILMEWFSSDLFDKQQEMCGFELEAWLVDQHCTPTARNEEFLQRVNNPLVVPELS KYNFELNIAPHPLDSHLPEFLDKELRKLWNICIVNARDMGCNTLMIGIPPTLQDRMLTLQNISSLQRFHALNREILRSRS RHPLKIHIEGTRDSLEVVHHDVMAEAATTSLQIHFQVPMSKAASVYNIAHVLSAPMVALTANSPFLFGRELWDETRIPLF EQAVKTPAFVDLSGRVVSRVTFGRDYVRESLKEVFLENLDGFPALLPVTFDQDFNQLNHLRLHNGTIWRWNRPLIGFGED GRPHLRIEHRVPPAGPSIPDIVANILFFYGAILHLQPEVPQAAISFEQARSNFYDAARFGLDARVNWSSGNALPVATLLL QQLIPGAILALAERGFDSHDLRYYLGDILARRVATRRNGAWWQKTFIKRHGPDFRAMTQAYLENQSRNIPVHEWSI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 54869; Mature: 54738
Theoretical pI: Translated: 6.83; Mature: 6.83
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGSEIAKTEFSEEDFRQFHQNLRKETRILMEWFSSDLFDKQQEMCGFELEAWLVDQHCTP CCCCCHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCC TARNEEFLQRVNNPLVVPELSKYNFELNIAPHPLDSHLPEFLDKELRKLWNICIVNARDM CCCCHHHHHHCCCCEEEECCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHEEECCCCC GCNTLMIGIPPTLQDRMLTLQNISSLQRFHALNREILRSRSRHPLKIHIEGTRDSLEVVH CCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCHHHHHHH HDVMAEAATTSLQIHFQVPMSKAASVYNIAHVLSAPMVALTANSPFLFGRELWDETRIPL HHHHHHHHCCEEEEEEECCHHHHHHHHHHHHHHHCCEEEEECCCCCEECHHHHHCCCCCH FEQAVKTPAFVDLSGRVVSRVTFGRDYVRESLKEVFLENLDGFPALLPVTFDQDFNQLNH HHHHHCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHCC LRLHNGTIWRWNRPLIGFGEDGRPHLRIEHRVPPAGPSIPDIVANILFFYGAILHLQPEV EEECCCEEEEECCCEEECCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHEECCCC PQAAISFEQARSNFYDAARFGLDARVNWSSGNALPVATLLLQQLIPGAILALAERGFDSH CHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCC DLRYYLGDILARRVATRRNGAWWQKTFIKRHGPDFRAMTQAYLENQSRNIPVHEWSI HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCCC >Mature Secondary Structure GSEIAKTEFSEEDFRQFHQNLRKETRILMEWFSSDLFDKQQEMCGFELEAWLVDQHCTP CCCCHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCC TARNEEFLQRVNNPLVVPELSKYNFELNIAPHPLDSHLPEFLDKELRKLWNICIVNARDM CCCCHHHHHHCCCCEEEECCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHEEECCCCC GCNTLMIGIPPTLQDRMLTLQNISSLQRFHALNREILRSRSRHPLKIHIEGTRDSLEVVH CCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCHHHHHHH HDVMAEAATTSLQIHFQVPMSKAASVYNIAHVLSAPMVALTANSPFLFGRELWDETRIPL HHHHHHHHCCEEEEEEECCHHHHHHHHHHHHHHHCCEEEEECCCCCEECHHHHHCCCCCH FEQAVKTPAFVDLSGRVVSRVTFGRDYVRESLKEVFLENLDGFPALLPVTFDQDFNQLNH HHHHHCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHCC LRLHNGTIWRWNRPLIGFGEDGRPHLRIEHRVPPAGPSIPDIVANILFFYGAILHLQPEV EEECCCEEEEECCCEEECCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHEECCCC PQAAISFEQARSNFYDAARFGLDARVNWSSGNALPVATLLLQQLIPGAILALAERGFDSH CHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCC DLRYYLGDILARRVATRRNGAWWQKTFIKRHGPDFRAMTQAYLENQSRNIPVHEWSI HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA